RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 LINC00482Q8N8I6 264 aa12.25□□□□□ -0.45
HNF4A-203ENST00000372920 ACANP16112 2415 aa12.25□□□□□ -0.45
HNF4A-203ENST00000372920 ANK3Q12955 4377 aaKnown RBP12.24□□□□□ -0.45
HNF4A-203ENST00000372920 LOC110117498A0A087WWA1 95 aa12.24□□□□□ -0.45
HNF4A-203ENST00000372920 M0R2N4 97 aa12.24□□□□□ -0.45
HNF4A-203ENST00000372920 KRTAP10-3P60369 221 aa12.24□□□□□ -0.45
HNF4A-203ENST00000372920 OXTP01178 125 aa12.23□□□□□ -0.45
HNF4A-203ENST00000372920 IGLV6-57P01721 117 aa12.23□□□□□ -0.45
HNF4A-203ENST00000372920 CYSRT1A8MQ03 144 aa12.22□□□□□ -0.45
HNF4A-203ENST00000372920 DEFB135Q30KP9 77 aa12.22□□□□□ -0.45
HNF4A-203ENST00000372920 SPATA3Q8NHX4 192 aa12.22□□□□□ -0.45
HNF4A-203ENST00000372920 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
HNF4A-203ENST00000372920 IGHV4-30-4P0DP06 118 aa12.21□□□□□ -0.45
HNF4A-203ENST00000372920 Q6ZQY7 126 aa12.21□□□□□ -0.46
HNF4A-203ENST00000372920 DAD1P61803 113 aa12.2□□□□□ -0.46
HNF4A-203ENST00000372920 MUC7Q8TAX7 377 aa12.2□□□□□ -0.46
HNF4A-203ENST00000372920 LINC01547P58512 204 aaPredicted RBP12.19□□□□□ -0.46
HNF4A-203ENST00000372920 C20orf197Q8N268 126 aa12.19□□□□□ -0.46
HNF4A-203ENST00000372920 Q6ZVQ6 151 aa12.18□□□□□ -0.46
HNF4A-203ENST00000372920 HAMPP81172 84 aa12.17□□□□□ -0.46
HNF4A-203ENST00000372920 CELA1Q9UNI1 258 aa12.17□□□□□ -0.46
HNF4A-203ENST00000372920 C5orf47Q569G3 176 aa12.17□□□□□ -0.46
HNF4A-203ENST00000372920 KLK12Q9UKR0 248 aa12.16□□□□□ -0.46
HNF4A-203ENST00000372920 NDUFC2-KCTD14E9PQ53 114 aa12.16□□□□□ -0.46
HNF4A-203ENST00000372920 LELP1Q5T871 98 aa12.15□□□□□ -0.46
HNF4A-203ENST00000372920 XAGE1AQ9HD64 81 aa12.15□□□□□ -0.46
HNF4A-203ENST00000372920 HTN3P15516 51 aa12.14□□□□□ -0.47
HNF4A-203ENST00000372920 C9orf66Q5T8R8 295 aa12.14□□□□□ -0.47
HNF4A-203ENST00000372920 PRR34Q9NV39 138 aa12.14□□□□□ -0.47
HNF4A-203ENST00000372920 PDZD2O15018 2839 aa12.14□□□□□ -0.47
HNF4A-203ENST00000372920 DIRC1Q969H9 104 aa12.13□□□□□ -0.47
HNF4A-203ENST00000372920 C6orf48Q9UBA6 75 aa12.13□□□□□ -0.47
HNF4A-203ENST00000372920 PDE6GP18545 87 aa12.13□□□□□ -0.47
HNF4A-203ENST00000372920 TRAV7A0A075B6U4 112 aa12.12□□□□□ -0.47
HNF4A-203ENST00000372920 GVQW2A0A096LPI5 108 aaPredicted RBP12.12□□□□□ -0.47
HNF4A-203ENST00000372920 TRAV10A0A0B4J240 114 aa12.11□□□□□ -0.47
HNF4A-203ENST00000372920 H3BQ85 93 aa12.11□□□□□ -0.47
HNF4A-203ENST00000372920 BCE1O60756 84 aa12.11□□□□□ -0.47
HNF4A-203ENST00000372920 VWFP04275 2813 aa12.11□□□□□ -0.47
HNF4A-203ENST00000372920 Q8NAQ8 132 aa12.11□□□□□ -0.47
HNF4A-203ENST00000372920 APOC4P55056 127 aa12.1□□□□□ -0.47
HNF4A-203ENST00000372920 ZNF73O43830 326 aaPredicted RBP12.1□□□□□ -0.47
HNF4A-203ENST00000372920 CXCL6P80162 114 aa12.09□□□□□ -0.47
HNF4A-203ENST00000372920 COX7BP24311 80 aa12.08□□□□□ -0.48
HNF4A-203ENST00000372920 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.08□□□□□ -0.48
HNF4A-203ENST00000372920 TRBV7-4A0A0J9YYF1 115 aa12.08□□□□□ -0.48
HNF4A-203ENST00000372920 FAM236DA0A1B0GTK5 79 aa12.08□□□□□ -0.48
HNF4A-203ENST00000372920 FAM236CP0DP71 79 aa12.08□□□□□ -0.48
HNF4A-203ENST00000372920 Q5XG85 94 aa12.08□□□□□ -0.48
HNF4A-203ENST00000372920 H7BZZ5 65 aa12.07□□□□□ -0.48
HNF4A-203ENST00000372920 C4orf26Q17RF5 130 aa12.07□□□□□ -0.48
HNF4A-203ENST00000372920 SPART-AS1P0CW21 52 aa12.07□□□□□ -0.48
HNF4A-203ENST00000372920 SMR3AQ99954 134 aa12.07□□□□□ -0.48
HNF4A-203ENST00000372920 MIFP14174 115 aa12.06□□□□□ -0.48
HNF4A-203ENST00000372920 ELOF1P60002 83 aaKnown RBP12.06□□□□□ -0.48
HNF4A-203ENST00000372920 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
HNF4A-203ENST00000372920 SCXQ7RTU7 201 aa12.05□□□□□ -0.48
HNF4A-203ENST00000372920 KLKP1Q107X0 134 aa12.03□□□□□ -0.48
HNF4A-203ENST00000372920 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
HNF4A-203ENST00000372920 VPREB1P12018 145 aa12.03□□□□□ -0.48
HNF4A-203ENST00000372920 SNURFQ9Y675 71 aa12.03□□□□□ -0.48
HNF4A-203ENST00000372920 ITPR2Q14571 2701 aa12.02□□□□□ -0.49
HNF4A-203ENST00000372920 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
HNF4A-203ENST00000372920 RMI2Q96E14 147 aa12.01□□□□□ -0.49
HNF4A-203ENST00000372920 CAMK2N2Q96S95 79 aa12.01□□□□□ -0.49
HNF4A-203ENST00000372920 HIVEP2P31629 2446 aa12.01□□□□□ -0.49
HNF4A-203ENST00000372920 HRCT1Q6UXD1 115 aa12□□□□□ -0.49
HNF4A-203ENST00000372920 TM2D3Q9BRN9 247 aa11.99□□□□□ -0.49
HNF4A-203ENST00000372920 M0R378 163 aa11.98□□□□□ -0.49
HNF4A-203ENST00000372920 SERP1Q9Y6X1 66 aa11.98□□□□□ -0.49
HNF4A-203ENST00000372920 EPM2AB3EWF7 344 aa11.97□□□□□ -0.49
HNF4A-203ENST00000372920 Q6ZRU5 148 aa11.97□□□□□ -0.49
HNF4A-203ENST00000372920 WFDC10BQ8IUB3 73 aa11.97□□□□□ -0.49
HNF4A-203ENST00000372920 EGFEM1PQ0D2K5 195 aa11.96□□□□□ -0.49
HNF4A-203ENST00000372920 LINC00528Q8N1L1 170 aa11.96□□□□□ -0.49
HNF4A-203ENST00000372920 F8WEM9 126 aa11.95□□□□□ -0.5
HNF4A-203ENST00000372920 KRTAP26-1Q6PEX3 210 aa11.95□□□□□ -0.5
HNF4A-203ENST00000372920 C15orf56Q8N910 161 aa11.93□□□□□ -0.5
HNF4A-203ENST00000372920 Q8N9L7 120 aa11.91□□□□□ -0.5
HNF4A-203ENST00000372920 NREPQ16612 68 aa11.91□□□□□ -0.5
HNF4A-203ENST00000372920 BPY2O14599 106 aa11.91□□□□□ -0.5
HNF4A-203ENST00000372920 WIPF1O43516 503 aa11.91□□□□□ -0.5
HNF4A-203ENST00000372920 HIVEP1P15822 2718 aa11.9□□□□□ -0.5
HNF4A-203ENST00000372920 TENM1Q9UKZ4 2725 aa11.9□□□□□ -0.5
HNF4A-203ENST00000372920 Q6ZRP5 223 aa11.89□□□□□ -0.51
HNF4A-203ENST00000372920 KPRPQ5T749 579 aaPredicted RBP11.89□□□□□ -0.51
HNF4A-203ENST00000372920 UNC79Q9P2D8 2635 aa11.88□□□□□ -0.51
HNF4A-203ENST00000372920 NDUFC1O43677 76 aa11.87□□□□□ -0.51
HNF4A-203ENST00000372920 IGKV4-1P06312 121 aa11.87□□□□□ -0.51
HNF4A-203ENST00000372920 TMEM254Q8TBM7 123 aa11.85□□□□□ -0.51
HNF4A-203ENST00000372920 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
HNF4A-203ENST00000372920 C3orf84H3BNL1 204 aa11.84□□□□□ -0.51
HNF4A-203ENST00000372920 DEFB105AQ8NG35 78 aa11.83□□□□□ -0.52
HNF4A-203ENST00000372920 H3BNG1 76 aa11.83□□□□□ -0.52
HNF4A-203ENST00000372920 C1orf43Q9BWL3 253 aa11.83□□□□□ -0.52
HNF4A-203ENST00000372920 RETNQ9HD89 108 aa11.83□□□□□ -0.52
HNF4A-203ENST00000372920 NOTCH2Q04721 2471 aa11.82□□□□□ -0.52
HNF4A-203ENST00000372920 TRRAPQ9Y4A5 3859 aa11.81□□□□□ -0.52
HNF4A-203ENST00000372920 ESRGQ1W209 222 aa11.81□□□□□ -0.52
HNF4A-203ENST00000372920 INAFM1C9JVW0 142 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms