RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CD164Q04900 197 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 TRAV13-2A0A0B4J235 113 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 H3BT86 120 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 C9orf116Q5BN46 136 aaPredicted RBP5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 LELP1Q5T871 98 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 UBE2WQ96B02 151 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 TRAV8-4A0A0B4J246 113 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 FAM236DA0A1B0GTK5 79 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 FAM236CP0DP71 79 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 SMIM11BQ8TCY0 68 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 RPL28P46779 137 aaKnown RBP5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 KLK12Q9UKR0 248 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 NOTCH1P46531 2555 aa5.41□□□□□ -1.54
PDLIM5-204ENST00000380176 SNCGO76070 127 aa5.4□□□□□ -1.54
PDLIM5-204ENST00000380176 PRR3P79522 188 aaKnown RBP5.4□□□□□ -1.54
PDLIM5-204ENST00000380176 LYPD5Q6UWN5 251 aa5.4□□□□□ -1.54
PDLIM5-204ENST00000380176 DNAH3Q8TD57 4116 aa5.4□□□□□ -1.54
PDLIM5-204ENST00000380176 C6orf223Q8N319 242 aa5.4□□□□□ -1.55
PDLIM5-204ENST00000380176 C3orf22Q8N5N4 141 aa5.4□□□□□ -1.55
PDLIM5-204ENST00000380176 C3orf56Q8N813 242 aa5.4□□□□□ -1.55
PDLIM5-204ENST00000380176 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 ENHOQ6UWT2 76 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 Q6ZTC4 211 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 Q9HAA7 133 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 C22orf24Q9Y442 160 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 UQCRQO14949 82 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 C10orf25Q5T742 122 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 PRR34Q9NV39 138 aa5.39□□□□□ -1.55
PDLIM5-204ENST00000380176 A0A087WYN8 130 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 TRACP01848 142 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 C9orf153Q5TBE3 101 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 DPH3Q96FX2 82 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 COL6A5A8TX70 2615 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 KPRPQ5T749 579 aaPredicted RBP5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 WFDC10BQ8IUB3 73 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 Q8NDZ9 215 aa5.38□□□□□ -1.55
PDLIM5-204ENST00000380176 FAM236AA0A1B0GUQ0 79 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 FAM236BA0A1B0GV22 79 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 UNQ6190/PRO20217Q6UXQ8 127 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 CYSRT1A8MQ03 144 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 BAALC-AS2P0C853 105 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 TMEM258P61165 79 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 A0A0J9YWU9 116 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 DEFB121Q5J5C9 76 aa5.37□□□□□ -1.55
PDLIM5-204ENST00000380176 NANOS2P60321 138 aaKnown RBP5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 KLK5Q9Y337 293 aaPredicted RBP5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 BAHCC1Q9P281 2608 aa5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 CXCL5P42830 114 aa5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 COX17Q14061 63 aa5.36□□□□□ -1.55
PDLIM5-204ENST00000380176 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
PDLIM5-204ENST00000380176 PRB2P02812 416 aaPredicted RBP5.35□□□□□ -1.55
PDLIM5-204ENST00000380176 CRYGAP11844 174 aa5.35□□□□□ -1.55
PDLIM5-204ENST00000380176 ESRGQ1W209 222 aa5.35□□□□□ -1.55
PDLIM5-204ENST00000380176 C11orf45Q8TAV5 145 aa5.35□□□□□ -1.55
PDLIM5-204ENST00000380176 C9orf129Q5T035 196 aaKnown RBP5.34□□□□□ -1.55
PDLIM5-204ENST00000380176 H3BNG1 76 aa5.34□□□□□ -1.55
PDLIM5-204ENST00000380176 LECT2O14960 151 aa5.34□□□□□ -1.55
PDLIM5-204ENST00000380176 NCR3O14931 201 aa5.34□□□□□ -1.56
PDLIM5-204ENST00000380176 NDUFC2O95298 119 aa5.34□□□□□ -1.56
PDLIM5-204ENST00000380176 SLPIP03973 132 aa5.34□□□□□ -1.56
PDLIM5-204ENST00000380176 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.56
PDLIM5-204ENST00000380176 H0YGX0 51 aa5.33□□□□□ -1.56
PDLIM5-204ENST00000380176 GAGE2AQ6NT46 116 aa5.33□□□□□ -1.56
PDLIM5-204ENST00000380176 C15orf53Q8NAA6 179 aa5.33□□□□□ -1.56
PDLIM5-204ENST00000380176 KRTAP26-1Q6PEX3 210 aa5.33□□□□□ -1.56
PDLIM5-204ENST00000380176 DEFB131BA0A096LNP1 70 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 PMAIP1Q13794 54 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 DNAL4O96015 105 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 HIGD2BQ4VC39 106 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 C6orf48Q9UBA6 75 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 TRBV7-7A0A0K0K1E9 115 aa5.32□□□□□ -1.56
PDLIM5-204ENST00000380176 FAM240AA0A1B0GVK7 77 aa5.31□□□□□ -1.56
PDLIM5-204ENST00000380176 PRR26Q8N8Z3 221 aa5.31□□□□□ -1.56
PDLIM5-204ENST00000380176 C2orf48Q96LS8 159 aa5.31□□□□□ -1.56
PDLIM5-204ENST00000380176 IMUPQ9GZP8 106 aa5.31□□□□□ -1.56
PDLIM5-204ENST00000380176 EPM2AB3EWF7 344 aa5.3□□□□□ -1.56
PDLIM5-204ENST00000380176 XAGE1AQ9HD64 81 aa5.3□□□□□ -1.56
PDLIM5-204ENST00000380176 SMCR5Q8TEV8 140 aa5.3□□□□□ -1.56
PDLIM5-204ENST00000380176 GVQW2A0A096LPI5 108 aaPredicted RBP5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 C6orf99Q4VX62 202 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 C15orf56Q8N910 161 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 RPL18AQ02543 176 aaKnown RBP5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 COX7CP15954 63 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 S100A7L2Q5SY68 101 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 C14orf132Q9NPU4 83 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 DNAH1Q9P2D7 4330 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 LYSTQ99698 3801 aa5.29□□□□□ -1.56
PDLIM5-204ENST00000380176 Q8N814 137 aa5.28□□□□□ -1.56
PDLIM5-204ENST00000380176 Q6ZRU5 148 aa5.28□□□□□ -1.56
PDLIM5-204ENST00000380176 CAMK2N2Q96S95 79 aa5.28□□□□□ -1.56
PDLIM5-204ENST00000380176 MGAM2Q2M2H8 2515 aa5.28□□□□□ -1.56
PDLIM5-204ENST00000380176 LINC01556Q5JQF7 62 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 LINC00167Q96N53 147 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 IGKV2D-24A0A075B6R9 120 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 K7EIL1 84 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 IGLV6-57P01721 117 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 INAFM2P0DMQ5 153 aa5.27□□□□□ -1.57
PDLIM5-204ENST00000380176 OBSCN-AS1Q96MR7 158 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms