RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 C15orf53Q8NAA6 179 aa8.02□□□□□ -1.13
PDE6C-201ENST00000371447 CYSRT1A8MQ03 144 aa8.02□□□□□ -1.13
PDE6C-201ENST00000371447 ANK2Q01484 3957 aa8.01□□□□□ -1.13
PDE6C-201ENST00000371447 LYPD5Q6UWN5 251 aa8.01□□□□□ -1.13
PDE6C-201ENST00000371447 STAB2Q8WWQ8 2551 aa8□□□□□ -1.13
PDE6C-201ENST00000371447 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
PDE6C-201ENST00000371447 FAM236CP0DP71 79 aa8□□□□□ -1.13
PDE6C-201ENST00000371447 GAGE2AQ6NT46 116 aa7.99□□□□□ -1.13
PDE6C-201ENST00000371447 Q8IZM0 81 aa7.99□□□□□ -1.13
PDE6C-201ENST00000371447 S100A7L2Q5SY68 101 aa7.99□□□□□ -1.13
PDE6C-201ENST00000371447 LELP1Q5T871 98 aa7.99□□□□□ -1.13
PDE6C-201ENST00000371447 H3BT86 120 aa7.98□□□□□ -1.13
PDE6C-201ENST00000371447 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
PDE6C-201ENST00000371447 ENHOQ6UWT2 76 aa7.98□□□□□ -1.13
PDE6C-201ENST00000371447 RPL18AQ02543 176 aaKnown RBP7.98□□□□□ -1.13
PDE6C-201ENST00000371447 KIAA0087Q14695 138 aa7.98□□□□□ -1.13
PDE6C-201ENST00000371447 TENM2Q9NT68 2774 aa7.98□□□□□ -1.13
PDE6C-201ENST00000371447 Q8NDZ9 215 aa7.97□□□□□ -1.13
PDE6C-201ENST00000371447 C14orf132Q9NPU4 83 aa7.97□□□□□ -1.13
PDE6C-201ENST00000371447 IGKV2D-24A0A075B6R9 120 aa7.96□□□□□ -1.13
PDE6C-201ENST00000371447 DEFB131BA0A096LNP1 70 aa7.96□□□□□ -1.13
PDE6C-201ENST00000371447 C11orf45Q8TAV5 145 aa7.96□□□□□ -1.14
PDE6C-201ENST00000371447 RPL28P46779 137 aaKnown RBP7.95□□□□□ -1.14
PDE6C-201ENST00000371447 ESRGQ1W209 222 aa7.95□□□□□ -1.14
PDE6C-201ENST00000371447 DSCR8Q96T75 97 aa7.95□□□□□ -1.14
PDE6C-201ENST00000371447 ZNF561-AS1K7EIQ3 104 aa7.95□□□□□ -1.14
PDE6C-201ENST00000371447 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
PDE6C-201ENST00000371447 CAMK2N2Q96S95 79 aa7.93□□□□□ -1.14
PDE6C-201ENST00000371447 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
PDE6C-201ENST00000371447 TRACP01848 142 aa7.92□□□□□ -1.14
PDE6C-201ENST00000371447 PRO0628Q9UI54 55 aa7.92□□□□□ -1.14
PDE6C-201ENST00000371447 LINC00336Q6ZUF6 198 aa7.91□□□□□ -1.14
PDE6C-201ENST00000371447 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
PDE6C-201ENST00000371447 C6orf48Q9UBA6 75 aa7.9□□□□□ -1.14
PDE6C-201ENST00000371447 C2orf48Q96LS8 159 aa7.9□□□□□ -1.15
PDE6C-201ENST00000371447 C3orf22Q8N5N4 141 aa7.89□□□□□ -1.15
PDE6C-201ENST00000371447 C22orf24Q9Y442 160 aa7.89□□□□□ -1.15
PDE6C-201ENST00000371447 H0YGX0 51 aa7.88□□□□□ -1.15
PDE6C-201ENST00000371447 CSMD3Q7Z407 3707 aa7.88□□□□□ -1.15
PDE6C-201ENST00000371447 BRK1Q8WUW1 75 aa7.88□□□□□ -1.15
PDE6C-201ENST00000371447 CXCL5P42830 114 aa7.88□□□□□ -1.15
PDE6C-201ENST00000371447 Q6ZRU5 148 aa7.87□□□□□ -1.15
PDE6C-201ENST00000371447 SMCR5Q8TEV8 140 aa7.87□□□□□ -1.15
PDE6C-201ENST00000371447 PRR34Q9NV39 138 aa7.87□□□□□ -1.15
PDE6C-201ENST00000371447 ORMDL1Q9P0S3 153 aa7.87□□□□□ -1.15
PDE6C-201ENST00000371447 IGKV3D-7A0A0C4DH55 119 aa7.86□□□□□ -1.15
PDE6C-201ENST00000371447 TRBV10-3A0A0K0K1G6 114 aa7.86□□□□□ -1.15
PDE6C-201ENST00000371447 A0A1B0GX51 115 aa7.86□□□□□ -1.15
PDE6C-201ENST00000371447 UQCRQO14949 82 aa7.85□□□□□ -1.15
PDE6C-201ENST00000371447 LAMTOR3Q9UHA4 124 aa7.85□□□□□ -1.15
PDE6C-201ENST00000371447 CASC10Q5T4H9 136 aa7.84□□□□□ -1.15
PDE6C-201ENST00000371447 COX17Q14061 63 aa7.84□□□□□ -1.15
PDE6C-201ENST00000371447 Q8N814 137 aa7.84□□□□□ -1.15
PDE6C-201ENST00000371447 SDIM1Q6ZPB5 146 aa7.83□□□□□ -1.16
PDE6C-201ENST00000371447 Q6Q795 121 aa7.83□□□□□ -1.16
PDE6C-201ENST00000371447 INAFM2P0DMQ5 153 aa7.83□□□□□ -1.16
PDE6C-201ENST00000371447 EGFEM1PQ0D2K5 195 aa7.83□□□□□ -1.16
PDE6C-201ENST00000371447 DPH3Q96FX2 82 aa7.82□□□□□ -1.16
PDE6C-201ENST00000371447 Q6ZQY7 126 aa7.82□□□□□ -1.16
PDE6C-201ENST00000371447 K7EIL1 84 aa7.81□□□□□ -1.16
PDE6C-201ENST00000371447 C15orf56Q8N910 161 aa7.81□□□□□ -1.16
PDE6C-201ENST00000371447 LINC00846Q9NV44 126 aa7.81□□□□□ -1.16
PDE6C-201ENST00000371447 COL7A1Q02388 2944 aa7.81□□□□□ -1.16
PDE6C-201ENST00000371447 RPS28P62857 69 aaKnown RBP7.8□□□□□ -1.16
PDE6C-201ENST00000371447 RPL37AP8A6NKH3 93 aa7.8□□□□□ -1.16
PDE6C-201ENST00000371447 LINC01561Q8N1V8 128 aa7.8□□□□□ -1.16
PDE6C-201ENST00000371447 DEFB105AQ8NG35 78 aa7.8□□□□□ -1.16
PDE6C-201ENST00000371447 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
PDE6C-201ENST00000371447 Q5XG85 94 aa7.79□□□□□ -1.16
PDE6C-201ENST00000371447 Q6ZRP5 223 aa7.79□□□□□ -1.16
PDE6C-201ENST00000371447 NDUFC2O95298 119 aa7.79□□□□□ -1.16
PDE6C-201ENST00000371447 OXTP01178 125 aa7.79□□□□□ -1.16
PDE6C-201ENST00000371447 TRAV23DV6A0A075B6W5 121 aa7.78□□□□□ -1.16
PDE6C-201ENST00000371447 A0A087WVE0 104 aa7.78□□□□□ -1.16
PDE6C-201ENST00000371447 HIST1H4AP62805 103 aaKnown RBP7.78□□□□□ -1.16
PDE6C-201ENST00000371447 SYCNQ0VAF6 134 aa7.78□□□□□ -1.16
PDE6C-201ENST00000371447 LINC00575Q6W349 94 aa7.77□□□□□ -1.17
PDE6C-201ENST00000371447 DIRC1Q969H9 104 aa7.77□□□□□ -1.17
PDE6C-201ENST00000371447 LINC01600Q96MT4 127 aa7.77□□□□□ -1.17
PDE6C-201ENST00000371447 FAM240AA0A1B0GVK7 77 aa7.77□□□□□ -1.17
PDE6C-201ENST00000371447 FAM168BA1KXE4 195 aa7.77□□□□□ -1.17
PDE6C-201ENST00000371447 TRAV10A0A0B4J240 114 aa7.76□□□□□ -1.17
PDE6C-201ENST00000371447 ZNF73O43830 326 aaPredicted RBP7.76□□□□□ -1.17
PDE6C-201ENST00000371447 LINC01556Q5JQF7 62 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 USP17L23D6RBM5 183 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 TMEM256-PLSCR3K7ERE1 68 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 ACYP1P07311 99 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 LINC00643Q86TS7 51 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 NDUFC2-KCTD14E9PQ53 114 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 COX7CP15954 63 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 NKAPP1Q8N9T2 125 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 MDFIQ99750 246 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 CYSTM1Q9H1C7 97 aa7.75□□□□□ -1.17
PDE6C-201ENST00000371447 M0R2N4 97 aa7.74□□□□□ -1.17
PDE6C-201ENST00000371447 LYSTQ99698 3801 aa7.74□□□□□ -1.17
PDE6C-201ENST00000371447 CMYA5Q8N3K9 4069 aa7.73□□□□□ -1.17
PDE6C-201ENST00000371447 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.73□□□□□ -1.17
PDE6C-201ENST00000371447 IGKV2-24A0A0C4DH68 120 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms