RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 TRACP01848 142 aa5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 SLPIP03973 132 aa5.83□□□□□ -1.48
CRNKL1-202ENST00000377340 INAFM2P0DMQ5 153 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 FUSP35637 526 aaKnown RBP eCLIP5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 ANKRD29Q8N6D5 301 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 HIGD1BQ9P298 99 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 A0A096LNJ9 63 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 PLAC8L1A1L4L8 177 aa5.82□□□□□ -1.48
CRNKL1-202ENST00000377340 FAM236DA0A1B0GTK5 79 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 NDUFC2O95298 119 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 FAM236CP0DP71 79 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 C16orf90A8MZG2 172 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 AMELXQ99217 191 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 SPANXB1Q9NS25 103 aaPredicted RBP5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 H3BNG1 76 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 SPANXDQ9BXN6 97 aa5.81□□□□□ -1.48
CRNKL1-202ENST00000377340 F8W1H4 67 aa5.8□□□□□ -1.48
CRNKL1-202ENST00000377340 UBL5Q9BZL1 73 aa5.8□□□□□ -1.48
CRNKL1-202ENST00000377340 TRAV23DV6A0A075B6W5 121 aa5.8□□□□□ -1.48
CRNKL1-202ENST00000377340 M0R378 163 aa5.8□□□□□ -1.48
CRNKL1-202ENST00000377340 NDUFS5O43920 106 aa5.8□□□□□ -1.48
CRNKL1-202ENST00000377340 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 C1orf137Q5JT78 98 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 IGLV9-49A0A0B4J1Y8 123 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 NDUFC2-KCTD14E9PQ53 114 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 F8WDY8 70 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 C3orf84H3BNL1 204 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 PKD1L1Q8TDX9 2849 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 IGHV3OR16-9A0A0B4J2B5 98 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 DNAH10OSP0CZ25 163 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 TSPEAR-AS2P59090 65 aa5.79□□□□□ -1.48
CRNKL1-202ENST00000377340 ZFHX3Q15911 3703 aa5.78□□□□□ -1.48
CRNKL1-202ENST00000377340 TRBV30A0A0K0K1B3 111 aa5.78□□□□□ -1.48
CRNKL1-202ENST00000377340 PPDPFLQ8WWR9 84 aa5.78□□□□□ -1.48
CRNKL1-202ENST00000377340 SPINK6Q6UWN8 80 aa5.78□□□□□ -1.48
CRNKL1-202ENST00000377340 Q6ZQY7 126 aa5.78□□□□□ -1.48
CRNKL1-202ENST00000377340 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
CRNKL1-202ENST00000377340 A8MTW9 85 aa5.77□□□□□ -1.49
CRNKL1-202ENST00000377340 FAM236AA0A1B0GUQ0 79 aa5.77□□□□□ -1.49
CRNKL1-202ENST00000377340 FAM236BA0A1B0GV22 79 aa5.77□□□□□ -1.49
CRNKL1-202ENST00000377340 ENHOQ6UWT2 76 aa5.77□□□□□ -1.49
CRNKL1-202ENST00000377340 ZNF73O43830 326 aaPredicted RBP5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 RBM3P98179 157 aaKnown RBP5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 COX17Q14061 63 aa5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 ADAMTSL4-AS1Q5T5F5 129 aa5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 C10orf25Q5T742 122 aa5.76□□□□□ -1.49
CRNKL1-202ENST00000377340 ZFHX4Q86UP3 3567 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 NREPQ16612 68 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 C2orf48Q96LS8 159 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 OTOGQ6ZRI0 2925 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 RTL8CO15255 209 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 SMIM11BQ8TCY0 68 aa5.75□□□□□ -1.49
CRNKL1-202ENST00000377340 H0Y9J4 135 aa5.74□□□□□ -1.49
CRNKL1-202ENST00000377340 RPL28P46779 137 aaKnown RBP5.74□□□□□ -1.49
CRNKL1-202ENST00000377340 PRLHP81277 87 aa5.74□□□□□ -1.49
CRNKL1-202ENST00000377340 TMEM256-PLSCR3K7ERE1 68 aa5.74□□□□□ -1.49
CRNKL1-202ENST00000377340 TRIAP1O43715 76 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 NDUFB1O75438 58 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 A0A0B4J2C4 111 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 TIMM17BO60830 172 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 TCL1BO95988 128 aa5.73□□□□□ -1.49
CRNKL1-202ENST00000377340 C6orf48Q9UBA6 75 aa5.72□□□□□ -1.49
CRNKL1-202ENST00000377340 C22orf24Q9Y442 160 aa5.72□□□□□ -1.49
CRNKL1-202ENST00000377340 XGP55808 180 aa5.72□□□□□ -1.49
CRNKL1-202ENST00000377340 REG3GQ6UW15 175 aa5.72□□□□□ -1.49
CRNKL1-202ENST00000377340 CIRBP-AS1Q8TBR5 109 aa5.72□□□□□ -1.49
CRNKL1-202ENST00000377340 SMR3BP02814 79 aaPredicted RBP5.71□□□□□ -1.5
CRNKL1-202ENST00000377340 C2orf91Q6ZV80 131 aa5.71□□□□□ -1.5
CRNKL1-202ENST00000377340 APLNQ9ULZ1 77 aa5.71□□□□□ -1.5
CRNKL1-202ENST00000377340 JMJD7-PLA2G4BH0Y9G9 81 aa5.7□□□□□ -1.5
CRNKL1-202ENST00000377340 WIPF1O43516 503 aa5.7□□□□□ -1.5
CRNKL1-202ENST00000377340 C4orf26Q17RF5 130 aa5.7□□□□□ -1.5
CRNKL1-202ENST00000377340 DHRS4-AS1Q9P1J3 65 aa5.7□□□□□ -1.5
CRNKL1-202ENST00000377340 CELSR1Q9NYQ6 3014 aa5.7□□□□□ -1.5
CRNKL1-202ENST00000377340 IGKV3D-7A0A0C4DH55 119 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 CCKP06307 115 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 PHF5AQ7RTV0 110 aaKnown RBP5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 TENM3Q9P273 2699 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 FAM229AH3BQW9 127 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 CASC10Q5T4H9 136 aa5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 ZNF706Q9Y5V0 76 aaPredicted RBP5.69□□□□□ -1.5
CRNKL1-202ENST00000377340 TRBV10-2A0A0K0K1G8 114 aa5.68□□□□□ -1.5
CRNKL1-202ENST00000377340 LINC00612Q8N6U2 182 aa5.68□□□□□ -1.5
CRNKL1-202ENST00000377340 MPLKIPQ8TAP9 179 aa5.68□□□□□ -1.5
CRNKL1-202ENST00000377340 LINC00167Q96N53 147 aa5.67□□□□□ -1.5
CRNKL1-202ENST00000377340 VPREB1P12018 145 aa5.67□□□□□ -1.5
CRNKL1-202ENST00000377340 SCXQ7RTU7 201 aa5.67□□□□□ -1.5
CRNKL1-202ENST00000377340 TENM1Q9UKZ4 2725 aa5.67□□□□□ -1.5
CRNKL1-202ENST00000377340 IGLV5-39A0A0G2JS06 123 aa5.67□□□□□ -1.5
CRNKL1-202ENST00000377340 LINC00476Q8WZB0 136 aa5.66□□□□□ -1.5
CRNKL1-202ENST00000377340 A0A087WYN8 130 aa5.66□□□□□ -1.5
CRNKL1-202ENST00000377340 TMEM258P61165 79 aa5.66□□□□□ -1.5
CRNKL1-202ENST00000377340 TEN1Q86WV5 123 aa5.66□□□□□ -1.5
CRNKL1-202ENST00000377340 SPTSSBQ8NFR3 76 aa5.66□□□□□ -1.5
CRNKL1-202ENST00000377340 NBPF19A0A087WUL8 3843 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms