RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 SFTA2Q6UW10 78 aa9.66□□□□□ -0.86
RPF1-202ENST00000370656 Q8IZM0 81 aa9.66□□□□□ -0.86
RPF1-202ENST00000370656 M0R143 59 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 HERV-K104P63124 156 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 C9orf163Q8N9P6 203 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 KRTAP9-9Q9BYP9 154 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 KRTAP9-4Q9BYQ2 154 aa9.65□□□□□ -0.86
RPF1-202ENST00000370656 LITAFQ99732 161 aa9.64□□□□□ -0.87
RPF1-202ENST00000370656 APOMO95445 188 aa9.63□□□□□ -0.87
RPF1-202ENST00000370656 LBHQ53QV2 105 aaPredicted RBP9.63□□□□□ -0.87
RPF1-202ENST00000370656 BVES-AS1Q5T3Y7 98 aa9.63□□□□□ -0.87
RPF1-202ENST00000370656 SCGB1D4Q6XE38 83 aa9.63□□□□□ -0.87
RPF1-202ENST00000370656 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
RPF1-202ENST00000370656 Q6ZVH6 145 aa9.62□□□□□ -0.87
RPF1-202ENST00000370656 MALP21145 153 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 CXCL5P42830 114 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 PTTG1IPP53801 180 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 DPH3Q96FX2 82 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 SPANXDQ9BXN6 97 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
RPF1-202ENST00000370656 TMEM238C9JI98 176 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 SDIM1Q6ZPB5 146 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 CEND1Q8N111 149 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 ORAOV1Q8WV07 137 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 TNXBP22105 4242 aa9.6□□□□□ -0.87
RPF1-202ENST00000370656 F8WDY8 70 aa9.59□□□□□ -0.87
RPF1-202ENST00000370656 HINT1P49773 126 aaPredicted RBP9.59□□□□□ -0.87
RPF1-202ENST00000370656 PANO1I0J062 215 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 PRSS2P07478 247 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 ADAMTSL4-AS1Q5T5F5 129 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 KRTAP19-1Q8IUB9 90 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 TOMM7Q9P0U1 55 aa9.58□□□□□ -0.88
RPF1-202ENST00000370656 CIRBPQ14011 172 aaKnown RBP9.57□□□□□ -0.88
RPF1-202ENST00000370656 C15orf56Q8N910 161 aa9.57□□□□□ -0.88
RPF1-202ENST00000370656 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
RPF1-202ENST00000370656 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.56□□□□□ -0.88
RPF1-202ENST00000370656 IFITM1P13164 125 aa9.56□□□□□ -0.88
RPF1-202ENST00000370656 CNBPP62633 177 aaKnown RBP9.56□□□□□ -0.88
RPF1-202ENST00000370656 SRSF9Q13242 221 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPF1-202ENST00000370656 CFAP161Q6P656 301 aa9.56□□□□□ -0.88
RPF1-202ENST00000370656 C2orf48Q96LS8 159 aa9.56□□□□□ -0.88
RPF1-202ENST00000370656 A0A1B0GWB2 263 aa9.55□□□□□ -0.88
RPF1-202ENST00000370656 FXYD2P54710 66 aa9.55□□□□□ -0.88
RPF1-202ENST00000370656 SPAG11BQ08648 103 aa9.55□□□□□ -0.88
RPF1-202ENST00000370656 C7orf33Q8WU49 177 aa9.55□□□□□ -0.88
RPF1-202ENST00000370656 CKS1BP61024 79 aa9.54□□□□□ -0.88
RPF1-202ENST00000370656 COX17Q14061 63 aa9.54□□□□□ -0.88
RPF1-202ENST00000370656 COL5A1-AS1Q5SY13 56 aa9.54□□□□□ -0.88
RPF1-202ENST00000370656 A0A087WYN8 130 aa9.53□□□□□ -0.88
RPF1-202ENST00000370656 LOC107984156A0A0G2JMH3 177 aa9.53□□□□□ -0.88
RPF1-202ENST00000370656 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
RPF1-202ENST00000370656 ARL17AQ8IVW1 177 aa9.53□□□□□ -0.88
RPF1-202ENST00000370656 SMIM13P0DJ93 91 aa9.52□□□□□ -0.89
RPF1-202ENST00000370656 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
RPF1-202ENST00000370656 ERG28Q9UKR5 140 aa9.52□□□□□ -0.89
RPF1-202ENST00000370656 KRTAP4-8A0A0G2JLE6 195 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 A6NDN8 102 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 MEIG1Q5JSS6 88 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 LINC01600Q96MT4 127 aa9.51□□□□□ -0.89
RPF1-202ENST00000370656 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 TMEM238LA0A1B0GVL6 79 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 A6NJY4 79 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 ZNF561-AS1K7EIQ3 104 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 RPL24P83731 157 aaKnown RBP9.5□□□□□ -0.89
RPF1-202ENST00000370656 BATFQ16520 125 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
RPF1-202ENST00000370656 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
RPF1-202ENST00000370656 RNF151Q2KHN1 245 aa9.49□□□□□ -0.89
RPF1-202ENST00000370656 PLAC8Q9NZF1 115 aa9.49□□□□□ -0.89
RPF1-202ENST00000370656 EIF4EBP3O60516 100 aaPredicted RBP9.48□□□□□ -0.89
RPF1-202ENST00000370656 SOSTDC1Q6X4U4 206 aa9.48□□□□□ -0.89
RPF1-202ENST00000370656 A4D1N5 150 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 LINC00158P58513 81 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 HIGD2BQ4VC39 106 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 MIR7-3HGQ8N6C7 128 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 C6orf48Q9UBA6 75 aa9.47□□□□□ -0.89
RPF1-202ENST00000370656 A0A0B4J2C4 111 aa9.46□□□□□ -0.9
RPF1-202ENST00000370656 CFC1BP0CG36 223 aa9.46□□□□□ -0.9
RPF1-202ENST00000370656 CFC1P0CG37 223 aa9.46□□□□□ -0.9
RPF1-202ENST00000370656 DAND5Q8N907 189 aa9.46□□□□□ -0.9
RPF1-202ENST00000370656 NHP2Q9NX24 153 aaKnown RBP9.46□□□□□ -0.9
RPF1-202ENST00000370656 SLPIP03973 132 aa9.45□□□□□ -0.9
RPF1-202ENST00000370656 REG3GQ6UW15 175 aa9.45□□□□□ -0.9
RPF1-202ENST00000370656 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
RPF1-202ENST00000370656 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
RPF1-202ENST00000370656 TLX1NBP0CAT3 122 aa9.44□□□□□ -0.9
RPF1-202ENST00000370656 PFN2P35080 140 aa9.44□□□□□ -0.9
RPF1-202ENST00000370656 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
RPF1-202ENST00000370656 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
RPF1-202ENST00000370656 C9orf116Q5BN46 136 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 179.9 ms