RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CUBNO60494 3623 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 LINC00208Q96KT6 92 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 EML6Q6ZMW3 1958 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 PRR4Q16378 134 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 SPINK6Q6UWN8 80 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 PLAC8L1A1L4L8 177 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 BCE1O60756 84 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 DCANP1Q8TF63 244 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 CLUHP3Q96NS8 147 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 LIMD2Q9BT23 127 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 ANKRD17O75179 2603 aaKnown RBP4.56□□□□□ -1.68
PTPN3-202ENST00000374541 IGLV1-51P01701 117 aa4.56□□□□□ -1.68
PTPN3-202ENST00000374541 IGKV2-28A0A075B6P5 120 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 IGKV2D-28P01615 120 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 Q8N814 137 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 CRIP1P50238 77 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 CXCL6P80162 114 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 C1orf137Q5JT78 98 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 EXPH5Q8NEV8 1989 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 BRWD1-AS2P59051 145 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 ACANP16112 2415 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 LINC00336Q6ZUF6 198 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 CELA1Q9UNI1 258 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 ESRGQ1W209 222 aa4.55□□□□□ -1.68
PTPN3-202ENST00000374541 RNASE3P12724 160 aaKnown RBP4.54□□□□□ -1.68
PTPN3-202ENST00000374541 CENPEQ02224 2701 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 RAI1Q7Z5J4 1906 aaPredicted RBP4.54□□□□□ -1.68
PTPN3-202ENST00000374541 NCOA6Q14686 2063 aaPredicted RBP4.54□□□□□ -1.68
PTPN3-202ENST00000374541 LINC01561Q8N1V8 128 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 CDC42SE2Q9NRR3 84 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 REG3GQ6UW15 175 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 ZANQ9Y493 2812 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 NUP210LQ5VU65 1888 aa4.54□□□□□ -1.68
PTPN3-202ENST00000374541 SETXQ7Z333 2677 aaKnown RBP4.53□□□□□ -1.68
PTPN3-202ENST00000374541 IGIPA6NJ69 53 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 TMEM254Q8TBM7 123 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 PPDPFQ9H3Y8 114 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 K7EIL1 84 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 Q8N3U1 123 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 CSDC2Q9Y534 153 aaKnown RBP4.53□□□□□ -1.68
PTPN3-202ENST00000374541 FBN2P35556 2912 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 SOSTDC1Q6X4U4 206 aa4.53□□□□□ -1.68
PTPN3-202ENST00000374541 A0A1B0GW54 56 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 RPS28P62857 69 aaKnown RBP4.52□□□□□ -1.69
PTPN3-202ENST00000374541 KIAA1549Q9HCM3 1950 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 Q8N6K4 173 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 ARHGAP32A7KAX9 2087 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 TENM4Q6N022 2769 aa4.52□□□□□ -1.69
PTPN3-202ENST00000374541 LINC00242Q5T6M2 205 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 IGLV9-49A0A0B4J1Y8 123 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 SMIM1B2RUZ4 78 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 H0Y9P7 68 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 NIPBLQ6KC79 2804 aaeCLIP4.51□□□□□ -1.69
PTPN3-202ENST00000374541 A8MZ25 164 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 HCG22E2RYF7 251 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 AKAP9Q99996 3911 aa4.51□□□□□ -1.69
PTPN3-202ENST00000374541 C2orf48Q96LS8 159 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 IGSF10Q6WRI0 2623 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 H3BPC8 53 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 LINC01547P58512 204 aaPredicted RBP4.5□□□□□ -1.69
PTPN3-202ENST00000374541 IGLV1-40P01703 118 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 SERTAD4-AS1Q5TG53 156 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 MXRA5Q9NR99 2828 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 TP53AIP1Q9HCN2 124 aa4.5□□□□□ -1.69
PTPN3-202ENST00000374541 A0A087WVE0 104 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 LOC100131303A0A0U1RQF7 123 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 COX8CQ7Z4L0 72 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 C11orf21Q9P2W6 132 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 RPL37AP8A6NKH3 93 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 BEAN1Q3B7T3 259 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 Q6ZPA2 131 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 AMELXQ99217 191 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 IGHV6-1A0A0B4J1U7 121 aa4.49□□□□□ -1.69
PTPN3-202ENST00000374541 PSPHP1O15172 72 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 Q8N2B8 174 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 CRYGAP11844 174 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 PRR9Q5T870 116 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 ZNF580Q9UK33 172 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 Q6ZSN1 163 aa4.48□□□□□ -1.69
PTPN3-202ENST00000374541 Q9BRP9 147 aa4.47□□□□□ -1.69
PTPN3-202ENST00000374541 USP9YO00507 2555 aaPredicted RBP4.47□□□□□ -1.69
PTPN3-202ENST00000374541 A0A087WYN8 130 aa4.47□□□□□ -1.69
PTPN3-202ENST00000374541 LINC00575Q6W349 94 aa4.47□□□□□ -1.69
PTPN3-202ENST00000374541 CRIP3Q6Q6R5 217 aa4.47□□□□□ -1.69
PTPN3-202ENST00000374541 A0A1B0GUV1 79 aa4.46□□□□□ -1.69
PTPN3-202ENST00000374541 CRIP2P52943 208 aaPredicted RBP4.46□□□□□ -1.69
PTPN3-202ENST00000374541 UNQ6190/PRO20217Q6UXQ8 127 aa4.46□□□□□ -1.69
PTPN3-202ENST00000374541 PCOTHQ58A44 107 aa4.46□□□□□ -1.7
PTPN3-202ENST00000374541 A0A087WSZ3 146 aa4.46□□□□□ -1.7
PTPN3-202ENST00000374541 WIPF1O43516 503 aa4.46□□□□□ -1.7
PTPN3-202ENST00000374541 RPL37AP61513 92 aaKnown RBP4.46□□□□□ -1.7
PTPN3-202ENST00000374541 CASC10Q5T4H9 136 aa4.46□□□□□ -1.7
PTPN3-202ENST00000374541 C1orf64Q8NEQ6 169 aa4.46□□□□□ -1.7
PTPN3-202ENST00000374541 NBDYA0A0U1RRE5 68 aa4.45□□□□□ -1.7
PTPN3-202ENST00000374541 A0A1B0GU69 56 aa4.45□□□□□ -1.7
PTPN3-202ENST00000374541 EDN2P20800 178 aa4.45□□□□□ -1.7
PTPN3-202ENST00000374541 KRTAP21-3Q3LHN1 58 aa4.45□□□□□ -1.7
PTPN3-202ENST00000374541 LINC00310P59036 64 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms