RNA–Protein interactions for RNA: ENST00000373222.3

CHD6-202, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 2,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-202ENST00000373222 C22orf24Q9Y442 160 aa4.4□□□□□ -1.71
CHD6-202ENST00000373222 BAHCC1Q9P281 2608 aa4.4□□□□□ -1.71
CHD6-202ENST00000373222 COX6CP09669 75 aa4.39□□□□□ -1.71
CHD6-202ENST00000373222 LINC00158P58513 81 aa4.39□□□□□ -1.71
CHD6-202ENST00000373222 PRR3P79522 188 aaKnown RBP4.39□□□□□ -1.71
CHD6-202ENST00000373222 C9orf129Q5T035 196 aaKnown RBP4.39□□□□□ -1.71
CHD6-202ENST00000373222 LYSTQ99698 3801 aa4.39□□□□□ -1.71
CHD6-202ENST00000373222 LINC00959A0A1B0GUT2 108 aa4.39□□□□□ -1.71
CHD6-202ENST00000373222 CELA1Q9UNI1 258 aa4.39□□□□□ -1.71
CHD6-202ENST00000373222 COX7A2LO14548 114 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 ATP5G1P05496 136 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 CCL18P55774 89 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 LINC00526Q96FQ7 95 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 A0A087WYN8 130 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 C9orf116Q5BN46 136 aaPredicted RBP4.38□□□□□ -1.71
CHD6-202ENST00000373222 SND1-IT1Q9HBX3 110 aa4.38□□□□□ -1.71
CHD6-202ENST00000373222 TEX29Q8N6K0 151 aa4.37□□□□□ -1.71
CHD6-202ENST00000373222 C15orf53Q8NAA6 179 aa4.37□□□□□ -1.71
CHD6-202ENST00000373222 HTN3P15516 51 aa4.37□□□□□ -1.71
CHD6-202ENST00000373222 LINC00269Q8N2A0 174 aa4.37□□□□□ -1.71
CHD6-202ENST00000373222 SMIM11BQ8TCY0 68 aa4.37□□□□□ -1.71
CHD6-202ENST00000373222 H3BT86 120 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 SLPIP03973 132 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 Q8NDZ9 215 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 SMCR5Q8TEV8 140 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 WWC2-AS2Q96NR7 200 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 TENM2Q9NT68 2774 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 CRPP02741 224 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 LINC00612Q8N6U2 182 aa4.36□□□□□ -1.71
CHD6-202ENST00000373222 SNCGO76070 127 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 BAALC-AS2P0C853 105 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 CMC4P56277 68 aaPredicted RBP4.35□□□□□ -1.71
CHD6-202ENST00000373222 LINC01600Q96MT4 127 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 MRPL55Q7Z7F7 128 aaKnown RBP4.35□□□□□ -1.71
CHD6-202ENST00000373222 C6orf223Q8N319 242 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 OR13C6PQ8NH95 151 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 PRO0255Q9UI72 69 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 COL7A1Q02388 2944 aa4.35□□□□□ -1.71
CHD6-202ENST00000373222 ANGP03950 147 aaKnown RBP4.34□□□□□ -1.71
CHD6-202ENST00000373222 LINC00476Q8WZB0 136 aa4.34□□□□□ -1.71
CHD6-202ENST00000373222 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
CHD6-202ENST00000373222 IGLV5-52A0A0A0MRZ9 124 aa4.34□□□□□ -1.72
CHD6-202ENST00000373222 C10orf25Q5T742 122 aa4.34□□□□□ -1.72
CHD6-202ENST00000373222 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.72
CHD6-202ENST00000373222 LECT2O14960 151 aa4.33□□□□□ -1.72
CHD6-202ENST00000373222 RPL28P46779 137 aaKnown RBP4.33□□□□□ -1.72
CHD6-202ENST00000373222 KIAA0087Q14695 138 aa4.33□□□□□ -1.72
CHD6-202ENST00000373222 Q8NAQ8 132 aa4.33□□□□□ -1.72
CHD6-202ENST00000373222 CHCHD10Q8WYQ3 142 aaPredicted RBP4.33□□□□□ -1.72
CHD6-202ENST00000373222 MGAM2Q2M2H8 2515 aa4.33□□□□□ -1.72
CHD6-202ENST00000373222 TRAV13-2A0A0B4J235 113 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 CCDC179H3BU77 68 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
CHD6-202ENST00000373222 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
CHD6-202ENST00000373222 DAD1P61803 113 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 REG3AQ06141 175 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 SS18Q15532 418 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 DEFB121Q5J5C9 76 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 C3orf56Q8N813 242 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 C14orf132Q9NPU4 83 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 A0A1B0GUV1 79 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 NCR3O14931 201 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 TRACP01848 142 aa4.32□□□□□ -1.72
CHD6-202ENST00000373222 STAB2Q8WWQ8 2551 aa4.31□□□□□ -1.72
CHD6-202ENST00000373222 C9orf66Q5T8R8 295 aa4.31□□□□□ -1.72
CHD6-202ENST00000373222 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
CHD6-202ENST00000373222 Q8IZM0 81 aa4.31□□□□□ -1.72
CHD6-202ENST00000373222 KLK12Q9UKR0 248 aa4.31□□□□□ -1.72
CHD6-202ENST00000373222 DNAH3Q8TD57 4116 aa4.3□□□□□ -1.72
CHD6-202ENST00000373222 COPS9Q8WXC6 57 aa4.3□□□□□ -1.72
CHD6-202ENST00000373222 DNAH10Q8IVF4 4471 aa4.3□□□□□ -1.72
CHD6-202ENST00000373222 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
CHD6-202ENST00000373222 DNAL4O96015 105 aa4.29□□□□□ -1.72
CHD6-202ENST00000373222 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
CHD6-202ENST00000373222 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
CHD6-202ENST00000373222 FAM236AA0A1B0GUQ0 79 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 FAM236BA0A1B0GV22 79 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 C8orf87E5RJ46 101 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 KRTAP10-11P60412 298 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 ENHOQ6UWT2 76 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 WFDC10BQ8IUB3 73 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 CYSRT1A8MQ03 144 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 XAGE1AQ9HD64 81 aa4.28□□□□□ -1.72
CHD6-202ENST00000373222 SPAG11BQ08648 103 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 C6orf99Q4VX62 202 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 SDIM1Q6ZPB5 146 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 DNAH7Q8WXX0 4024 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 SPART-AS1P0CW21 52 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
CHD6-202ENST00000373222 A0A087WVE0 104 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 IGKV3D-7A0A0C4DH55 119 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 TRBV7-7A0A0K0K1E9 115 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 MIFP14174 115 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 CXCL5P42830 114 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 Q6Q795 121 aa4.26□□□□□ -1.73
CHD6-202ENST00000373222 Q6ZTC4 211 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms