RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RPL37AP8A6NKH3 93 aa11.51□□□□□ -0.57
TRAPPC3-204ENST00000373166 PLNP26678 52 aa11.51□□□□□ -0.57
TRAPPC3-204ENST00000373166 LINC00158P58513 81 aa11.5□□□□□ -0.57
TRAPPC3-204ENST00000373166 ZNF861PO60384 105 aa11.49□□□□□ -0.57
TRAPPC3-204ENST00000373166 BCE1O60756 84 aa11.49□□□□□ -0.57
TRAPPC3-204ENST00000373166 RPL24P83731 157 aaKnown RBP11.49□□□□□ -0.57
TRAPPC3-204ENST00000373166 DPM2O94777 84 aa11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 KRTAP1-4P0C5Y4 121 aa11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 VPREB1P12018 145 aa11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 RPL13AP40429 203 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 RPL28P46779 137 aaKnown RBP11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 HERV-K104P63124 156 aa11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 MEIG1Q5JSS6 88 aa11.47□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BKO60814 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 ATP6V1G1O75348 118 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BJP06899 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BOP23527 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BBP33778 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BDP58876 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HERVK_113P61574 105 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BCP62807 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST2H2BEQ16778 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BHQ93079 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BNQ99877 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 HIST1H2BMQ99879 126 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 MAP1LC3CQ9BXW4 147 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 NDUFA12Q9UI09 145 aa11.46□□□□□ -0.57
TRAPPC3-204ENST00000373166 IGKV2-28A0A075B6P5 120 aa11.45□□□□□ -0.58
TRAPPC3-204ENST00000373166 A0A0U1RRA0 63 aa11.45□□□□□ -0.58
TRAPPC3-204ENST00000373166 MYMXA0A1B0GTQ4 84 aa11.45□□□□□ -0.58
TRAPPC3-204ENST00000373166 IGKV2D-28P01615 120 aa11.45□□□□□ -0.58
TRAPPC3-204ENST00000373166 LINC00587B1AMM8 73 aa11.44□□□□□ -0.58
TRAPPC3-204ENST00000373166 IGKCP01834 107 aa11.44□□□□□ -0.58
TRAPPC3-204ENST00000373166 PLEKHB2Q96CS7 222 aa11.44□□□□□ -0.58
TRAPPC3-204ENST00000373166 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
TRAPPC3-204ENST00000373166 LEPROTO15243 131 aa11.43□□□□□ -0.58
TRAPPC3-204ENST00000373166 SMIM13P0DJ93 91 aa11.43□□□□□ -0.58
TRAPPC3-204ENST00000373166 UBE2AP49459 152 aa11.42□□□□□ -0.58
TRAPPC3-204ENST00000373166 TSPEAR-AS2P59090 65 aa11.41□□□□□ -0.58
TRAPPC3-204ENST00000373166 MIR7-3HGQ8N6C7 128 aa11.4□□□□□ -0.58
TRAPPC3-204ENST00000373166 Q8NDZ9 215 aa11.4□□□□□ -0.58
TRAPPC3-204ENST00000373166 FAT4Q6V0I7 4981 aa11.4□□□□□ -0.58
TRAPPC3-204ENST00000373166 J3QQQ9 107 aa11.39□□□□□ -0.59
TRAPPC3-204ENST00000373166 LGALS3P17931 250 aaKnown RBP11.39□□□□□ -0.59
TRAPPC3-204ENST00000373166 NMUP48645 174 aa11.38□□□□□ -0.59
TRAPPC3-204ENST00000373166 BOD1L2Q8IYS8 172 aa11.38□□□□□ -0.59
TRAPPC3-204ENST00000373166 TMEM126AQ9H061 195 aa11.38□□□□□ -0.59
TRAPPC3-204ENST00000373166 SYS1-DBNDD2H3BUS1 97 aa11.37□□□□□ -0.59
TRAPPC3-204ENST00000373166 TMEM238C9JI98 176 aa11.36□□□□□ -0.59
TRAPPC3-204ENST00000373166 M0R378 163 aa11.36□□□□□ -0.59
TRAPPC3-204ENST00000373166 FAM19A1Q7Z5A9 133 aa11.36□□□□□ -0.59
TRAPPC3-204ENST00000373166 KRTAP13-1Q8IUC0 172 aa11.36□□□□□ -0.59
TRAPPC3-204ENST00000373166 KRTAP9-6A0A140TA67 174 aa11.35□□□□□ -0.59
TRAPPC3-204ENST00000373166 TSPAN13O95857 204 aa11.35□□□□□ -0.59
TRAPPC3-204ENST00000373166 LCE2AQ5TA79 106 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC3-204ENST00000373166 NCR3O14931 201 aa11.33□□□□□ -0.6
TRAPPC3-204ENST00000373166 PRLHP81277 87 aa11.33□□□□□ -0.6
TRAPPC3-204ENST00000373166 E9PLD3 99 aa11.32□□□□□ -0.6
TRAPPC3-204ENST00000373166 PET117Q6UWS5 81 aa11.32□□□□□ -0.6
TRAPPC3-204ENST00000373166 IGKV2D-26A0A0A0MRZ7 120 aa11.31□□□□□ -0.6
TRAPPC3-204ENST00000373166 COA6Q5JTJ3 125 aaKnown RBP11.31□□□□□ -0.6
TRAPPC3-204ENST00000373166 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
TRAPPC3-204ENST00000373166 DAND5Q8N907 189 aa11.31□□□□□ -0.6
TRAPPC3-204ENST00000373166 MIEN1Q9BRT3 115 aa11.3□□□□□ -0.6
TRAPPC3-204ENST00000373166 PRYO14603 147 aa11.29□□□□□ -0.6
TRAPPC3-204ENST00000373166 CRYGAP11844 174 aa11.29□□□□□ -0.6
TRAPPC3-204ENST00000373166 LOC107984156A0A0G2JMH3 177 aa11.27□□□□□ -0.61
TRAPPC3-204ENST00000373166 C3orf79P0CE67 100 aa11.27□□□□□ -0.61
TRAPPC3-204ENST00000373166 KRTDAPP60985 99 aa11.27□□□□□ -0.61
TRAPPC3-204ENST00000373166 ARL17AQ8IVW1 177 aa11.27□□□□□ -0.61
TRAPPC3-204ENST00000373166 A0A087X002 238 aa11.26□□□□□ -0.61
TRAPPC3-204ENST00000373166 A0A0J9YXY3 114 aa11.26□□□□□ -0.61
TRAPPC3-204ENST00000373166 S100A12P80511 92 aa11.26□□□□□ -0.61
TRAPPC3-204ENST00000373166 S100A1P23297 94 aa11.25□□□□□ -0.61
TRAPPC3-204ENST00000373166 HIGD2AQ9BW72 106 aa11.25□□□□□ -0.61
TRAPPC3-204ENST00000373166 TRBV10-3A0A0K0K1G6 114 aa11.24□□□□□ -0.61
TRAPPC3-204ENST00000373166 C20orf202A1L168 122 aa11.24□□□□□ -0.61
TRAPPC3-204ENST00000373166 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
TRAPPC3-204ENST00000373166 KCNQ1DNQ9H478 68 aa11.24□□□□□ -0.61
TRAPPC3-204ENST00000373166 SPANXB1Q9NS25 103 aaPredicted RBP11.24□□□□□ -0.61
TRAPPC3-204ENST00000373166 TRBV10-2A0A0K0K1G8 114 aa11.23□□□□□ -0.61
TRAPPC3-204ENST00000373166 TYMSOSQ8TAI1 123 aa11.23□□□□□ -0.61
TRAPPC3-204ENST00000373166 ANAPC11Q9NYG5 84 aa11.23□□□□□ -0.61
TRAPPC3-204ENST00000373166 ETDCA0A1B0GVM5 59 aa11.22□□□□□ -0.61
TRAPPC3-204ENST00000373166 LINC00337Q8N6G1 96 aa11.22□□□□□ -0.61
TRAPPC3-204ENST00000373166 NDUFC2O95298 119 aa11.21□□□□□ -0.61
TRAPPC3-204ENST00000373166 DDTP30046 118 aa11.21□□□□□ -0.61
TRAPPC3-204ENST00000373166 SPRR1AP35321 89 aa11.21□□□□□ -0.61
TRAPPC3-204ENST00000373166 ZNF815PA8K554 130 aa11.2□□□□□ -0.62
TRAPPC3-204ENST00000373166 NPC2P61916 151 aa11.2□□□□□ -0.62
TRAPPC3-204ENST00000373166 S100A7L2Q5SY68 101 aa11.19□□□□□ -0.62
TRAPPC3-204ENST00000373166 ADAMTSL4-AS1Q5T5F5 129 aa11.19□□□□□ -0.62
TRAPPC3-204ENST00000373166 TIMM17BO60830 172 aa11.18□□□□□ -0.62
TRAPPC3-204ENST00000373166 SOSTDC1Q6X4U4 206 aa11.18□□□□□ -0.62
TRAPPC3-204ENST00000373166 ZNF706Q9Y5V0 76 aaPredicted RBP11.18□□□□□ -0.62
TRAPPC3-204ENST00000373166 MUC17Q685J3 4493 aa11.17□□□□□ -0.62
TRAPPC3-204ENST00000373166 KRTAP13-2Q52LG2 175 aa11.17□□□□□ -0.62
TRAPPC3-204ENST00000373166 KRTAP4-16G5E9R7 235 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC3-204ENST00000373166 AKR1D1P51857 326 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms