RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 C9orf153Q5TBE3 101 aa12.24□□□□□ -0.45
TDP2-202ENST00000378198 COX7CP15954 63 aa12.23□□□□□ -0.45
TDP2-202ENST00000378198 RPL18AQ02543 176 aaKnown RBP12.23□□□□□ -0.45
TDP2-202ENST00000378198 NBEAL2Q6ZNJ1 2754 aa12.23□□□□□ -0.45
TDP2-202ENST00000378198 C6orf48Q9UBA6 75 aa12.22□□□□□ -0.45
TDP2-202ENST00000378198 FASNP49327 2511 aaKnown RBP12.22□□□□□ -0.45
TDP2-202ENST00000378198 H3BNG1 76 aa12.21□□□□□ -0.45
TDP2-202ENST00000378198 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
TDP2-202ENST00000378198 KMT2BQ9UMN6 2715 aaPredicted RBP12.21□□□□□ -0.46
TDP2-202ENST00000378198 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
TDP2-202ENST00000378198 ATP5EP2Q5VTU8 51 aa12.2□□□□□ -0.46
TDP2-202ENST00000378198 H3BQ85 93 aa12.19□□□□□ -0.46
TDP2-202ENST00000378198 RBM3P98179 157 aaKnown RBP12.18□□□□□ -0.46
TDP2-202ENST00000378198 C3orf56Q8N813 242 aa12.18□□□□□ -0.46
TDP2-202ENST00000378198 VWFP04275 2813 aa12.17□□□□□ -0.46
TDP2-202ENST00000378198 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
TDP2-202ENST00000378198 HELZ2Q9BYK8 2649 aaKnown RBP12.16□□□□□ -0.46
TDP2-202ENST00000378198 TRAV23DV6A0A075B6W5 121 aa12.16□□□□□ -0.46
TDP2-202ENST00000378198 A0A087WVE0 104 aa12.16□□□□□ -0.46
TDP2-202ENST00000378198 TRBV10-3A0A0K0K1G6 114 aa12.16□□□□□ -0.46
TDP2-202ENST00000378198 WFDC10BQ8IUB3 73 aa12.16□□□□□ -0.46
TDP2-202ENST00000378198 DIRC1Q969H9 104 aa12.16□□□□□ -0.46
TDP2-202ENST00000378198 LOC110117498A0A087WWA1 95 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 Q6ZQT0 140 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 UBL5Q9BZL1 73 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 XAGE1AQ9HD64 81 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 CRYGAP11844 174 aa12.15□□□□□ -0.46
TDP2-202ENST00000378198 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
TDP2-202ENST00000378198 Q6ZQY7 126 aa12.14□□□□□ -0.47
TDP2-202ENST00000378198 USP17L23D6RBM5 183 aa12.13□□□□□ -0.47
TDP2-202ENST00000378198 KRTAP26-1Q6PEX3 210 aa12.13□□□□□ -0.47
TDP2-202ENST00000378198 EGFEM1PQ0D2K5 195 aa12.12□□□□□ -0.47
TDP2-202ENST00000378198 SMIM20Q8N5G0 67 aa12.12□□□□□ -0.47
TDP2-202ENST00000378198 SERP2Q8N6R1 65 aa12.12□□□□□ -0.47
TDP2-202ENST00000378198 NOTCH2Q04721 2471 aa12.12□□□□□ -0.47
TDP2-202ENST00000378198 HIGD2BQ4VC39 106 aa12.12□□□□□ -0.47
TDP2-202ENST00000378198 TRBV7-6A0A0J9YX20 115 aa12.11□□□□□ -0.47
TDP2-202ENST00000378198 ZNF73O43830 326 aaPredicted RBP12.11□□□□□ -0.47
TDP2-202ENST00000378198 RETNQ9HD89 108 aa12.11□□□□□ -0.47
TDP2-202ENST00000378198 GHRHP01286 108 aa12.1□□□□□ -0.47
TDP2-202ENST00000378198 PDE6GP18545 87 aa12.1□□□□□ -0.47
TDP2-202ENST00000378198 VPREB1P12018 145 aa12.1□□□□□ -0.47
TDP2-202ENST00000378198 COX7BP24311 80 aa12.1□□□□□ -0.47
TDP2-202ENST00000378198 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.1□□□□□ -0.47
TDP2-202ENST00000378198 DSCR8Q96T75 97 aa12.1□□□□□ -0.47
TDP2-202ENST00000378198 OXLD1Q5BKU9 147 aa12.09□□□□□ -0.47
TDP2-202ENST00000378198 Q6ZTC4 211 aa12.09□□□□□ -0.47
TDP2-202ENST00000378198 M0R378 163 aa12.08□□□□□ -0.48
TDP2-202ENST00000378198 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
TDP2-202ENST00000378198 KRTAP10-11P60412 298 aa12.08□□□□□ -0.48
TDP2-202ENST00000378198 Q6ZRU5 148 aa12.08□□□□□ -0.48
TDP2-202ENST00000378198 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
TDP2-202ENST00000378198 ESRGQ1W209 222 aa12.07□□□□□ -0.48
TDP2-202ENST00000378198 NSD1Q96L73 2696 aaPredicted RBP12.06□□□□□ -0.48
TDP2-202ENST00000378198 NDUFC2-KCTD14E9PQ53 114 aa12.06□□□□□ -0.48
TDP2-202ENST00000378198 F8WDY8 70 aa12.06□□□□□ -0.48
TDP2-202ENST00000378198 OTOGQ6ZRI0 2925 aa12.05□□□□□ -0.48
TDP2-202ENST00000378198 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
TDP2-202ENST00000378198 C1orf43Q9BWL3 253 aa12.05□□□□□ -0.48
TDP2-202ENST00000378198 TENM1Q9UKZ4 2725 aa12.05□□□□□ -0.48
TDP2-202ENST00000378198 M0R2N4 97 aa12.03□□□□□ -0.48
TDP2-202ENST00000378198 LINC01556Q5JQF7 62 aa12.03□□□□□ -0.48
TDP2-202ENST00000378198 UPK3BQ9BT76 320 aa12.03□□□□□ -0.48
TDP2-202ENST00000378198 TEP1Q99973 2627 aaKnown RBP12.02□□□□□ -0.49
TDP2-202ENST00000378198 SVIPQ8NHG7 77 aa12.01□□□□□ -0.49
TDP2-202ENST00000378198 TRBV7-4A0A0J9YYF1 115 aa12.01□□□□□ -0.49
TDP2-202ENST00000378198 Q6ZVQ6 151 aa12.01□□□□□ -0.49
TDP2-202ENST00000378198 DEFB131BA0A096LNP1 70 aa11.99□□□□□ -0.49
TDP2-202ENST00000378198 LINC01547P58512 204 aaPredicted RBP11.99□□□□□ -0.49
TDP2-202ENST00000378198 LINC00528Q8N1L1 170 aa11.99□□□□□ -0.49
TDP2-202ENST00000378198 IGKV2D-24A0A075B6R9 120 aa11.99□□□□□ -0.49
TDP2-202ENST00000378198 Q6ZRP5 223 aa11.98□□□□□ -0.49
TDP2-202ENST00000378198 C11orf45Q8TAV5 145 aa11.98□□□□□ -0.49
TDP2-202ENST00000378198 HIVEP1P15822 2718 aa11.97□□□□□ -0.49
TDP2-202ENST00000378198 HAMPP81172 84 aa11.97□□□□□ -0.49
TDP2-202ENST00000378198 SYCNQ0VAF6 134 aa11.97□□□□□ -0.49
TDP2-202ENST00000378198 CYSTM1Q9H1C7 97 aa11.97□□□□□ -0.49
TDP2-202ENST00000378198 BCE1O60756 84 aa11.96□□□□□ -0.49
TDP2-202ENST00000378198 CXCL6P80162 114 aa11.96□□□□□ -0.49
TDP2-202ENST00000378198 ATRQ13535 2644 aa11.96□□□□□ -0.5
TDP2-202ENST00000378198 TMEM258P61165 79 aa11.95□□□□□ -0.5
TDP2-202ENST00000378198 HECTD1Q9ULT8 2610 aa11.95□□□□□ -0.5
TDP2-202ENST00000378198 DNAH10OSP0CZ25 163 aa11.93□□□□□ -0.5
TDP2-202ENST00000378198 J3KT08 172 aa11.91□□□□□ -0.5
TDP2-202ENST00000378198 NKAPP1Q8N9T2 125 aa11.91□□□□□ -0.5
TDP2-202ENST00000378198 KCNQ1DNQ9H478 68 aa11.91□□□□□ -0.5
TDP2-202ENST00000378198 TRRAPQ9Y4A5 3859 aa11.91□□□□□ -0.5
TDP2-202ENST00000378198 RPS28P62857 69 aaKnown RBP11.9□□□□□ -0.5
TDP2-202ENST00000378198 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
TDP2-202ENST00000378198 TLX1NBP0CAT3 122 aa11.88□□□□□ -0.51
TDP2-202ENST00000378198 TRAV7A0A075B6U4 112 aa11.87□□□□□ -0.51
TDP2-202ENST00000378198 PLA2G2DQ9UNK4 145 aa11.87□□□□□ -0.51
TDP2-202ENST00000378198 C7orf33Q8WU49 177 aa11.87□□□□□ -0.51
TDP2-202ENST00000378198 SERTAD4-AS1Q5TG53 156 aa11.86□□□□□ -0.51
TDP2-202ENST00000378198 TRAV10A0A0B4J240 114 aa11.84□□□□□ -0.51
TDP2-202ENST00000378198 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
TDP2-202ENST00000378198 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
TDP2-202ENST00000378198 MRAPQ8TCY5 172 aa11.83□□□□□ -0.52
TDP2-202ENST00000378198 C20orf197Q8N268 126 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms