RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 A6NJY4 79 aa11.05□□□□□ -0.64
HLA-DMA-201ENST00000374843 C16orf90A8MZG2 172 aa11.05□□□□□ -0.64
HLA-DMA-201ENST00000374843 HINT1P49773 126 aaPredicted RBP11.05□□□□□ -0.64
HLA-DMA-201ENST00000374843 A4D1N5 150 aa11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 GAGE2EQ4V326 116 aa11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 SDIM1Q6ZPB5 146 aa11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 XAGE1AQ9HD64 81 aa11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 GAGE2DQ9UEU5 116 aa11.04□□□□□ -0.64
HLA-DMA-201ENST00000374843 A0A096LNI7 61 aa11.03□□□□□ -0.64
HLA-DMA-201ENST00000374843 NDUFC2O95298 119 aa11.03□□□□□ -0.64
HLA-DMA-201ENST00000374843 KRTAP10-2P60368 255 aa11.03□□□□□ -0.64
HLA-DMA-201ENST00000374843 DNAH8Q96JB1 4490 aa11.02□□□□□ -0.65
HLA-DMA-201ENST00000374843 A0A1B0GWB2 263 aa11.02□□□□□ -0.65
HLA-DMA-201ENST00000374843 SNHG12Q9BXW3 62 aa11.02□□□□□ -0.65
HLA-DMA-201ENST00000374843 PGPEP1Q9NXJ5 209 aa11.02□□□□□ -0.65
HLA-DMA-201ENST00000374843 PLA2G2DQ9UNK4 145 aa11.02□□□□□ -0.65
HLA-DMA-201ENST00000374843 GAGE2BQ13066 116 aa11.01□□□□□ -0.65
HLA-DMA-201ENST00000374843 Q8NDZ9 215 aa11.01□□□□□ -0.65
HLA-DMA-201ENST00000374843 A0A0B4J2C4 111 aa11□□□□□ -0.65
HLA-DMA-201ENST00000374843 A0A1B0GVY2 172 aa11□□□□□ -0.65
HLA-DMA-201ENST00000374843 LINC01620Q4KN68 170 aa11□□□□□ -0.65
HLA-DMA-201ENST00000374843 VPREB1P12018 145 aa10.99□□□□□ -0.65
HLA-DMA-201ENST00000374843 FUSP35637 526 aaKnown RBP eCLIP10.99□□□□□ -0.65
HLA-DMA-201ENST00000374843 LINC00474Q9P2X8 69 aa10.99□□□□□ -0.65
HLA-DMA-201ENST00000374843 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
HLA-DMA-201ENST00000374843 IGKV2-28A0A075B6P5 120 aa10.98□□□□□ -0.65
HLA-DMA-201ENST00000374843 A6NDN8 102 aa10.98□□□□□ -0.65
HLA-DMA-201ENST00000374843 IGKV2D-28P01615 120 aa10.98□□□□□ -0.65
HLA-DMA-201ENST00000374843 NHP2Q9NX24 153 aaKnown RBP10.98□□□□□ -0.65
HLA-DMA-201ENST00000374843 TRBV10-2A0A0K0K1G8 114 aa10.97□□□□□ -0.65
HLA-DMA-201ENST00000374843 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
HLA-DMA-201ENST00000374843 CFC1P0CG37 223 aa10.97□□□□□ -0.65
HLA-DMA-201ENST00000374843 BATFQ16520 125 aa10.97□□□□□ -0.65
HLA-DMA-201ENST00000374843 IGKV2-24A0A0C4DH68 120 aa10.96□□□□□ -0.65
HLA-DMA-201ENST00000374843 CHTF8P0CG12 524 aa10.96□□□□□ -0.65
HLA-DMA-201ENST00000374843 SPACA4Q8TDM5 124 aa10.96□□□□□ -0.65
HLA-DMA-201ENST00000374843 DYNC1H1Q14204 4646 aaKnown RBP10.96□□□□□ -0.66
HLA-DMA-201ENST00000374843 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
HLA-DMA-201ENST00000374843 EPM2AB3EWF7 344 aa10.94□□□□□ -0.66
HLA-DMA-201ENST00000374843 K7ERJ3 54 aa10.94□□□□□ -0.66
HLA-DMA-201ENST00000374843 KRTAP7-1Q8IUC3 87 aa10.94□□□□□ -0.66
HLA-DMA-201ENST00000374843 LINC00337Q8N6G1 96 aa10.94□□□□□ -0.66
HLA-DMA-201ENST00000374843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.94□□□□□ -0.66
HLA-DMA-201ENST00000374843 TRAV13-2A0A0B4J235 113 aa10.93□□□□□ -0.66
HLA-DMA-201ENST00000374843 FAM168BA1KXE4 195 aa10.93□□□□□ -0.66
HLA-DMA-201ENST00000374843 PANO1I0J062 215 aa10.93□□□□□ -0.66
HLA-DMA-201ENST00000374843 PKHD1P08F94 4074 aa10.93□□□□□ -0.66
HLA-DMA-201ENST00000374843 NCR3O14931 201 aa10.92□□□□□ -0.66
HLA-DMA-201ENST00000374843 RAB37Q96AX2 223 aa10.92□□□□□ -0.66
HLA-DMA-201ENST00000374843 M0R378 163 aa10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 PRR3P79522 188 aaKnown RBP10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 COL5A1-AS1Q5SY13 56 aa10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 Q6ZSA8 131 aa10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 PRO1854Q9UHT4 67 aa10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 LRP1BQ9NZR2 4599 aa10.91□□□□□ -0.66
HLA-DMA-201ENST00000374843 A0A1W2PNN7 141 aa10.9□□□□□ -0.66
HLA-DMA-201ENST00000374843 FAM19A5Q7Z5A7 132 aaPredicted RBP10.9□□□□□ -0.66
HLA-DMA-201ENST00000374843 NKAPP1Q8N9T2 125 aa10.9□□□□□ -0.66
HLA-DMA-201ENST00000374843 IGLV6-57P01721 117 aa10.89□□□□□ -0.67
HLA-DMA-201ENST00000374843 RPL13AP40429 203 aaKnown RBP10.89□□□□□ -0.67
HLA-DMA-201ENST00000374843 KRTAP10-1P60331 282 aa10.89□□□□□ -0.67
HLA-DMA-201ENST00000374843 LBHQ53QV2 105 aaPredicted RBP10.88□□□□□ -0.67
HLA-DMA-201ENST00000374843 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
HLA-DMA-201ENST00000374843 M0QXV9 152 aa10.87□□□□□ -0.67
HLA-DMA-201ENST00000374843 C7orf33Q8WU49 177 aa10.87□□□□□ -0.67
HLA-DMA-201ENST00000374843 TMEM126AQ9H061 195 aa10.87□□□□□ -0.67
HLA-DMA-201ENST00000374843 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
HLA-DMA-201ENST00000374843 TAX1BP3O14907 124 aa10.86□□□□□ -0.67
HLA-DMA-201ENST00000374843 MRPL55Q7Z7F7 128 aaKnown RBP10.86□□□□□ -0.67
HLA-DMA-201ENST00000374843 A0A087WYN8 130 aa10.85□□□□□ -0.67
HLA-DMA-201ENST00000374843 TSPAN13O95857 204 aa10.85□□□□□ -0.67
HLA-DMA-201ENST00000374843 TRBV10-3A0A0K0K1G6 114 aa10.84□□□□□ -0.67
HLA-DMA-201ENST00000374843 S100A7L2Q5SY68 101 aa10.84□□□□□ -0.67
HLA-DMA-201ENST00000374843 OR13C6PQ8NH95 151 aa10.83□□□□□ -0.68
HLA-DMA-201ENST00000374843 FAM30AQ9NZY2 134 aa10.83□□□□□ -0.68
HLA-DMA-201ENST00000374843 LINC00167Q96N53 147 aa10.82□□□□□ -0.68
HLA-DMA-201ENST00000374843 CBY1Q9Y3M2 126 aa10.82□□□□□ -0.68
HLA-DMA-201ENST00000374843 IGLV1-50A0A075B6I6 118 aa10.81□□□□□ -0.68
HLA-DMA-201ENST00000374843 C9orf118A6NHY6 69 aa10.81□□□□□ -0.68
HLA-DMA-201ENST00000374843 RPL28P46779 137 aaKnown RBP10.81□□□□□ -0.68
HLA-DMA-201ENST00000374843 GAGE10A6NGK3 116 aa10.8□□□□□ -0.68
HLA-DMA-201ENST00000374843 H7C2G1 150 aa10.8□□□□□ -0.68
HLA-DMA-201ENST00000374843 Q1RN00 199 aa10.8□□□□□ -0.68
HLA-DMA-201ENST00000374843 SMIM11BQ8TCY0 68 aa10.8□□□□□ -0.68
HLA-DMA-201ENST00000374843 KCNQ1DNQ9H478 68 aa10.8□□□□□ -0.68
HLA-DMA-201ENST00000374843 APOBP04114 4563 aaKnown RBP10.79□□□□□ -0.68
HLA-DMA-201ENST00000374843 TRAV23DV6A0A075B6W5 121 aa10.79□□□□□ -0.68
HLA-DMA-201ENST00000374843 PRYO14603 147 aa10.79□□□□□ -0.68
HLA-DMA-201ENST00000374843 PHF5AQ7RTV0 110 aaKnown RBP10.79□□□□□ -0.68
HLA-DMA-201ENST00000374843 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
HLA-DMA-201ENST00000374843 DPH3Q96FX2 82 aa10.78□□□□□ -0.68
HLA-DMA-201ENST00000374843 TRIAP1O43715 76 aa10.77□□□□□ -0.69
HLA-DMA-201ENST00000374843 CIRBP-AS1Q8TBR5 109 aa10.77□□□□□ -0.69
HLA-DMA-201ENST00000374843 RPL37AP8A6NKH3 93 aa10.76□□□□□ -0.69
HLA-DMA-201ENST00000374843 SPRR1AP35321 89 aa10.76□□□□□ -0.69
HLA-DMA-201ENST00000374843 H3BUT2 72 aa10.75□□□□□ -0.69
HLA-DMA-201ENST00000374843 ZNF73O43830 326 aaPredicted RBP10.75□□□□□ -0.69
HLA-DMA-201ENST00000374843 NAA38Q9BRA0 125 aaKnown RBP10.75□□□□□ -0.69
HLA-DMA-201ENST00000374843 DIRC1Q969H9 104 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms