RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 A0A096LNJ9 63 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 M0R378 163 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 ATP6V1G1O75348 118 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 SCO1O75880 301 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 SNAPINO95295 136 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 CDIP1Q9H305 208 aa8.59□□□□□ -1.03
HDAC6-204ENST00000376643 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
HDAC6-204ENST00000376643 LINC00587B1AMM8 73 aa8.58□□□□□ -1.04
HDAC6-204ENST00000376643 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
HDAC6-204ENST00000376643 LINC00158P58513 81 aa8.58□□□□□ -1.04
HDAC6-204ENST00000376643 ZNF625Q96I27 306 aaPredicted RBP8.58□□□□□ -1.04
HDAC6-204ENST00000376643 S100A12P80511 92 aa8.57□□□□□ -1.04
HDAC6-204ENST00000376643 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
HDAC6-204ENST00000376643 PLEKHB2Q96CS7 222 aa8.57□□□□□ -1.04
HDAC6-204ENST00000376643 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
HDAC6-204ENST00000376643 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
HDAC6-204ENST00000376643 IGLV7-46A0A075B6I9 117 aa8.56□□□□□ -1.04
HDAC6-204ENST00000376643 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
HDAC6-204ENST00000376643 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
HDAC6-204ENST00000376643 PRYO14603 147 aa8.54□□□□□ -1.04
HDAC6-204ENST00000376643 HERV-K104P63124 156 aa8.54□□□□□ -1.04
HDAC6-204ENST00000376643 PMCHL1Q16048 86 aa8.54□□□□□ -1.04
HDAC6-204ENST00000376643 CHCHD1Q96BP2 118 aaKnown RBP8.54□□□□□ -1.04
HDAC6-204ENST00000376643 URB1-AS1Q96HZ7 61 aa8.54□□□□□ -1.04
HDAC6-204ENST00000376643 RETNLBQ9BQ08 111 aa8.54□□□□□ -1.04
HDAC6-204ENST00000376643 FP248Q71RG6 208 aaPredicted RBP8.53□□□□□ -1.04
HDAC6-204ENST00000376643 MAP1LC3CQ9BXW4 147 aa8.53□□□□□ -1.04
HDAC6-204ENST00000376643 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
HDAC6-204ENST00000376643 MEIG1Q5JSS6 88 aa8.52□□□□□ -1.05
HDAC6-204ENST00000376643 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.05
HDAC6-204ENST00000376643 SPRR4Q96PI1 79 aa8.52□□□□□ -1.05
HDAC6-204ENST00000376643 LINC00337Q8N6G1 96 aa8.51□□□□□ -1.05
HDAC6-204ENST00000376643 MUC2Q02817 5179 aa8.51□□□□□ -1.05
HDAC6-204ENST00000376643 BOD1L2Q8IYS8 172 aa8.5□□□□□ -1.05
HDAC6-204ENST00000376643 ETDCA0A1B0GVM5 59 aa8.49□□□□□ -1.05
HDAC6-204ENST00000376643 COLCA2A8K830 154 aa8.49□□□□□ -1.05
HDAC6-204ENST00000376643 C3orf22Q8N5N4 141 aa8.49□□□□□ -1.05
HDAC6-204ENST00000376643 PPDPFQ9H3Y8 114 aa8.49□□□□□ -1.05
HDAC6-204ENST00000376643 KCNQ1DNQ9H478 68 aa8.49□□□□□ -1.05
HDAC6-204ENST00000376643 A0A0U1RRA0 63 aa8.48□□□□□ -1.05
HDAC6-204ENST00000376643 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
HDAC6-204ENST00000376643 SMIM13P0DJ93 91 aa8.48□□□□□ -1.05
HDAC6-204ENST00000376643 Q8NDZ9 215 aa8.48□□□□□ -1.05
HDAC6-204ENST00000376643 HSBP1O75506 76 aa8.47□□□□□ -1.05
HDAC6-204ENST00000376643 SPRR1AP35321 89 aa8.47□□□□□ -1.05
HDAC6-204ENST00000376643 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
HDAC6-204ENST00000376643 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
HDAC6-204ENST00000376643 SPINK1P00995 79 aa8.46□□□□□ -1.06
HDAC6-204ENST00000376643 NCR3O14931 201 aa8.45□□□□□ -1.06
HDAC6-204ENST00000376643 FAM19A2Q8N3H0 131 aa8.45□□□□□ -1.06
HDAC6-204ENST00000376643 Q8NBF4 154 aa8.44□□□□□ -1.06
HDAC6-204ENST00000376643 TRBV10-2A0A0K0K1G8 114 aa8.43□□□□□ -1.06
HDAC6-204ENST00000376643 TRGC2P03986 189 aa8.43□□□□□ -1.06
HDAC6-204ENST00000376643 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
HDAC6-204ENST00000376643 MIEN1Q9BRT3 115 aa8.43□□□□□ -1.06
HDAC6-204ENST00000376643 PLNP26678 52 aa8.42□□□□□ -1.06
HDAC6-204ENST00000376643 HERVK_113P61574 105 aa8.42□□□□□ -1.06
HDAC6-204ENST00000376643 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
HDAC6-204ENST00000376643 LINC00483Q53H64 154 aa8.42□□□□□ -1.06
HDAC6-204ENST00000376643 TRBV10-3A0A0K0K1G6 114 aa8.41□□□□□ -1.06
HDAC6-204ENST00000376643 NMUP48645 174 aa8.41□□□□□ -1.06
HDAC6-204ENST00000376643 CBY1Q9Y3M2 126 aa8.41□□□□□ -1.06
HDAC6-204ENST00000376643 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
HDAC6-204ENST00000376643 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-204ENST00000376643 DDTP30046 118 aa8.4□□□□□ -1.06
HDAC6-204ENST00000376643 LINC00310P59036 64 aa8.4□□□□□ -1.06
HDAC6-204ENST00000376643 JOSD1Q15040 202 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-204ENST00000376643 LCE2AQ5TA79 106 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-204ENST00000376643 SSBP3-AS1Q7Z2R9 100 aa8.4□□□□□ -1.06
HDAC6-204ENST00000376643 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
HDAC6-204ENST00000376643 SPANXB1Q9NS25 103 aaPredicted RBP8.4□□□□□ -1.06
HDAC6-204ENST00000376643 LEPROTO15243 131 aa8.39□□□□□ -1.07
HDAC6-204ENST00000376643 LEPROTL1O95214 131 aa8.39□□□□□ -1.07
HDAC6-204ENST00000376643 HSPB8Q9UJY1 196 aa8.39□□□□□ -1.07
HDAC6-204ENST00000376643 H0Y8G0 127 aa8.38□□□□□ -1.07
HDAC6-204ENST00000376643 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
HDAC6-204ENST00000376643 DAND5Q8N907 189 aa8.38□□□□□ -1.07
HDAC6-204ENST00000376643 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
HDAC6-204ENST00000376643 B5MCH6 92 aa8.37□□□□□ -1.07
HDAC6-204ENST00000376643 NDUFC2O95298 119 aa8.37□□□□□ -1.07
HDAC6-204ENST00000376643 S100A7L2Q5SY68 101 aa8.37□□□□□ -1.07
HDAC6-204ENST00000376643 J3QQQ9 107 aa8.36□□□□□ -1.07
HDAC6-204ENST00000376643 LGALS3P17931 250 aaKnown RBP8.36□□□□□ -1.07
HDAC6-204ENST00000376643 SEC61BP60468 96 aaKnown RBP8.36□□□□□ -1.07
HDAC6-204ENST00000376643 KRTAP13-3Q3SY46 172 aa8.36□□□□□ -1.07
HDAC6-204ENST00000376643 Q6ZRX8 168 aa8.36□□□□□ -1.07
HDAC6-204ENST00000376643 IGLV9-49A0A0B4J1Y8 123 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 SLC25A20O43772 301 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 DPM2O94777 84 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 S100A1P23297 94 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 MOBPQ13875 183 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 ASB16-AS1Q495Z4 193 aa8.35□□□□□ -1.07
HDAC6-204ENST00000376643 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
HDAC6-204ENST00000376643 HINT1P49773 126 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-204ENST00000376643 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
HDAC6-204ENST00000376643 TRAV23DV6A0A075B6W5 121 aa8.32□□□□□ -1.08
HDAC6-204ENST00000376643 IGKCP01834 107 aa8.32□□□□□ -1.08
HDAC6-204ENST00000376643 IGLV6-57P01721 117 aa8.31□□□□□ -1.08
HDAC6-204ENST00000376643 TSPEAR-AS2P59090 65 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms