RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 C6orf48Q9UBA6 75 aa9.13□□□□□ -0.95
SLC44A1-202ENST00000374723 SETD2Q9BYW2 2564 aaPredicted RBP9.12□□□□□ -0.95
SLC44A1-202ENST00000374723 LINC00846Q9NV44 126 aa9.11□□□□□ -0.95
SLC44A1-202ENST00000374723 LINC00167Q96N53 147 aa9.1□□□□□ -0.95
SLC44A1-202ENST00000374723 RTL8CO15255 209 aa9.1□□□□□ -0.95
SLC44A1-202ENST00000374723 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
SLC44A1-202ENST00000374723 ATP11AUNQ6ZP68 121 aa9.1□□□□□ -0.95
SLC44A1-202ENST00000374723 PHF5AQ7RTV0 110 aaKnown RBP9.08□□□□□ -0.96
SLC44A1-202ENST00000374723 KIF25-AS1Q9Y6Z4 181 aa9.08□□□□□ -0.96
SLC44A1-202ENST00000374723 Q6ZRP5 223 aa9.08□□□□□ -0.96
SLC44A1-202ENST00000374723 Q96NJ1 140 aa9.07□□□□□ -0.96
SLC44A1-202ENST00000374723 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
SLC44A1-202ENST00000374723 COX6B2Q6YFQ2 88 aa9.07□□□□□ -0.96
SLC44A1-202ENST00000374723 SPINT4Q6UDR6 99 aa9.07□□□□□ -0.96
SLC44A1-202ENST00000374723 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
SLC44A1-202ENST00000374723 URB1-AS1Q96HZ7 61 aa9.06□□□□□ -0.96
SLC44A1-202ENST00000374723 SPATA3Q8NHX4 192 aa9.06□□□□□ -0.96
SLC44A1-202ENST00000374723 PCSK5Q92824 1860 aa9.05□□□□□ -0.96
SLC44A1-202ENST00000374723 LINC00315P59091 139 aa9.05□□□□□ -0.96
SLC44A1-202ENST00000374723 Q8NBF4 154 aa9.05□□□□□ -0.96
SLC44A1-202ENST00000374723 ZNF462Q96JM2 2506 aa9.05□□□□□ -0.96
SLC44A1-202ENST00000374723 PKD1L2Q7Z442 2459 aa9.03□□□□□ -0.96
SLC44A1-202ENST00000374723 COX8CQ7Z4L0 72 aa9.02□□□□□ -0.96
SLC44A1-202ENST00000374723 USP9XQ93008 2570 aaPredicted RBP9.02□□□□□ -0.97
SLC44A1-202ENST00000374723 EPM2AB3EWF7 344 aa9.02□□□□□ -0.97
SLC44A1-202ENST00000374723 RPL37AP61513 92 aaKnown RBP9.02□□□□□ -0.97
SLC44A1-202ENST00000374723 NBDYA0A0U1RRE5 68 aa9.01□□□□□ -0.97
SLC44A1-202ENST00000374723 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
SLC44A1-202ENST00000374723 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
SLC44A1-202ENST00000374723 LINC00476Q8WZB0 136 aa9.01□□□□□ -0.97
SLC44A1-202ENST00000374723 SRCAPQ6ZRS2 3230 aa9□□□□□ -0.97
SLC44A1-202ENST00000374723 LINC00310P59036 64 aa8.99□□□□□ -0.97
SLC44A1-202ENST00000374723 ANKRD11Q6UB99 2663 aaPredicted RBP8.97□□□□□ -0.97
SLC44A1-202ENST00000374723 IGHV3OR16-9A0A0B4J2B5 98 aa8.97□□□□□ -0.97
SLC44A1-202ENST00000374723 H3BNG1 76 aa8.97□□□□□ -0.97
SLC44A1-202ENST00000374723 ELOF1P60002 83 aaKnown RBP8.97□□□□□ -0.97
SLC44A1-202ENST00000374723 Q6ZRX8 168 aa8.97□□□□□ -0.97
SLC44A1-202ENST00000374723 IGLV5-39A0A0G2JS06 123 aa8.95□□□□□ -0.98
SLC44A1-202ENST00000374723 WWC2-AS2Q96NR7 200 aa8.95□□□□□ -0.98
SLC44A1-202ENST00000374723 A0A096LNJ9 63 aa8.95□□□□□ -0.98
SLC44A1-202ENST00000374723 C8orf87E5RJ46 101 aa8.95□□□□□ -0.98
SLC44A1-202ENST00000374723 BCE1O60756 84 aa8.95□□□□□ -0.98
SLC44A1-202ENST00000374723 SSBP3-AS1Q7Z2R9 100 aa8.94□□□□□ -0.98
SLC44A1-202ENST00000374723 A0A1B0GW54 56 aa8.94□□□□□ -0.98
SLC44A1-202ENST00000374723 LINC00588Q9Y4M8 146 aa8.93□□□□□ -0.98
SLC44A1-202ENST00000374723 H3BPC8 53 aa8.92□□□□□ -0.98
SLC44A1-202ENST00000374723 KRTAP24-1Q3LI83 254 aa8.92□□□□□ -0.98
SLC44A1-202ENST00000374723 ST20-AS1Q8NBB2 130 aa8.92□□□□□ -0.98
SLC44A1-202ENST00000374723 APLNQ9ULZ1 77 aa8.91□□□□□ -0.98
SLC44A1-202ENST00000374723 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
SLC44A1-202ENST00000374723 COL4A2P08572 1712 aa8.89□□□□□ -0.99
SLC44A1-202ENST00000374723 Q6ZQT0 140 aa8.89□□□□□ -0.99
SLC44A1-202ENST00000374723 CDIP1Q9H305 208 aa8.88□□□□□ -0.99
SLC44A1-202ENST00000374723 GVQW2A0A096LPI5 108 aaPredicted RBP8.87□□□□□ -0.99
SLC44A1-202ENST00000374723 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
SLC44A1-202ENST00000374723 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
SLC44A1-202ENST00000374723 PRO0628Q9UI54 55 aa8.86□□□□□ -0.99
SLC44A1-202ENST00000374723 FAM218AQ96MZ4 157 aa8.86□□□□□ -0.99
SLC44A1-202ENST00000374723 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
SLC44A1-202ENST00000374723 LOC110117498A0A087WWA1 95 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 C9orf92A6NGG3 77 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 CRIPTQ9P021 101 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 LINC01546A6NGU7 62 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 Q8NAQ8 132 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 FAM19A4Q96LR4 140 aa8.85□□□□□ -0.99
SLC44A1-202ENST00000374723 A8MWP4 228 aa8.84□□□□□ -0.99
SLC44A1-202ENST00000374723 USP9YO00507 2555 aaPredicted RBP8.84□□□□□ -0.99
SLC44A1-202ENST00000374723 MTORP42345 2549 aa8.84□□□□□ -0.99
SLC44A1-202ENST00000374723 LINC00304Q8N9R0 145 aa8.84□□□□□ -1
SLC44A1-202ENST00000374723 POLQO75417 2590 aa8.83□□□□□ -1
SLC44A1-202ENST00000374723 TM2D3Q9BRN9 247 aa8.82□□□□□ -1
SLC44A1-202ENST00000374723 C4orf26Q17RF5 130 aa8.82□□□□□ -1
SLC44A1-202ENST00000374723 IGLV5-45A0A087WSX0 123 aa8.82□□□□□ -1
SLC44A1-202ENST00000374723 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
SLC44A1-202ENST00000374723 MRPL34Q9BQ48 92 aaKnown RBP8.82□□□□□ -1
SLC44A1-202ENST00000374723 TRBV7-4A0A0J9YYF1 115 aa8.81□□□□□ -1
SLC44A1-202ENST00000374723 OBSCN-AS1Q96MR7 158 aa8.81□□□□□ -1
SLC44A1-202ENST00000374723 DSCR10P59022 87 aa8.8□□□□□ -1
SLC44A1-202ENST00000374723 IGLV6-57P01721 117 aa8.79□□□□□ -1
SLC44A1-202ENST00000374723 VPREB1P12018 145 aa8.79□□□□□ -1
SLC44A1-202ENST00000374723 CENPFP49454 3210 aa8.78□□□□□ -1
SLC44A1-202ENST00000374723 RBM12B-AS1Q9P1G2 102 aa8.78□□□□□ -1
SLC44A1-202ENST00000374723 FASNP49327 2511 aaKnown RBP8.77□□□□□ -1.01
SLC44A1-202ENST00000374723 K7EQZ3 153 aa8.77□□□□□ -1.01
SLC44A1-202ENST00000374723 UQCR11O14957 56 aa8.76□□□□□ -1.01
SLC44A1-202ENST00000374723 COA5Q86WW8 74 aa8.76□□□□□ -1.01
SLC44A1-202ENST00000374723 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
SLC44A1-202ENST00000374723 SMR3BP02814 79 aaPredicted RBP8.75□□□□□ -1.01
SLC44A1-202ENST00000374723 USP24Q9UPU5 2620 aa8.75□□□□□ -1.01
SLC44A1-202ENST00000374723 LINC01554Q52M75 96 aa8.75□□□□□ -1.01
SLC44A1-202ENST00000374723 CHD8Q9HCK8 2581 aa8.73□□□□□ -1.01
SLC44A1-202ENST00000374723 BPTFQ12830 3046 aa8.73□□□□□ -1.01
SLC44A1-202ENST00000374723 C9orf129Q5T035 196 aaKnown RBP8.73□□□□□ -1.01
SLC44A1-202ENST00000374723 CR1P17927 2039 aa8.72□□□□□ -1.01
SLC44A1-202ENST00000374723 C10orf142B7Z368 130 aa8.72□□□□□ -1.01
SLC44A1-202ENST00000374723 MIR22HGQ0VDD5 57 aa8.71□□□□□ -1.02
SLC44A1-202ENST00000374723 ZNF861PO60384 105 aa8.7□□□□□ -1.02
SLC44A1-202ENST00000374723 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
SLC44A1-202ENST00000374723 IGLV1-50A0A075B6I6 118 aa8.7□□□□□ -1.02
SLC44A1-202ENST00000374723 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms