RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 CCKP06307 115 aa11.6□□□□□ -0.55
PHF1-202ENST00000374516 RPS28P62857 69 aaKnown RBP11.6□□□□□ -0.55
PHF1-202ENST00000374516 RETNQ9HD89 108 aa11.6□□□□□ -0.55
PHF1-202ENST00000374516 SPART-AS1P0CW21 52 aa11.59□□□□□ -0.55
PHF1-202ENST00000374516 C11orf68Q9H3H3 251 aaKnown RBP11.59□□□□□ -0.55
PHF1-202ENST00000374516 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
PHF1-202ENST00000374516 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
PHF1-202ENST00000374516 FAM19A5Q7Z5A7 132 aaPredicted RBP11.58□□□□□ -0.56
PHF1-202ENST00000374516 LINC00167Q96N53 147 aa11.57□□□□□ -0.56
PHF1-202ENST00000374516 TENM3Q9P273 2699 aa11.57□□□□□ -0.56
PHF1-202ENST00000374516 NBEAL1Q6ZS30 2694 aa11.56□□□□□ -0.56
PHF1-202ENST00000374516 XCL1P47992 114 aa11.55□□□□□ -0.56
PHF1-202ENST00000374516 CLPSL2Q6UWE3 100 aa11.55□□□□□ -0.56
PHF1-202ENST00000374516 JMJD7-PLA2G4BH0Y9G9 81 aa11.55□□□□□ -0.56
PHF1-202ENST00000374516 NANOS2P60321 138 aaKnown RBP11.55□□□□□ -0.56
PHF1-202ENST00000374516 PRR3P79522 188 aaKnown RBP11.55□□□□□ -0.56
PHF1-202ENST00000374516 EGFEM1PQ0D2K5 195 aa11.55□□□□□ -0.56
PHF1-202ENST00000374516 Q8N814 137 aa11.55□□□□□ -0.56
PHF1-202ENST00000374516 TMEM258P61165 79 aa11.54□□□□□ -0.56
PHF1-202ENST00000374516 Q8IZM0 81 aa11.54□□□□□ -0.56
PHF1-202ENST00000374516 Q8N3U1 123 aa11.54□□□□□ -0.56
PHF1-202ENST00000374516 TMEM256-PLSCR3K7ERE1 68 aa11.53□□□□□ -0.56
PHF1-202ENST00000374516 S100A7L2Q5SY68 101 aa11.53□□□□□ -0.56
PHF1-202ENST00000374516 DPH3Q96FX2 82 aa11.53□□□□□ -0.56
PHF1-202ENST00000374516 A0A1B0GUV1 79 aa11.51□□□□□ -0.57
PHF1-202ENST00000374516 DNAH3Q8TD57 4116 aa11.49□□□□□ -0.57
PHF1-202ENST00000374516 LYPD5Q6UWN5 251 aa11.49□□□□□ -0.57
PHF1-202ENST00000374516 LINC00269Q8N2A0 174 aa11.49□□□□□ -0.57
PHF1-202ENST00000374516 NDUFC2O95298 119 aa11.48□□□□□ -0.57
PHF1-202ENST00000374516 PRB2P02812 416 aaPredicted RBP11.48□□□□□ -0.57
PHF1-202ENST00000374516 ATP5EP2Q5VTU8 51 aa11.48□□□□□ -0.57
PHF1-202ENST00000374516 ANGP03950 147 aaKnown RBP11.47□□□□□ -0.57
PHF1-202ENST00000374516 FAM19A1Q7Z5A9 133 aa11.47□□□□□ -0.57
PHF1-202ENST00000374516 COX17Q14061 63 aa11.46□□□□□ -0.57
PHF1-202ENST00000374516 KIAA0087Q14695 138 aa11.46□□□□□ -0.57
PHF1-202ENST00000374516 C5orf47Q569G3 176 aa11.46□□□□□ -0.57
PHF1-202ENST00000374516 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
PHF1-202ENST00000374516 MGAM2Q2M2H8 2515 aa11.46□□□□□ -0.58
PHF1-202ENST00000374516 IGLV10-54A0A075B6I4 117 aa11.45□□□□□ -0.58
PHF1-202ENST00000374516 TRAV23DV6A0A075B6W5 121 aa11.45□□□□□ -0.58
PHF1-202ENST00000374516 GHRHP01286 108 aa11.45□□□□□ -0.58
PHF1-202ENST00000374516 DSCR8Q96T75 97 aa11.45□□□□□ -0.58
PHF1-202ENST00000374516 Q6ZTC4 211 aa11.44□□□□□ -0.58
PHF1-202ENST00000374516 C6orf99Q4VX62 202 aa11.44□□□□□ -0.58
PHF1-202ENST00000374516 UBL5Q9BZL1 73 aa11.44□□□□□ -0.58
PHF1-202ENST00000374516 TRBV10-3A0A0K0K1G6 114 aa11.43□□□□□ -0.58
PHF1-202ENST00000374516 A0A0J9YWU9 116 aa11.43□□□□□ -0.58
PHF1-202ENST00000374516 REG3AQ06141 175 aa11.42□□□□□ -0.58
PHF1-202ENST00000374516 C9orf116Q5BN46 136 aaPredicted RBP11.42□□□□□ -0.58
PHF1-202ENST00000374516 OXTP01178 125 aa11.42□□□□□ -0.58
PHF1-202ENST00000374516 LELP1Q5T871 98 aa11.42□□□□□ -0.58
PHF1-202ENST00000374516 CD164L2Q6UWJ8 174 aa11.42□□□□□ -0.58
PHF1-202ENST00000374516 LINC00575Q6W349 94 aa11.41□□□□□ -0.58
PHF1-202ENST00000374516 Q8NDZ9 215 aa11.41□□□□□ -0.58
PHF1-202ENST00000374516 CHCHD10Q8WYQ3 142 aaPredicted RBP11.4□□□□□ -0.58
PHF1-202ENST00000374516 RBM3P98179 157 aaKnown RBP11.4□□□□□ -0.59
PHF1-202ENST00000374516 KPRPQ5T749 579 aaPredicted RBP11.4□□□□□ -0.59
PHF1-202ENST00000374516 Q6ZQT0 140 aa11.38□□□□□ -0.59
PHF1-202ENST00000374516 KLK12Q9UKR0 248 aa11.38□□□□□ -0.59
PHF1-202ENST00000374516 NDUFC2-KCTD14E9PQ53 114 aa11.37□□□□□ -0.59
PHF1-202ENST00000374516 MRAPQ8TCY5 172 aa11.37□□□□□ -0.59
PHF1-202ENST00000374516 C11orf45Q8TAV5 145 aa11.36□□□□□ -0.59
PHF1-202ENST00000374516 LOC110117498A0A087WWA1 95 aa11.35□□□□□ -0.59
PHF1-202ENST00000374516 ZNF561-AS1K7EIQ3 104 aa11.35□□□□□ -0.59
PHF1-202ENST00000374516 C20orf197Q8N268 126 aa11.35□□□□□ -0.59
PHF1-202ENST00000374516 LAMTOR3Q9UHA4 124 aa11.35□□□□□ -0.59
PHF1-202ENST00000374516 WFDC10BQ8IUB3 73 aa11.34□□□□□ -0.59
PHF1-202ENST00000374516 C6orf223Q8N319 242 aa11.34□□□□□ -0.59
PHF1-202ENST00000374516 DEFB131BA0A096LNP1 70 aa11.33□□□□□ -0.6
PHF1-202ENST00000374516 M0R2N4 97 aa11.33□□□□□ -0.6
PHF1-202ENST00000374516 K7EIL1 84 aa11.32□□□□□ -0.6
PHF1-202ENST00000374516 LINC01547P58512 204 aaPredicted RBP11.32□□□□□ -0.6
PHF1-202ENST00000374516 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
PHF1-202ENST00000374516 H3BNG1 76 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 BCE1O60756 84 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 C4orf26Q17RF5 130 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 Q5XG85 94 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 PRR34Q9NV39 138 aa11.31□□□□□ -0.6
PHF1-202ENST00000374516 HAMPP81172 84 aa11.3□□□□□ -0.6
PHF1-202ENST00000374516 ESRGQ1W209 222 aa11.3□□□□□ -0.6
PHF1-202ENST00000374516 IGLV6-57P01721 117 aa11.3□□□□□ -0.6
PHF1-202ENST00000374516 Q6ZVQ6 151 aa11.3□□□□□ -0.6
PHF1-202ENST00000374516 TRAV7A0A075B6U4 112 aa11.29□□□□□ -0.6
PHF1-202ENST00000374516 Q6ZQY7 126 aa11.28□□□□□ -0.6
PHF1-202ENST00000374516 MDFIQ99750 246 aa11.28□□□□□ -0.6
PHF1-202ENST00000374516 HUWE1Q7Z6Z7 4374 aaKnown RBP11.28□□□□□ -0.6
PHF1-202ENST00000374516 MUC7Q8TAX7 377 aa11.27□□□□□ -0.6
PHF1-202ENST00000374516 TRAV10A0A0B4J240 114 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 PDE6GP18545 87 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 FAM236DA0A1B0GTK5 79 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 H7BZZ5 65 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 FAM236CP0DP71 79 aa11.26□□□□□ -0.61
PHF1-202ENST00000374516 TM2D3Q9BRN9 247 aa11.25□□□□□ -0.61
PHF1-202ENST00000374516 H3BQ85 93 aa11.25□□□□□ -0.61
PHF1-202ENST00000374516 COL7A1Q02388 2944 aa11.24□□□□□ -0.61
PHF1-202ENST00000374516 CXCL6P80162 114 aa11.24□□□□□ -0.61
PHF1-202ENST00000374516 HRCT1Q6UXD1 115 aa11.24□□□□□ -0.61
PHF1-202ENST00000374516 KLKP1Q107X0 134 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms