RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 TRGV2A0A075B6R0 118 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 IGHV4-28A0A0C4DH34 117 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 A0A0J9YWU9 116 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 USP17L23D6RBM5 183 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 TMEM256-PLSCR3K7ERE1 68 aa7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 C9orf129Q5T035 196 aaKnown RBP7.89□□□□□ -1.15
TSPAN1-201ENST00000372003 TRGV4A0A0C4DH28 118 aa7.88□□□□□ -1.15
TSPAN1-201ENST00000372003 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
TSPAN1-201ENST00000372003 MIFP14174 115 aa7.88□□□□□ -1.15
TSPAN1-201ENST00000372003 COX17Q14061 63 aa7.88□□□□□ -1.15
TSPAN1-201ENST00000372003 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
TSPAN1-201ENST00000372003 IGLV4-60A0A075B6I1 120 aa7.87□□□□□ -1.15
TSPAN1-201ENST00000372003 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
TSPAN1-201ENST00000372003 A0A1B0GUV1 79 aa7.87□□□□□ -1.15
TSPAN1-201ENST00000372003 FAM19A5Q7Z5A7 132 aaPredicted RBP7.87□□□□□ -1.15
TSPAN1-201ENST00000372003 Q8NAQ8 132 aa7.87□□□□□ -1.15
TSPAN1-201ENST00000372003 SMIM9A6NGZ8 99 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 NCR3O14931 201 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 SS18Q15532 418 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 C6orf226Q5I0X4 101 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 Q8N814 137 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 MUC7Q8TAX7 377 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 DPH3Q96FX2 82 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 COL7A1Q02388 2944 aa7.86□□□□□ -1.15
TSPAN1-201ENST00000372003 H3BQ85 93 aa7.85□□□□□ -1.15
TSPAN1-201ENST00000372003 PFN2P35080 140 aa7.85□□□□□ -1.15
TSPAN1-201ENST00000372003 FHL2Q14192 279 aa7.85□□□□□ -1.15
TSPAN1-201ENST00000372003 LOC107984640A0A0U1RRK4 108 aa7.85□□□□□ -1.15
TSPAN1-201ENST00000372003 HUWE1Q7Z6Z7 4374 aaKnown RBP7.84□□□□□ -1.15
TSPAN1-201ENST00000372003 TGP01266 2768 aa7.84□□□□□ -1.15
TSPAN1-201ENST00000372003 LOC100131303A0A0U1RQF7 123 aa7.84□□□□□ -1.15
TSPAN1-201ENST00000372003 TENM3Q9P273 2699 aa7.83□□□□□ -1.16
TSPAN1-201ENST00000372003 C11orf68Q9H3H3 251 aaKnown RBP7.83□□□□□ -1.16
TSPAN1-201ENST00000372003 LINC00612Q8N6U2 182 aa7.82□□□□□ -1.16
TSPAN1-201ENST00000372003 C11orf45Q8TAV5 145 aa7.82□□□□□ -1.16
TSPAN1-201ENST00000372003 UBL5Q9BZL1 73 aa7.82□□□□□ -1.16
TSPAN1-201ENST00000372003 CELA1Q9UNI1 258 aa7.82□□□□□ -1.16
TSPAN1-201ENST00000372003 IGKV3OR2-268A0A0C4DH90 116 aa7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 NANOS2P60321 138 aaKnown RBP7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 WWC2-AS2Q96NR7 200 aa7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 A0A087WVE0 104 aa7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 SLPIP03973 132 aa7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 SPART-AS1P0CW21 52 aa7.81□□□□□ -1.16
TSPAN1-201ENST00000372003 LOC110117498A0A087WWA1 95 aa7.8□□□□□ -1.16
TSPAN1-201ENST00000372003 F8WDY8 70 aa7.8□□□□□ -1.16
TSPAN1-201ENST00000372003 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
TSPAN1-201ENST00000372003 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
TSPAN1-201ENST00000372003 PDE6GP18545 87 aa7.8□□□□□ -1.16
TSPAN1-201ENST00000372003 GHRHP01286 108 aa7.79□□□□□ -1.16
TSPAN1-201ENST00000372003 CYSTM1Q9H1C7 97 aa7.79□□□□□ -1.16
TSPAN1-201ENST00000372003 CD164L2Q6UWJ8 174 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 LYRM9A8MSI8 78 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 ZNF561-AS1K7EIQ3 104 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 DAD1P61803 113 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 KIAA0087Q14695 138 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 LINC00575Q6W349 94 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 Q6ZTC4 211 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 C6orf223Q8N319 242 aa7.78□□□□□ -1.16
TSPAN1-201ENST00000372003 STAB2Q8WWQ8 2551 aa7.76□□□□□ -1.17
TSPAN1-201ENST00000372003 HTN3P15516 51 aa7.76□□□□□ -1.17
TSPAN1-201ENST00000372003 XCL1P47992 114 aa7.76□□□□□ -1.17
TSPAN1-201ENST00000372003 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
TSPAN1-201ENST00000372003 Q6ZQT0 140 aa7.76□□□□□ -1.17
TSPAN1-201ENST00000372003 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
TSPAN1-201ENST00000372003 GYPEP15421 78 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 ENHOQ6UWT2 76 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 PRO0255Q9UI72 69 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 DEFB131BA0A096LNP1 70 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 CXCL6P80162 114 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 C6orf99Q4VX62 202 aa7.74□□□□□ -1.17
TSPAN1-201ENST00000372003 TRAV23DV6A0A075B6W5 121 aa7.73□□□□□ -1.17
TSPAN1-201ENST00000372003 TRAV10A0A0B4J240 114 aa7.73□□□□□ -1.17
TSPAN1-201ENST00000372003 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
TSPAN1-201ENST00000372003 DSCR8Q96T75 97 aa7.73□□□□□ -1.17
TSPAN1-201ENST00000372003 FAM19A1Q7Z5A9 133 aa7.72□□□□□ -1.17
TSPAN1-201ENST00000372003 FAM236DA0A1B0GTK5 79 aa7.71□□□□□ -1.17
TSPAN1-201ENST00000372003 C3orf84H3BNL1 204 aa7.71□□□□□ -1.17
TSPAN1-201ENST00000372003 FAM236CP0DP71 79 aa7.71□□□□□ -1.17
TSPAN1-201ENST00000372003 KLKP1Q107X0 134 aa7.71□□□□□ -1.17
TSPAN1-201ENST00000372003 NUPR2A6NF83 97 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 OXTP01178 125 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 CASC10Q5T4H9 136 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 Q5XG85 94 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 CHCHD10Q8WYQ3 142 aaPredicted RBP7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 SERP1Q9Y6X1 66 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 IGLV6-57P01721 117 aa7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 LINC01547P58512 204 aaPredicted RBP7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 PRR3P79522 188 aaKnown RBP7.7□□□□□ -1.18
TSPAN1-201ENST00000372003 GVQW2A0A096LPI5 108 aaPredicted RBP7.69□□□□□ -1.18
TSPAN1-201ENST00000372003 NDUFC1O43677 76 aa7.69□□□□□ -1.18
TSPAN1-201ENST00000372003 C20orf197Q8N268 126 aa7.69□□□□□ -1.18
TSPAN1-201ENST00000372003 TRBV7-6A0A0J9YX20 115 aa7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 REG3AQ06141 175 aa7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 Q6ZVQ6 151 aa7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 LINC00269Q8N2A0 174 aa7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 LAMTOR3Q9UHA4 124 aa7.68□□□□□ -1.18
TSPAN1-201ENST00000372003 H7BZZ5 65 aa7.67□□□□□ -1.18
TSPAN1-201ENST00000372003 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms