RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PDE6GP18545 87 aa10.03□□□□□ -0.8
TCOF1-202ENST00000377797 Q8N3U1 123 aa10.03□□□□□ -0.8
TCOF1-202ENST00000377797 LY6G6CO95867 125 aa10.02□□□□□ -0.8
TCOF1-202ENST00000377797 ZNF73O43830 326 aaPredicted RBP10.02□□□□□ -0.81
TCOF1-202ENST00000377797 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
TCOF1-202ENST00000377797 RPL37AP8A6NKH3 93 aa10.02□□□□□ -0.81
TCOF1-202ENST00000377797 MP68P56378 58 aa10.02□□□□□ -0.81
TCOF1-202ENST00000377797 C20orf197Q8N268 126 aa10.02□□□□□ -0.81
TCOF1-202ENST00000377797 PLAC8L1A1L4L8 177 aa10.01□□□□□ -0.81
TCOF1-202ENST00000377797 UPK3BQ9BT76 320 aa10.01□□□□□ -0.81
TCOF1-202ENST00000377797 NOTCH1P46531 2555 aa10□□□□□ -0.81
TCOF1-202ENST00000377797 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
TCOF1-202ENST00000377797 H3BNG1 76 aa10□□□□□ -0.81
TCOF1-202ENST00000377797 C3orf22Q8N5N4 141 aa10□□□□□ -0.81
TCOF1-202ENST00000377797 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
TCOF1-202ENST00000377797 LINC01556Q5JQF7 62 aa9.99□□□□□ -0.81
TCOF1-202ENST00000377797 B9D2Q9BPU9 175 aa9.99□□□□□ -0.81
TCOF1-202ENST00000377797 UTP20O75691 2785 aaKnown RBP9.98□□□□□ -0.81
TCOF1-202ENST00000377797 Q6ZRU5 148 aa9.98□□□□□ -0.81
TCOF1-202ENST00000377797 LINC00337Q8N6G1 96 aa9.98□□□□□ -0.81
TCOF1-202ENST00000377797 KRTAP10-11P60412 298 aa9.98□□□□□ -0.81
TCOF1-202ENST00000377797 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
TCOF1-202ENST00000377797 BAHCC1Q9P281 2608 aa9.97□□□□□ -0.81
TCOF1-202ENST00000377797 A0A096LNI7 61 aa9.97□□□□□ -0.81
TCOF1-202ENST00000377797 BRK1Q8WUW1 75 aa9.97□□□□□ -0.81
TCOF1-202ENST00000377797 NHLRC4P0CG21 123 aaPredicted RBP9.97□□□□□ -0.81
TCOF1-202ENST00000377797 SPATA3Q8NHX4 192 aa9.95□□□□□ -0.82
TCOF1-202ENST00000377797 ENHOQ6UWT2 76 aa9.94□□□□□ -0.82
TCOF1-202ENST00000377797 FAM236DA0A1B0GTK5 79 aa9.94□□□□□ -0.82
TCOF1-202ENST00000377797 NDUFB1O75438 58 aa9.94□□□□□ -0.82
TCOF1-202ENST00000377797 FAM236CP0DP71 79 aa9.94□□□□□ -0.82
TCOF1-202ENST00000377797 SOSTDC1Q6X4U4 206 aa9.93□□□□□ -0.82
TCOF1-202ENST00000377797 A0A087WYN8 130 aa9.93□□□□□ -0.82
TCOF1-202ENST00000377797 ATP5EP2Q5VTU8 51 aa9.93□□□□□ -0.82
TCOF1-202ENST00000377797 BPY2O14599 106 aa9.92□□□□□ -0.82
TCOF1-202ENST00000377797 IMUPQ9GZP8 106 aa9.92□□□□□ -0.82
TCOF1-202ENST00000377797 DHRS4-AS1Q9P1J3 65 aa9.92□□□□□ -0.82
TCOF1-202ENST00000377797 ZANQ9Y493 2812 aa9.92□□□□□ -0.82
TCOF1-202ENST00000377797 Q8N814 137 aa9.92□□□□□ -0.82
TCOF1-202ENST00000377797 C10orf25Q5T742 122 aa9.91□□□□□ -0.82
TCOF1-202ENST00000377797 CCKP06307 115 aa9.91□□□□□ -0.82
TCOF1-202ENST00000377797 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.91□□□□□ -0.82
TCOF1-202ENST00000377797 LINC00612Q8N6U2 182 aa9.91□□□□□ -0.82
TCOF1-202ENST00000377797 F8WDY8 70 aa9.91□□□□□ -0.82
TCOF1-202ENST00000377797 V9GYY9 64 aa9.91□□□□□ -0.82
TCOF1-202ENST00000377797 A0A0U1RQV1 116 aa9.9□□□□□ -0.82
TCOF1-202ENST00000377797 SCXQ7RTU7 201 aa9.9□□□□□ -0.82
TCOF1-202ENST00000377797 K7EIL1 84 aa9.9□□□□□ -0.83
TCOF1-202ENST00000377797 PPDPFQ9H3Y8 114 aa9.89□□□□□ -0.83
TCOF1-202ENST00000377797 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
TCOF1-202ENST00000377797 C6orf48Q9UBA6 75 aa9.89□□□□□ -0.83
TCOF1-202ENST00000377797 LINC00474Q9P2X8 69 aa9.88□□□□□ -0.83
TCOF1-202ENST00000377797 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
TCOF1-202ENST00000377797 APCP25054 2843 aa9.88□□□□□ -0.83
TCOF1-202ENST00000377797 LINC00588Q9Y4M8 146 aa9.88□□□□□ -0.83
TCOF1-202ENST00000377797 NBEAL2Q6ZNJ1 2754 aa9.87□□□□□ -0.83
TCOF1-202ENST00000377797 CHKB-CPT1BH3BT56 60 aa9.87□□□□□ -0.83
TCOF1-202ENST00000377797 LITAFQ99732 161 aa9.86□□□□□ -0.83
TCOF1-202ENST00000377797 COX7CP15954 63 aa9.86□□□□□ -0.83
TCOF1-202ENST00000377797 HRCT1Q6UXD1 115 aa9.86□□□□□ -0.83
TCOF1-202ENST00000377797 MDFIQ99750 246 aa9.86□□□□□ -0.83
TCOF1-202ENST00000377797 C3orf84H3BNL1 204 aa9.85□□□□□ -0.83
TCOF1-202ENST00000377797 LRCOL1A6NCL2 159 aa9.85□□□□□ -0.83
TCOF1-202ENST00000377797 Q6Q795 121 aa9.84□□□□□ -0.83
TCOF1-202ENST00000377797 C7orf33Q8WU49 177 aa9.83□□□□□ -0.84
TCOF1-202ENST00000377797 HRNRQ86YZ3 2850 aaPredicted RBP9.83□□□□□ -0.84
TCOF1-202ENST00000377797 MRPL55Q7Z7F7 128 aaKnown RBP9.83□□□□□ -0.84
TCOF1-202ENST00000377797 FAM19A3Q7Z5A8 133 aa9.82□□□□□ -0.84
TCOF1-202ENST00000377797 H0Y9J4 135 aa9.82□□□□□ -0.84
TCOF1-202ENST00000377797 LINC00575Q6W349 94 aa9.82□□□□□ -0.84
TCOF1-202ENST00000377797 REG3GQ6UW15 175 aa9.81□□□□□ -0.84
TCOF1-202ENST00000377797 C4orf48Q5BLP8 95 aa9.81□□□□□ -0.84
TCOF1-202ENST00000377797 FAM240AA0A1B0GVK7 77 aa9.8□□□□□ -0.84
TCOF1-202ENST00000377797 SNURFQ9Y675 71 aa9.8□□□□□ -0.84
TCOF1-202ENST00000377797 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-202ENST00000377797 DNAH10OSP0CZ25 163 aa9.8□□□□□ -0.84
TCOF1-202ENST00000377797 C1orf134Q5TEV5 83 aa9.8□□□□□ -0.84
TCOF1-202ENST00000377797 SMCPP49901 116 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-202ENST00000377797 SPTSSBQ8NFR3 76 aa9.79□□□□□ -0.84
TCOF1-202ENST00000377797 C22orf24Q9Y442 160 aa9.79□□□□□ -0.84
TCOF1-202ENST00000377797 HIVEP1P15822 2718 aa9.78□□□□□ -0.84
TCOF1-202ENST00000377797 CDIP1Q9H305 208 aa9.78□□□□□ -0.84
TCOF1-202ENST00000377797 CRYBG3Q68DQ2 2970 aa9.78□□□□□ -0.84
TCOF1-202ENST00000377797 IGLV5-52A0A0A0MRZ9 124 aa9.78□□□□□ -0.84
TCOF1-202ENST00000377797 PRR34Q9NV39 138 aa9.78□□□□□ -0.84
TCOF1-202ENST00000377797 FAM218AQ96MZ4 157 aa9.77□□□□□ -0.85
TCOF1-202ENST00000377797 PRO0461Q9UI25 63 aa9.77□□□□□ -0.85
TCOF1-202ENST00000377797 Q6JHZ5 121 aa9.77□□□□□ -0.85
TCOF1-202ENST00000377797 PRYO14603 147 aa9.76□□□□□ -0.85
TCOF1-202ENST00000377797 NDUFC1O43677 76 aa9.76□□□□□ -0.85
TCOF1-202ENST00000377797 DMDP11532 3685 aa9.76□□□□□ -0.85
TCOF1-202ENST00000377797 NBEAL1Q6ZS30 2694 aa9.75□□□□□ -0.85
TCOF1-202ENST00000377797 C1orf195Q5TG92 126 aa9.75□□□□□ -0.85
TCOF1-202ENST00000377797 TM2D3Q9BRN9 247 aa9.75□□□□□ -0.85
TCOF1-202ENST00000377797 ATP5EP56381 51 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-202ENST00000377797 GVQW2A0A096LPI5 108 aaPredicted RBP9.74□□□□□ -0.85
TCOF1-202ENST00000377797 KIAA0087Q14695 138 aa9.74□□□□□ -0.85
TCOF1-202ENST00000377797 WDFY3Q8IZQ1 3526 aa9.74□□□□□ -0.85
TCOF1-202ENST00000377797 C1orf137Q5JT78 98 aa9.73□□□□□ -0.85
TCOF1-202ENST00000377797 IGKV4-1P06312 121 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms