RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ZNF625Q96I27 306 aaPredicted RBP13.32□□□□□ -0.28
C9orf47-202ENST00000375850 A0A096LNJ9 63 aa13.31□□□□□ -0.28
C9orf47-202ENST00000375850 C3orf22Q8N5N4 141 aa13.31□□□□□ -0.28
C9orf47-202ENST00000375850 LINC00614P0C842 121 aa13.3□□□□□ -0.28
C9orf47-202ENST00000375850 C4orf48Q5BLP8 95 aa13.29□□□□□ -0.28
C9orf47-202ENST00000375850 TMEM170BQ5T4T1 132 aa13.29□□□□□ -0.28
C9orf47-202ENST00000375850 SPRR4Q96PI1 79 aa13.29□□□□□ -0.28
C9orf47-202ENST00000375850 BAGE3Q86Y29 109 aa13.28□□□□□ -0.28
C9orf47-202ENST00000375850 Q8NDZ9 215 aa13.28□□□□□ -0.28
C9orf47-202ENST00000375850 C11orf86A6NJI1 115 aa13.27□□□□□ -0.29
C9orf47-202ENST00000375850 LINC00158P58513 81 aa13.27□□□□□ -0.29
C9orf47-202ENST00000375850 RHEBQ15382 184 aa13.26□□□□□ -0.29
C9orf47-202ENST00000375850 C18orf32Q8TCD1 76 aa13.26□□□□□ -0.29
C9orf47-202ENST00000375850 MUC17Q685J3 4493 aa13.26□□□□□ -0.29
C9orf47-202ENST00000375850 URB1-AS1Q96HZ7 61 aa13.24□□□□□ -0.29
C9orf47-202ENST00000375850 PRYO14603 147 aa13.23□□□□□ -0.29
C9orf47-202ENST00000375850 LINC00337Q8N6G1 96 aa13.22□□□□□ -0.29
C9orf47-202ENST00000375850 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
C9orf47-202ENST00000375850 ATP6V1G1O75348 118 aa13.21□□□□□ -0.29
C9orf47-202ENST00000375850 RPS10P5Q9NQ39 176 aa13.21□□□□□ -0.29
C9orf47-202ENST00000375850 CHTOPQ9Y3Y2 248 aaKnown RBP13.2□□□□□ -0.3
C9orf47-202ENST00000375850 SPINK1P00995 79 aa13.19□□□□□ -0.3
C9orf47-202ENST00000375850 PMCHL1Q16048 86 aa13.19□□□□□ -0.3
C9orf47-202ENST00000375850 LINC00587B1AMM8 73 aa13.18□□□□□ -0.3
C9orf47-202ENST00000375850 SPRR1AP35321 89 aa13.18□□□□□ -0.3
C9orf47-202ENST00000375850 C10orf91Q5T1B1 145 aa13.18□□□□□ -0.3
C9orf47-202ENST00000375850 KCNQ1DNQ9H478 68 aa13.18□□□□□ -0.3
C9orf47-202ENST00000375850 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
C9orf47-202ENST00000375850 BOD1L2Q8IYS8 172 aa13.17□□□□□ -0.3
C9orf47-202ENST00000375850 Q8NBF4 154 aa13.17□□□□□ -0.3
C9orf47-202ENST00000375850 TRAV12-1A0A0B4J245 112 aa13.16□□□□□ -0.3
C9orf47-202ENST00000375850 HERV-K104P63124 156 aa13.16□□□□□ -0.3
C9orf47-202ENST00000375850 S100A12P80511 92 aa13.16□□□□□ -0.3
C9orf47-202ENST00000375850 A0A0U1RRA0 63 aa13.15□□□□□ -0.3
C9orf47-202ENST00000375850 ETDCA0A1B0GVM5 59 aa13.15□□□□□ -0.3
C9orf47-202ENST00000375850 KRTAP13-3Q3SY46 172 aa13.15□□□□□ -0.3
C9orf47-202ENST00000375850 KRTAP9-6A0A140TA67 174 aa13.14□□□□□ -0.31
C9orf47-202ENST00000375850 ASB16-AS1Q495Z4 193 aa13.14□□□□□ -0.31
C9orf47-202ENST00000375850 MEIG1Q5JSS6 88 aa13.14□□□□□ -0.31
C9orf47-202ENST00000375850 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
C9orf47-202ENST00000375850 SMIM13P0DJ93 91 aa13.13□□□□□ -0.31
C9orf47-202ENST00000375850 LINC00483Q53H64 154 aa13.13□□□□□ -0.31
C9orf47-202ENST00000375850 SMCR5Q8TEV8 140 aa13.13□□□□□ -0.31
C9orf47-202ENST00000375850 NDUFA12Q9UI09 145 aa13.13□□□□□ -0.31
C9orf47-202ENST00000375850 KRTAP4-16G5E9R7 235 aaPredicted RBP13.12□□□□□ -0.31
C9orf47-202ENST00000375850 RPS29P62273 56 aaKnown RBP13.12□□□□□ -0.31
C9orf47-202ENST00000375850 DAND5Q8N907 189 aa13.12□□□□□ -0.31
C9orf47-202ENST00000375850 IFITM2Q01629 132 aa13.11□□□□□ -0.31
C9orf47-202ENST00000375850 FAM19A2Q8N3H0 131 aa13.11□□□□□ -0.31
C9orf47-202ENST00000375850 MIR7-3HGQ8N6C7 128 aa13.11□□□□□ -0.31
C9orf47-202ENST00000375850 MAP1LC3CQ9BXW4 147 aa13.11□□□□□ -0.31
C9orf47-202ENST00000375850 NCR3O14931 201 aa13.1□□□□□ -0.31
C9orf47-202ENST00000375850 IFI27L1Q96BM0 104 aa13.1□□□□□ -0.31
C9orf47-202ENST00000375850 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
C9orf47-202ENST00000375850 SEC61BP60468 96 aaKnown RBP13.09□□□□□ -0.31
C9orf47-202ENST00000375850 TRBV10-3A0A0K0K1G6 114 aa13.07□□□□□ -0.32
C9orf47-202ENST00000375850 SSBP3-AS1Q7Z2R9 100 aa13.07□□□□□ -0.32
C9orf47-202ENST00000375850 MYMXA0A1B0GTQ4 84 aa13.06□□□□□ -0.32
C9orf47-202ENST00000375850 LINC01547P58512 204 aaPredicted RBP13.06□□□□□ -0.32
C9orf47-202ENST00000375850 GAGE2AQ6NT46 116 aa13.04□□□□□ -0.32
C9orf47-202ENST00000375850 B5MCH6 92 aa13.03□□□□□ -0.32
C9orf47-202ENST00000375850 LOC107984156A0A0G2JMH3 177 aa13.02□□□□□ -0.33
C9orf47-202ENST00000375850 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.33
C9orf47-202ENST00000375850 ARL17AQ8IVW1 177 aa13.02□□□□□ -0.33
C9orf47-202ENST00000375850 SLC25A20O43772 301 aa13.01□□□□□ -0.33
C9orf47-202ENST00000375850 MOBPQ13875 183 aa13.01□□□□□ -0.33
C9orf47-202ENST00000375850 SNAPINO95295 136 aa13□□□□□ -0.33
C9orf47-202ENST00000375850 Q8N377 158 aa13□□□□□ -0.33
C9orf47-202ENST00000375850 DDTP30046 118 aa12.99□□□□□ -0.33
C9orf47-202ENST00000375850 NDUFA5Q16718 116 aa12.99□□□□□ -0.33
C9orf47-202ENST00000375850 IGLV9-49A0A0B4J1Y8 123 aa12.98□□□□□ -0.33
C9orf47-202ENST00000375850 SVBPQ8N300 66 aa12.98□□□□□ -0.33
C9orf47-202ENST00000375850 APOC3P02656 99 aa12.97□□□□□ -0.33
C9orf47-202ENST00000375850 Q6ZRX8 168 aa12.97□□□□□ -0.33
C9orf47-202ENST00000375850 HSBP1O75506 76 aa12.96□□□□□ -0.33
C9orf47-202ENST00000375850 JOSD1Q15040 202 aaPredicted RBP12.96□□□□□ -0.33
C9orf47-202ENST00000375850 SPANXB1Q9NS25 103 aaPredicted RBP12.96□□□□□ -0.33
C9orf47-202ENST00000375850 ERC2-IT1O76042 136 aa12.95□□□□□ -0.34
C9orf47-202ENST00000375850 MIEN1Q9BRT3 115 aa12.95□□□□□ -0.34
C9orf47-202ENST00000375850 LEPROTO15243 131 aa12.94□□□□□ -0.34
C9orf47-202ENST00000375850 Q9BRP9 147 aa12.93□□□□□ -0.34
C9orf47-202ENST00000375850 NDUFC2O95298 119 aa12.92□□□□□ -0.34
C9orf47-202ENST00000375850 NMUP48645 174 aa12.92□□□□□ -0.34
C9orf47-202ENST00000375850 XP32Q5T750 250 aa12.92□□□□□ -0.34
C9orf47-202ENST00000375850 PLNP26678 52 aa12.91□□□□□ -0.34
C9orf47-202ENST00000375850 S100A7L2Q5SY68 101 aa12.91□□□□□ -0.34
C9orf47-202ENST00000375850 KRTAP4-1Q9BYQ7 146 aa12.91□□□□□ -0.34
C9orf47-202ENST00000375850 C5orf52A6NGY3 159 aa12.9□□□□□ -0.34
C9orf47-202ENST00000375850 IGLV6-57P01721 117 aa12.9□□□□□ -0.34
C9orf47-202ENST00000375850 TSPEAR-AS2P59090 65 aa12.89□□□□□ -0.35
C9orf47-202ENST00000375850 HERVK_113P61574 105 aa12.89□□□□□ -0.35
C9orf47-202ENST00000375850 LCE2DQ5TA82 110 aaPredicted RBP12.89□□□□□ -0.35
C9orf47-202ENST00000375850 CBY1Q9Y3M2 126 aa12.89□□□□□ -0.35
C9orf47-202ENST00000375850 J3QQQ9 107 aa12.88□□□□□ -0.35
C9orf47-202ENST00000375850 YPEL4Q96NS1 127 aa12.88□□□□□ -0.35
C9orf47-202ENST00000375850 H0Y8G0 127 aa12.87□□□□□ -0.35
C9orf47-202ENST00000375850 LEPROTL1O95214 131 aa12.87□□□□□ -0.35
C9orf47-202ENST00000375850 C9orf153Q5TBE3 101 aa12.87□□□□□ -0.35
C9orf47-202ENST00000375850 TRAV23DV6A0A075B6W5 121 aa12.86□□□□□ -0.35
C9orf47-202ENST00000375850 LGALS3P17931 250 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms