RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 NOTCH2Q04721 2471 aa7.91□□□□□ -1.14
TNFRSF9-201ENST00000377507 Q6JHZ5 121 aa7.9□□□□□ -1.14
TNFRSF9-201ENST00000377507 LINC00575Q6W349 94 aa7.9□□□□□ -1.14
TNFRSF9-201ENST00000377507 S100A7L2Q5SY68 101 aa7.9□□□□□ -1.15
TNFRSF9-201ENST00000377507 TENM1Q9UKZ4 2725 aa7.89□□□□□ -1.15
TNFRSF9-201ENST00000377507 LINC00526Q96FQ7 95 aa7.89□□□□□ -1.15
TNFRSF9-201ENST00000377507 C6orf48Q9UBA6 75 aa7.88□□□□□ -1.15
TNFRSF9-201ENST00000377507 SS18L2Q9UHA2 77 aa7.88□□□□□ -1.15
TNFRSF9-201ENST00000377507 HECTD1Q9ULT8 2610 aa7.88□□□□□ -1.15
TNFRSF9-201ENST00000377507 FLNBO75369 2602 aaKnown RBP7.87□□□□□ -1.15
TNFRSF9-201ENST00000377507 KRTAP26-1Q6PEX3 210 aa7.87□□□□□ -1.15
TNFRSF9-201ENST00000377507 TRRAPQ9Y4A5 3859 aa7.86□□□□□ -1.15
TNFRSF9-201ENST00000377507 hADV29S1A0JD25 119 aa7.86□□□□□ -1.15
TNFRSF9-201ENST00000377507 KPRPQ5T749 579 aaPredicted RBP7.86□□□□□ -1.15
TNFRSF9-201ENST00000377507 KRTAP10-11P60412 298 aa7.85□□□□□ -1.15
TNFRSF9-201ENST00000377507 RPL18AQ02543 176 aaKnown RBP7.85□□□□□ -1.15
TNFRSF9-201ENST00000377507 WFDC10BQ8IUB3 73 aa7.85□□□□□ -1.15
TNFRSF9-201ENST00000377507 UQCRQO14949 82 aa7.84□□□□□ -1.15
TNFRSF9-201ENST00000377507 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
TNFRSF9-201ENST00000377507 EGFEM1PQ0D2K5 195 aa7.84□□□□□ -1.16
TNFRSF9-201ENST00000377507 OXLD1Q5BKU9 147 aa7.84□□□□□ -1.16
TNFRSF9-201ENST00000377507 TEP1Q99973 2627 aaKnown RBP7.83□□□□□ -1.16
TNFRSF9-201ENST00000377507 IGKV3D-7A0A0C4DH55 119 aa7.83□□□□□ -1.16
TNFRSF9-201ENST00000377507 ZNF561-AS1K7EIQ3 104 aa7.83□□□□□ -1.16
TNFRSF9-201ENST00000377507 C2orf48Q96LS8 159 aa7.83□□□□□ -1.16
TNFRSF9-201ENST00000377507 LOC110117498A0A087WWA1 95 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 TRBV10-3A0A0K0K1G6 114 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 H3BQ85 93 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 ATOX1O00244 68 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 KRTAP3-2Q9BYR7 98 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 RETNQ9HD89 108 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 HIVEP1P15822 2718 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 ATP5EP2Q5VTU8 51 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 Q6ZTC4 211 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 XAGE1AQ9HD64 81 aa7.82□□□□□ -1.16
TNFRSF9-201ENST00000377507 ATRQ13535 2644 aa7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 TRAV23DV6A0A075B6W5 121 aa7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 TRBV7-6A0A0J9YX20 115 aa7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 COX7CP15954 63 aa7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 RBM3P98179 157 aaKnown RBP7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 Q6ZQT0 140 aa7.81□□□□□ -1.16
TNFRSF9-201ENST00000377507 VPREB1P12018 145 aa7.8□□□□□ -1.16
TNFRSF9-201ENST00000377507 ESRGQ1W209 222 aa7.8□□□□□ -1.16
TNFRSF9-201ENST00000377507 C15orf56Q8N910 161 aa7.8□□□□□ -1.16
TNFRSF9-201ENST00000377507 DIRC1Q969H9 104 aa7.8□□□□□ -1.16
TNFRSF9-201ENST00000377507 CAMK2N2Q96S95 79 aa7.8□□□□□ -1.16
TNFRSF9-201ENST00000377507 ZNF73O43830 326 aaPredicted RBP7.79□□□□□ -1.16
TNFRSF9-201ENST00000377507 F8WDY8 70 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 HIGD2BQ4VC39 106 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 LINC01556Q5JQF7 62 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 Q6ZQY7 126 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 ELOF1P60002 83 aaKnown RBP7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 C9orf153Q5TBE3 101 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 Q6ZRU5 148 aa7.78□□□□□ -1.16
TNFRSF9-201ENST00000377507 A0A087WVE0 104 aa7.77□□□□□ -1.17
TNFRSF9-201ENST00000377507 M0R378 163 aa7.77□□□□□ -1.17
TNFRSF9-201ENST00000377507 CRYGAP11844 174 aa7.77□□□□□ -1.17
TNFRSF9-201ENST00000377507 PDE6GP18545 87 aa7.77□□□□□ -1.17
TNFRSF9-201ENST00000377507 COX7BP24311 80 aa7.76□□□□□ -1.17
TNFRSF9-201ENST00000377507 UBL5Q9BZL1 73 aa7.76□□□□□ -1.17
TNFRSF9-201ENST00000377507 LAMTOR3Q9UHA4 124 aa7.76□□□□□ -1.17
TNFRSF9-201ENST00000377507 USP17L23D6RBM5 183 aa7.76□□□□□ -1.17
TNFRSF9-201ENST00000377507 GHRHP01286 108 aa7.76□□□□□ -1.17
TNFRSF9-201ENST00000377507 C1orf43Q9BWL3 253 aa7.75□□□□□ -1.17
TNFRSF9-201ENST00000377507 SERP2Q8N6R1 65 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 DSCR8Q96T75 97 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 DEFB131BA0A096LNP1 70 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 KRTAP24-1Q3LI83 254 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 C3orf56Q8N813 242 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 C11orf45Q8TAV5 145 aa7.74□□□□□ -1.17
TNFRSF9-201ENST00000377507 TRBV7-4A0A0J9YYF1 115 aa7.73□□□□□ -1.17
TNFRSF9-201ENST00000377507 M0R2N4 97 aa7.73□□□□□ -1.17
TNFRSF9-201ENST00000377507 DNAH10OSP0CZ25 163 aa7.73□□□□□ -1.17
TNFRSF9-201ENST00000377507 Q6ZRP5 223 aa7.73□□□□□ -1.17
TNFRSF9-201ENST00000377507 LINC00528Q8N1L1 170 aa7.73□□□□□ -1.17
TNFRSF9-201ENST00000377507 UPK3BQ9BT76 320 aa7.72□□□□□ -1.17
TNFRSF9-201ENST00000377507 SYCNQ0VAF6 134 aa7.71□□□□□ -1.18
TNFRSF9-201ENST00000377507 FAM19A1Q7Z5A9 133 aa7.71□□□□□ -1.18
TNFRSF9-201ENST00000377507 IGKV2D-24A0A075B6R9 120 aa7.7□□□□□ -1.18
TNFRSF9-201ENST00000377507 ANK2Q01484 3957 aa7.7□□□□□ -1.18
TNFRSF9-201ENST00000377507 Q6ZVQ6 151 aa7.7□□□□□ -1.18
TNFRSF9-201ENST00000377507 TLX1NBP0CAT3 122 aa7.69□□□□□ -1.18
TNFRSF9-201ENST00000377507 LINC01547P58512 204 aaPredicted RBP7.69□□□□□ -1.18
TNFRSF9-201ENST00000377507 KCNQ1DNQ9H478 68 aa7.69□□□□□ -1.18
TNFRSF9-201ENST00000377507 SMIM20Q8N5G0 67 aa7.68□□□□□ -1.18
TNFRSF9-201ENST00000377507 BCE1O60756 84 aa7.68□□□□□ -1.18
TNFRSF9-201ENST00000377507 CXCL6P80162 114 aa7.68□□□□□ -1.18
TNFRSF9-201ENST00000377507 PLA2G2DQ9UNK4 145 aa7.68□□□□□ -1.18
TNFRSF9-201ENST00000377507 CMYA5Q8N3K9 4069 aa7.67□□□□□ -1.18
TNFRSF9-201ENST00000377507 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
TNFRSF9-201ENST00000377507 DNAH3Q8TD57 4116 aa7.67□□□□□ -1.18
TNFRSF9-201ENST00000377507 MAST4O15021 2626 aa7.67□□□□□ -1.18
TNFRSF9-201ENST00000377507 TRAV10A0A0B4J240 114 aa7.65□□□□□ -1.18
TNFRSF9-201ENST00000377507 SERTAD4-AS1Q5TG53 156 aa7.65□□□□□ -1.18
TNFRSF9-201ENST00000377507 C7orf33Q8WU49 177 aa7.64□□□□□ -1.19
TNFRSF9-201ENST00000377507 LINC00588Q9Y4M8 146 aa7.64□□□□□ -1.19
TNFRSF9-201ENST00000377507 TENM3Q9P273 2699 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms