RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 C16orf90A8MZG2 172 aa8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 LINC00242Q5T6M2 205 aa8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 SPACA4Q8TDM5 124 aa8.05□□□□□ -1.12
PTCHD1-201ENST00000379361 NSD1Q96L73 2696 aaPredicted RBP8.04□□□□□ -1.12
PTCHD1-201ENST00000379361 C1orf229Q6ZS94 237 aaPredicted RBP8.04□□□□□ -1.12
PTCHD1-201ENST00000379361 A0A1W2PNU3 283 aaPredicted RBP8.04□□□□□ -1.12
PTCHD1-201ENST00000379361 TRAV22A0A0B4J277 110 aa8.04□□□□□ -1.12
PTCHD1-201ENST00000379361 POLR2KP53803 58 aaKnown RBP8.03□□□□□ -1.12
PTCHD1-201ENST00000379361 IGLV1-51P01701 117 aa8.02□□□□□ -1.12
PTCHD1-201ENST00000379361 PRM2P04554 102 aa8.02□□□□□ -1.13
PTCHD1-201ENST00000379361 C16orf95Q9H693 158 aa8.02□□□□□ -1.13
PTCHD1-201ENST00000379361 A0A087WYN8 130 aa8.01□□□□□ -1.13
PTCHD1-201ENST00000379361 CNFNQ9BYD5 112 aa8.01□□□□□ -1.13
PTCHD1-201ENST00000379361 TYMSOSQ8TAI1 123 aa8.01□□□□□ -1.13
PTCHD1-201ENST00000379361 TMEM254Q8TBM7 123 aa8.01□□□□□ -1.13
PTCHD1-201ENST00000379361 DEFB116Q30KQ4 102 aa8.01□□□□□ -1.13
PTCHD1-201ENST00000379361 C8orf87E5RJ46 101 aa8□□□□□ -1.13
PTCHD1-201ENST00000379361 FHL2Q14192 279 aa8□□□□□ -1.13
PTCHD1-201ENST00000379361 LYPD5Q6UWN5 251 aa8□□□□□ -1.13
PTCHD1-201ENST00000379361 C11orf1Q9H5F2 150 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 SMR3AQ99954 134 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 MDFIQ99750 246 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 FHL3Q13643 280 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 PRR9Q5T870 116 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 MUC22E2RYF6 1773 aaPredicted RBP7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 Q8N6K4 173 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 LINC00313P59037 77 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 Q6ZS46 218 aa7.99□□□□□ -1.13
PTCHD1-201ENST00000379361 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
PTCHD1-201ENST00000379361 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
PTCHD1-201ENST00000379361 Q6ZRP5 223 aa7.98□□□□□ -1.13
PTCHD1-201ENST00000379361 IGLV4-60A0A075B6I1 120 aa7.97□□□□□ -1.13
PTCHD1-201ENST00000379361 SMIM1B2RUZ4 78 aa7.97□□□□□ -1.13
PTCHD1-201ENST00000379361 H3BPC8 53 aa7.96□□□□□ -1.13
PTCHD1-201ENST00000379361 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.14
PTCHD1-201ENST00000379361 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
PTCHD1-201ENST00000379361 ODF3L2Q3SX64 289 aa7.95□□□□□ -1.14
PTCHD1-201ENST00000379361 Q8NBF4 154 aa7.95□□□□□ -1.14
PTCHD1-201ENST00000379361 A0A1B0GW54 56 aa7.95□□□□□ -1.14
PTCHD1-201ENST00000379361 KIF25-AS1Q9Y6Z4 181 aa7.95□□□□□ -1.14
PTCHD1-201ENST00000379361 C2orf91Q6ZV80 131 aa7.94□□□□□ -1.14
PTCHD1-201ENST00000379361 PRR3P79522 188 aaKnown RBP7.94□□□□□ -1.14
PTCHD1-201ENST00000379361 APCP25054 2843 aa7.94□□□□□ -1.14
PTCHD1-201ENST00000379361 TRANK1O15050 2925 aa7.93□□□□□ -1.14
PTCHD1-201ENST00000379361 CRIPTQ9P021 101 aa7.93□□□□□ -1.14
PTCHD1-201ENST00000379361 IGLV8-61A0A075B6I0 122 aa7.92□□□□□ -1.14
PTCHD1-201ENST00000379361 FLNCQ14315 2725 aa7.92□□□□□ -1.14
PTCHD1-201ENST00000379361 AMELXQ99217 191 aa7.91□□□□□ -1.14
PTCHD1-201ENST00000379361 SMIM29Q86T20 159 aa7.91□□□□□ -1.14
PTCHD1-201ENST00000379361 SSBP3-AS1Q7Z2R9 100 aa7.91□□□□□ -1.14
PTCHD1-201ENST00000379361 DSPP15924 2871 aaKnown RBP7.9□□□□□ -1.14
PTCHD1-201ENST00000379361 KIAA0087Q14695 138 aa7.9□□□□□ -1.14
PTCHD1-201ENST00000379361 RPL37AP61513 92 aaKnown RBP7.9□□□□□ -1.14
PTCHD1-201ENST00000379361 IGSF10Q6WRI0 2623 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 Q9UF83 564 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 Q6ZRU5 148 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 COL4A3Q01955 1670 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 Q96NJ1 140 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 C11orf21Q9P2W6 132 aa7.89□□□□□ -1.15
PTCHD1-201ENST00000379361 RTL8CO15255 209 aa7.88□□□□□ -1.15
PTCHD1-201ENST00000379361 BRWD1-AS2P59051 145 aa7.88□□□□□ -1.15
PTCHD1-201ENST00000379361 A0A087WVE0 104 aa7.87□□□□□ -1.15
PTCHD1-201ENST00000379361 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
PTCHD1-201ENST00000379361 A8MTW9 85 aa7.85□□□□□ -1.15
PTCHD1-201ENST00000379361 APLNQ9ULZ1 77 aa7.85□□□□□ -1.15
PTCHD1-201ENST00000379361 CHTF8P0CG12 524 aa7.84□□□□□ -1.15
PTCHD1-201ENST00000379361 LINC00846Q9NV44 126 aa7.83□□□□□ -1.16
PTCHD1-201ENST00000379361 ZNF580Q9UK33 172 aa7.83□□□□□ -1.16
PTCHD1-201ENST00000379361 NBDYA0A0U1RRE5 68 aa7.83□□□□□ -1.16
PTCHD1-201ENST00000379361 WISP2O76076 250 aa7.83□□□□□ -1.16
PTCHD1-201ENST00000379361 ZNF295-AS1Q8N0V1 137 aa7.83□□□□□ -1.16
PTCHD1-201ENST00000379361 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
PTCHD1-201ENST00000379361 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
PTCHD1-201ENST00000379361 LOC101927531A0A1B0GV80 90 aa7.82□□□□□ -1.16
PTCHD1-201ENST00000379361 C11orf72Q8NBR9 251 aa7.82□□□□□ -1.16
PTCHD1-201ENST00000379361 PRO0628Q9UI54 55 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 Q6ZRX8 168 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 TSPEAR-AS2P59090 65 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 LUZP6Q538Z0 58 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 Q6ZPA2 131 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 AVPP01185 164 aa7.81□□□□□ -1.16
PTCHD1-201ENST00000379361 WWC2-AS2Q96NR7 200 aa7.8□□□□□ -1.16
PTCHD1-201ENST00000379361 LINC00304Q8N9R0 145 aa7.8□□□□□ -1.16
PTCHD1-201ENST00000379361 CDIP1Q9H305 208 aa7.8□□□□□ -1.16
PTCHD1-201ENST00000379361 LAMA2P24043 3122 aaKnown RBP7.8□□□□□ -1.16
PTCHD1-201ENST00000379361 SPATA3Q8NHX4 192 aa7.8□□□□□ -1.16
PTCHD1-201ENST00000379361 GAS8-AS1O95177 125 aa7.79□□□□□ -1.16
PTCHD1-201ENST00000379361 NBEAL2Q6ZNJ1 2754 aa7.79□□□□□ -1.16
PTCHD1-201ENST00000379361 H3BNG1 76 aa7.79□□□□□ -1.16
PTCHD1-201ENST00000379361 BCE1O60756 84 aa7.79□□□□□ -1.16
PTCHD1-201ENST00000379361 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
PTCHD1-201ENST00000379361 UQCR11O14957 56 aa7.78□□□□□ -1.16
PTCHD1-201ENST00000379361 A8MWP4 228 aa7.77□□□□□ -1.17
PTCHD1-201ENST00000379361 Q6ZSN1 163 aa7.77□□□□□ -1.17
PTCHD1-201ENST00000379361 PHF5AQ7RTV0 110 aaKnown RBP7.76□□□□□ -1.17
PTCHD1-201ENST00000379361 LINC00315P59091 139 aa7.76□□□□□ -1.17
PTCHD1-201ENST00000379361 LINC01600Q96MT4 127 aa7.76□□□□□ -1.17
PTCHD1-201ENST00000379361 LINC00476Q8WZB0 136 aa7.76□□□□□ -1.17
PTCHD1-201ENST00000379361 KRTAP10-9P60411 292 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms