RNA–Protein interactions for RNA: ENST00000371725.7

SDCCAG3-204, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SDCCAG3, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-204ENST00000371725 LINC00167Q96N53 147 aa19.24■□□□□ 0.67
SDCCAG3-204ENST00000371725 NDUFC2O95298 119 aa19.23■□□□□ 0.67
SDCCAG3-204ENST00000371725 KIAA0087Q14695 138 aa19.23■□□□□ 0.67
SDCCAG3-204ENST00000371725 CD164L2Q6UWJ8 174 aa19.23■□□□□ 0.67
SDCCAG3-204ENST00000371725 DNAH9Q9NYC9 4486 aa19.23■□□□□ 0.67
SDCCAG3-204ENST00000371725 ORMDL1Q9P0S3 153 aa19.22■□□□□ 0.67
SDCCAG3-204ENST00000371725 DEFB131BA0A096LNP1 70 aa19.2■□□□□ 0.66
SDCCAG3-204ENST00000371725 CLPSL2Q6UWE3 100 aa19.19■□□□□ 0.66
SDCCAG3-204ENST00000371725 TMEM126AQ9H061 195 aa19.19■□□□□ 0.66
SDCCAG3-204ENST00000371725 SLPIP03973 132 aa19.18■□□□□ 0.66
SDCCAG3-204ENST00000371725 HIST1H4AP62805 103 aaKnown RBP19.18■□□□□ 0.66
SDCCAG3-204ENST00000371725 LINC00269Q8N2A0 174 aa19.17■□□□□ 0.66
SDCCAG3-204ENST00000371725 C3orf22Q8N5N4 141 aa19.17■□□□□ 0.66
SDCCAG3-204ENST00000371725 STAB2Q8WWQ8 2551 aa19.17■□□□□ 0.66
SDCCAG3-204ENST00000371725 NCR3O14931 201 aa19.16■□□□□ 0.66
SDCCAG3-204ENST00000371725 SVIPQ8NHG7 77 aa19.16■□□□□ 0.66
SDCCAG3-204ENST00000371725 Q6JHZ5 121 aa19.16■□□□□ 0.66
SDCCAG3-204ENST00000371725 CFAP161Q6P656 301 aa19.15■□□□□ 0.66
SDCCAG3-204ENST00000371725 CHCHD10Q8WYQ3 142 aaPredicted RBP19.15■□□□□ 0.66
SDCCAG3-204ENST00000371725 LINC00846Q9NV44 126 aa19.15■□□□□ 0.66
SDCCAG3-204ENST00000371725 UQCRQO14949 82 aa19.15■□□□□ 0.66
SDCCAG3-204ENST00000371725 LYPD5Q6UWN5 251 aa19.15■□□□□ 0.66
SDCCAG3-204ENST00000371725 Q8N814 137 aa19.13■□□□□ 0.65
SDCCAG3-204ENST00000371725 PRR3P79522 188 aaKnown RBP19.12■□□□□ 0.65
SDCCAG3-204ENST00000371725 REG3AQ06141 175 aa19.11■□□□□ 0.65
SDCCAG3-204ENST00000371725 LELP1Q5T871 98 aa19.11■□□□□ 0.65
SDCCAG3-204ENST00000371725 LINC00526Q96FQ7 95 aa19.11■□□□□ 0.65
SDCCAG3-204ENST00000371725 MEGF8Q7Z7M0 2845 aa19.1■□□□□ 0.65
SDCCAG3-204ENST00000371725 H3BNG1 76 aa19.1■□□□□ 0.65
SDCCAG3-204ENST00000371725 CCKP06307 115 aa19.1■□□□□ 0.65
SDCCAG3-204ENST00000371725 JMJD7-PLA2G4BH0Y9G9 81 aa19.09■□□□□ 0.65
SDCCAG3-204ENST00000371725 ANGP03950 147 aaKnown RBP19.09■□□□□ 0.65
SDCCAG3-204ENST00000371725 TMEM256-PLSCR3K7ERE1 68 aa19.08■□□□□ 0.64
SDCCAG3-204ENST00000371725 B9D2Q9BPU9 175 aa19.08■□□□□ 0.64
SDCCAG3-204ENST00000371725 ATOX1O00244 68 aa19.07■□□□□ 0.64
SDCCAG3-204ENST00000371725 C9orf153Q5TBE3 101 aa19.06■□□□□ 0.64
SDCCAG3-204ENST00000371725 COX7CP15954 63 aa19.06■□□□□ 0.64
SDCCAG3-204ENST00000371725 MUC7Q8TAX7 377 aa19.06■□□□□ 0.64
SDCCAG3-204ENST00000371725 PRKDCP78527 4128 aaKnown RBP19.05■□□□□ 0.64
SDCCAG3-204ENST00000371725 ESRGQ1W209 222 aa19.05■□□□□ 0.64
SDCCAG3-204ENST00000371725 TRAV10A0A0B4J240 114 aa19.04■□□□□ 0.64
SDCCAG3-204ENST00000371725 C2orf48Q96LS8 159 aa19.04■□□□□ 0.64
SDCCAG3-204ENST00000371725 IGLV10-54A0A075B6I4 117 aa19.04■□□□□ 0.64
SDCCAG3-204ENST00000371725 WFDC10BQ8IUB3 73 aa19.03■□□□□ 0.64
SDCCAG3-204ENST00000371725 IGKV3D-7A0A0C4DH55 119 aa19.02■□□□□ 0.64
SDCCAG3-204ENST00000371725 C9orf116Q5BN46 136 aaPredicted RBP19.02■□□□□ 0.64
SDCCAG3-204ENST00000371725 RPL18AQ02543 176 aaKnown RBP19.01■□□□□ 0.63
SDCCAG3-204ENST00000371725 SMIM20Q8N5G0 67 aa19■□□□□ 0.63
SDCCAG3-204ENST00000371725 Q8NDZ9 215 aa18.99■□□□□ 0.63
SDCCAG3-204ENST00000371725 S100A7L2Q5SY68 101 aa18.98■□□□□ 0.63
SDCCAG3-204ENST00000371725 C6orf99Q4VX62 202 aa18.97■□□□□ 0.63
SDCCAG3-204ENST00000371725 KLK12Q9UKR0 248 aa18.97■□□□□ 0.63
SDCCAG3-204ENST00000371725 CRYGAP11844 174 aa18.96■□□□□ 0.63
SDCCAG3-204ENST00000371725 LINC00575Q6W349 94 aa18.96■□□□□ 0.63
SDCCAG3-204ENST00000371725 SPAG11BQ08648 103 aa18.93■□□□□ 0.62
SDCCAG3-204ENST00000371725 C10orf25Q5T742 122 aa18.93■□□□□ 0.62
SDCCAG3-204ENST00000371725 UNQ6190/PRO20217Q6UXQ8 127 aa18.93■□□□□ 0.62
SDCCAG3-204ENST00000371725 PRR34Q9NV39 138 aa18.93■□□□□ 0.62
SDCCAG3-204ENST00000371725 ATP5EP2Q5VTU8 51 aa18.92■□□□□ 0.62
SDCCAG3-204ENST00000371725 C6orf223Q8N319 242 aa18.9■□□□□ 0.62
SDCCAG3-204ENST00000371725 KRTAP21-3Q3LHN1 58 aa18.89■□□□□ 0.62
SDCCAG3-204ENST00000371725 IGLV6-57P01721 117 aa18.89■□□□□ 0.61
SDCCAG3-204ENST00000371725 ENHOQ6UWT2 76 aa18.89■□□□□ 0.61
SDCCAG3-204ENST00000371725 CSMD3Q7Z407 3707 aa18.89■□□□□ 0.61
SDCCAG3-204ENST00000371725 GVQW2A0A096LPI5 108 aaPredicted RBP18.88■□□□□ 0.61
SDCCAG3-204ENST00000371725 A0A087WVE0 104 aa18.87■□□□□ 0.61
SDCCAG3-204ENST00000371725 SERP2Q8N6R1 65 aa18.87■□□□□ 0.61
SDCCAG3-204ENST00000371725 hADV29S1A0JD25 119 aa18.86■□□□□ 0.61
SDCCAG3-204ENST00000371725 LYSTQ99698 3801 aa18.86■□□□□ 0.61
SDCCAG3-204ENST00000371725 USP17L23D6RBM5 183 aa18.85■□□□□ 0.61
SDCCAG3-204ENST00000371725 LINC00588Q9Y4M8 146 aa18.85■□□□□ 0.61
SDCCAG3-204ENST00000371725 ZNF561-AS1K7EIQ3 104 aa18.83■□□□□ 0.6
SDCCAG3-204ENST00000371725 LOC110117498A0A087WWA1 95 aa18.82■□□□□ 0.6
SDCCAG3-204ENST00000371725 TRBV10-3A0A0K0K1G6 114 aa18.82■□□□□ 0.6
SDCCAG3-204ENST00000371725 H3BQ85 93 aa18.81■□□□□ 0.6
SDCCAG3-204ENST00000371725 RBM3P98179 157 aaKnown RBP18.81■□□□□ 0.6
SDCCAG3-204ENST00000371725 Q6ZQT0 140 aa18.8■□□□□ 0.6
SDCCAG3-204ENST00000371725 UBL5Q9BZL1 73 aa18.79■□□□□ 0.6
SDCCAG3-204ENST00000371725 UPK3BQ9BT76 320 aa18.78■□□□□ 0.6
SDCCAG3-204ENST00000371725 TENM2Q9NT68 2774 aa18.77■□□□□ 0.6
SDCCAG3-204ENST00000371725 LINC01556Q5JQF7 62 aa18.76■□□□□ 0.59
SDCCAG3-204ENST00000371725 C6orf48Q9UBA6 75 aa18.75■□□□□ 0.59
SDCCAG3-204ENST00000371725 DYNC2H1Q8NCM8 4307 aaKnown RBP18.74■□□□□ 0.59
SDCCAG3-204ENST00000371725 LAMTOR3Q9UHA4 124 aa18.72■□□□□ 0.59
SDCCAG3-204ENST00000371725 FBN3Q75N90 2809 aa18.72■□□□□ 0.59
SDCCAG3-204ENST00000371725 DNAH10OSP0CZ25 163 aa18.71■□□□□ 0.59
SDCCAG3-204ENST00000371725 PDE6GP18545 87 aa18.71■□□□□ 0.59
SDCCAG3-204ENST00000371725 TRAV23DV6A0A075B6W5 121 aa18.7■□□□□ 0.58
SDCCAG3-204ENST00000371725 DNAH7Q8WXX0 4024 aa18.69■□□□□ 0.58
SDCCAG3-204ENST00000371725 Q6ZQY7 126 aa18.69■□□□□ 0.58
SDCCAG3-204ENST00000371725 FAM19A1Q7Z5A9 133 aa18.69■□□□□ 0.58
SDCCAG3-204ENST00000371725 DIRC1Q969H9 104 aa18.68■□□□□ 0.58
SDCCAG3-204ENST00000371725 CYSTM1Q9H1C7 97 aa18.68■□□□□ 0.58
SDCCAG3-204ENST00000371725 APLNQ9ULZ1 77 aa18.68■□□□□ 0.58
SDCCAG3-204ENST00000371725 KRTAP26-1Q6PEX3 210 aa18.68■□□□□ 0.58
SDCCAG3-204ENST00000371725 PLECQ15149 4684 aaKnown RBP18.68■□□□□ 0.58
SDCCAG3-204ENST00000371725 RPS28P62857 69 aaKnown RBP18.67■□□□□ 0.58
SDCCAG3-204ENST00000371725 TRBV7-6A0A0J9YX20 115 aa18.66■□□□□ 0.58
SDCCAG3-204ENST00000371725 DSCR8Q96T75 97 aa18.66■□□□□ 0.58
SDCCAG3-204ENST00000371725 TMEM258P61165 79 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms