RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 DIRC1Q969H9 104 aa11.47□□□□□ -0.57
TMEM88B-201ENST00000378821 SND1-IT1Q9HBX3 110 aa11.47□□□□□ -0.57
TMEM88B-201ENST00000378821 TP73-AS1Q9UF72 201 aa11.47□□□□□ -0.57
TMEM88B-201ENST00000378821 LEPROTO15243 131 aa11.46□□□□□ -0.57
TMEM88B-201ENST00000378821 IGLV5-37A0A075B6J1 123 aa11.45□□□□□ -0.58
TMEM88B-201ENST00000378821 MRPL55Q7Z7F7 128 aaKnown RBP11.45□□□□□ -0.58
TMEM88B-201ENST00000378821 NDUFA12Q9UI09 145 aa11.45□□□□□ -0.58
TMEM88B-201ENST00000378821 A0A0U1RRA0 63 aa11.44□□□□□ -0.58
TMEM88B-201ENST00000378821 H0Y9J4 135 aa11.44□□□□□ -0.58
TMEM88B-201ENST00000378821 HERVK_113P61574 105 aa11.44□□□□□ -0.58
TMEM88B-201ENST00000378821 LBHQ53QV2 105 aaPredicted RBP11.44□□□□□ -0.58
TMEM88B-201ENST00000378821 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
TMEM88B-201ENST00000378821 C3orf79P0CE67 100 aa11.43□□□□□ -0.58
TMEM88B-201ENST00000378821 LINC00158P58513 81 aa11.43□□□□□ -0.58
TMEM88B-201ENST00000378821 LINC01545Q5VT33 79 aa11.43□□□□□ -0.58
TMEM88B-201ENST00000378821 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 J3QQQ9 107 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 SMIM13P0DJ93 91 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 HERV-K104P63124 156 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 MEIG1Q5JSS6 88 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
TMEM88B-201ENST00000378821 VPREB1P12018 145 aa11.41□□□□□ -0.58
TMEM88B-201ENST00000378821 NKAPP1Q8N9T2 125 aa11.41□□□□□ -0.58
TMEM88B-201ENST00000378821 Q8NDZ9 215 aa11.41□□□□□ -0.58
TMEM88B-201ENST00000378821 GAGE10A6NGK3 116 aa11.4□□□□□ -0.58
TMEM88B-201ENST00000378821 KRTAP1-4P0C5Y4 121 aa11.4□□□□□ -0.58
TMEM88B-201ENST00000378821 RPL37AP8A6NKH3 93 aa11.39□□□□□ -0.59
TMEM88B-201ENST00000378821 KRTDAPP60985 99 aa11.39□□□□□ -0.59
TMEM88B-201ENST00000378821 E9PLD3 99 aa11.38□□□□□ -0.59
TMEM88B-201ENST00000378821 LGALS3P17931 250 aaKnown RBP11.38□□□□□ -0.59
TMEM88B-201ENST00000378821 MIR7-3HGQ8N6C7 128 aa11.38□□□□□ -0.59
TMEM88B-201ENST00000378821 PRR26Q8N8Z3 221 aa11.38□□□□□ -0.59
TMEM88B-201ENST00000378821 IGLV1-50A0A075B6I6 118 aa11.36□□□□□ -0.59
TMEM88B-201ENST00000378821 NMUP48645 174 aa11.36□□□□□ -0.59
TMEM88B-201ENST00000378821 RPL24P83731 157 aaKnown RBP11.36□□□□□ -0.59
TMEM88B-201ENST00000378821 LINC00587B1AMM8 73 aa11.35□□□□□ -0.59
TMEM88B-201ENST00000378821 IGKV2-28A0A075B6P5 120 aa11.33□□□□□ -0.6
TMEM88B-201ENST00000378821 IGKV2D-28P01615 120 aa11.33□□□□□ -0.6
TMEM88B-201ENST00000378821 HIST3H2BBQ8N257 126 aa11.33□□□□□ -0.6
TMEM88B-201ENST00000378821 DAND5Q8N907 189 aa11.33□□□□□ -0.6
TMEM88B-201ENST00000378821 ZNF861PO60384 105 aa11.32□□□□□ -0.6
TMEM88B-201ENST00000378821 BCE1O60756 84 aa11.32□□□□□ -0.6
TMEM88B-201ENST00000378821 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
TMEM88B-201ENST00000378821 C20orf202A1L168 122 aa11.31□□□□□ -0.6
TMEM88B-201ENST00000378821 BOD1L2Q8IYS8 172 aa11.31□□□□□ -0.6
TMEM88B-201ENST00000378821 IGKV2D-26A0A0A0MRZ7 120 aa11.3□□□□□ -0.6
TMEM88B-201ENST00000378821 HIST1H2BLQ99880 126 aa11.3□□□□□ -0.6
TMEM88B-201ENST00000378821 A0A0J9YXY3 114 aa11.29□□□□□ -0.6
TMEM88B-201ENST00000378821 S100A6P06703 90 aa11.28□□□□□ -0.6
TMEM88B-201ENST00000378821 S100A2P29034 98 aa11.28□□□□□ -0.6
TMEM88B-201ENST00000378821 RPL13AP40429 203 aaKnown RBP11.28□□□□□ -0.6
TMEM88B-201ENST00000378821 ATOH7Q8N100 152 aa11.28□□□□□ -0.6
TMEM88B-201ENST00000378821 TMEM238C9JI98 176 aa11.27□□□□□ -0.61
TMEM88B-201ENST00000378821 M0R378 163 aa11.27□□□□□ -0.61
TMEM88B-201ENST00000378821 NCR3O14931 201 aa11.27□□□□□ -0.61
TMEM88B-201ENST00000378821 TTTY13Q9BZ97 58 aa11.27□□□□□ -0.61
TMEM88B-201ENST00000378821 LOC107984156A0A0G2JMH3 177 aa11.26□□□□□ -0.61
TMEM88B-201ENST00000378821 ARL17AQ8IVW1 177 aa11.26□□□□□ -0.61
TMEM88B-201ENST00000378821 TMEM126AQ9H061 195 aa11.26□□□□□ -0.61
TMEM88B-201ENST00000378821 ZNF815PA8K554 130 aa11.25□□□□□ -0.61
TMEM88B-201ENST00000378821 RPL28P46779 137 aaKnown RBP11.25□□□□□ -0.61
TMEM88B-201ENST00000378821 ANKRD39Q53RE8 183 aa11.25□□□□□ -0.61
TMEM88B-201ENST00000378821 ADAMTSL4-AS1Q5T5F5 129 aa11.25□□□□□ -0.61
TMEM88B-201ENST00000378821 KRTAP13-1Q8IUC0 172 aa11.25□□□□□ -0.61
TMEM88B-201ENST00000378821 UBE2AP49459 152 aa11.23□□□□□ -0.61
TMEM88B-201ENST00000378821 SNRPEP62304 92 aaKnown RBP11.23□□□□□ -0.61
TMEM88B-201ENST00000378821 SOSTDC1Q6X4U4 206 aa11.23□□□□□ -0.61
TMEM88B-201ENST00000378821 LITAFQ99732 161 aa11.23□□□□□ -0.61
TMEM88B-201ENST00000378821 EIF4EBP3O60516 100 aaPredicted RBP11.22□□□□□ -0.61
TMEM88B-201ENST00000378821 NPC2P61916 151 aa11.22□□□□□ -0.61
TMEM88B-201ENST00000378821 MIEN1Q9BRT3 115 aa11.22□□□□□ -0.61
TMEM88B-201ENST00000378821 AKR1D1P51857 326 aa11.21□□□□□ -0.61
TMEM88B-201ENST00000378821 PRLHP81277 87 aa11.21□□□□□ -0.61
TMEM88B-201ENST00000378821 FAM19A1Q7Z5A9 133 aa11.21□□□□□ -0.61
TMEM88B-201ENST00000378821 LPAP08519 4548 aa11.21□□□□□ -0.62
TMEM88B-201ENST00000378821 TIMM17BO60830 172 aa11.2□□□□□ -0.62
TMEM88B-201ENST00000378821 TRBV10-3A0A0K0K1G6 114 aa11.19□□□□□ -0.62
TMEM88B-201ENST00000378821 C5orf52A6NGY3 159 aa11.18□□□□□ -0.62
TMEM88B-201ENST00000378821 PRYO14603 147 aa11.18□□□□□ -0.62
TMEM88B-201ENST00000378821 SPANXB1Q9NS25 103 aaPredicted RBP11.18□□□□□ -0.62
TMEM88B-201ENST00000378821 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
TMEM88B-201ENST00000378821 NDUFC2O95298 119 aa11.17□□□□□ -0.62
TMEM88B-201ENST00000378821 KCNQ1DNQ9H478 68 aa11.17□□□□□ -0.62
TMEM88B-201ENST00000378821 A0A087X002 238 aa11.16□□□□□ -0.62
TMEM88B-201ENST00000378821 PCP2Q8IVA1 136 aa11.16□□□□□ -0.62
TMEM88B-201ENST00000378821 LINC00308Q8TCZ7 52 aa11.16□□□□□ -0.62
TMEM88B-201ENST00000378821 SPRR1AP35321 89 aa11.15□□□□□ -0.62
TMEM88B-201ENST00000378821 DDTP30046 118 aa11.14□□□□□ -0.63
TMEM88B-201ENST00000378821 SCGB1D4Q6XE38 83 aa11.13□□□□□ -0.63
TMEM88B-201ENST00000378821 KRTAP4-16G5E9R7 235 aaPredicted RBP11.12□□□□□ -0.63
TMEM88B-201ENST00000378821 CRYGAP11844 174 aa11.12□□□□□ -0.63
TMEM88B-201ENST00000378821 LINC00337Q8N6G1 96 aa11.12□□□□□ -0.63
TMEM88B-201ENST00000378821 IGLV6-57P01721 117 aa11.11□□□□□ -0.63
TMEM88B-201ENST00000378821 SPANXDQ9BXN6 97 aa11.11□□□□□ -0.63
TMEM88B-201ENST00000378821 SPANXCQ9NY87 97 aa11.11□□□□□ -0.63
TMEM88B-201ENST00000378821 S100A7L2Q5SY68 101 aa11.1□□□□□ -0.63
TMEM88B-201ENST00000378821 HIGD2AQ9BW72 106 aa11.1□□□□□ -0.63
TMEM88B-201ENST00000378821 ETDCA0A1B0GVM5 59 aa11.09□□□□□ -0.63
TMEM88B-201ENST00000378821 HSBP1L1C9JCN9 74 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms