RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 PPDPFLQ8WWR9 84 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 UPK3BQ9BT76 320 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 LINC00959A0A1B0GUT2 108 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 IGKCP01834 107 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 IFITM1P13164 125 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 TTC32Q5I0X7 151 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 C2orf91Q6ZV80 131 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 FAM19A3Q7Z5A8 133 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 PRR34Q9NV39 138 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 TINCRA0A1B0GVN0 87 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 APOMO95445 188 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 ZNF22P17026 224 aaPredicted RBP2.36□□□□□ -2.03
MCF2-202ENST00000370573 REG3AQ06141 175 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 CASC10Q5T4H9 136 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 C6orf223Q8N319 242 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 CHCHD10Q8WYQ3 142 aaPredicted RBP2.36□□□□□ -2.03
MCF2-202ENST00000370573 CHAC1Q9BUX1 264 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 ALMS1Q8TCU4 4167 aa2.36□□□□□ -2.03
MCF2-202ENST00000370573 IGLV10-54A0A075B6I4 117 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 PLNP26678 52 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 KRTAP10-6P60371 365 aaPredicted RBP2.35□□□□□ -2.03
MCF2-202ENST00000370573 KRTAP26-1Q6PEX3 210 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 Q8NBF4 154 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 RAB37Q96AX2 223 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 UBE2WQ96B02 151 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 LINC01600Q96MT4 127 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 IMUPQ9GZP8 106 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 CDKN2A-AS1Q9UH64 79 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 DNAH6Q9C0G6 4158 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 DNAH10Q8IVF4 4471 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 TRBV20-1A0A075B6N2 111 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 IGKV2D-26A0A0A0MRZ7 120 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 IGHV3OR16-9A0A0B4J2B5 98 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 TMEM223A0PJW6 202 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 IBA57-AS1B1ANH7 110 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 C3orf84H3BNL1 204 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 SNCGO76070 127 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 XCL1P47992 114 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 SS18Q15532 418 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 TMEM170BQ5T4T1 132 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 UBE2DNLQ8IWF7 75 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 PRO0461Q9UI25 63 aa2.35□□□□□ -2.03
MCF2-202ENST00000370573 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
MCF2-202ENST00000370573 HERVK_113P63121 156 aa2.34□□□□□ -2.03
MCF2-202ENST00000370573 C5orf38Q86SI9 138 aa2.34□□□□□ -2.03
MCF2-202ENST00000370573 TEN1Q86WV5 123 aa2.34□□□□□ -2.03
MCF2-202ENST00000370573 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
MCF2-202ENST00000370573 DHRS4-AS1Q9P1J3 65 aa2.34□□□□□ -2.03
MCF2-202ENST00000370573 DNAH2Q9P225 4427 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 IGHV3-64A0A075B6Q5 118 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 TRAV8-3A0A0A6YYJ7 113 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 NBDYA0A0U1RRE5 68 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 TSPEAR-AS2P59090 65 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 MIAQ16674 131 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 PCP2Q8IVA1 136 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 TP73-AS1Q9UF72 201 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 V9GYY9 64 aa2.34□□□□□ -2.04
MCF2-202ENST00000370573 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 TRAV8-4A0A0B4J246 113 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 FAM240AA0A1B0GVK7 77 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 LEPROTO15243 131 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 CRPP02741 224 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 ETDBQ3ZM63 59 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 SACSQ9NZJ4 4579 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 IGKV2D-24A0A075B6R9 120 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 A0A087WYN8 130 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 IGHV1-58A0A0C4DH39 117 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 M0R2N4 97 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 COX7A2LO14548 114 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 NMUP48645 174 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 WFDC2Q14508 124 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 MEIG1Q5JSS6 88 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 C10orf126Q8N4M7 172 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 LITAFQ99732 161 aa2.33□□□□□ -2.04
MCF2-202ENST00000370573 C9JAW5 83 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 J3QQQ9 107 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 UQCRQO14949 82 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 LY6G6CO95867 125 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 KIAA0087Q14695 138 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 Q6ZR54 194 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 HYDINQ4G0P3 5121 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 EPM2AB3EWF7 344 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 HERVK_113P61574 105 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 CEND1Q8N111 149 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 PLEKHB2Q96CS7 222 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 LINC00526Q96FQ7 95 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 PRO0628Q9UI54 55 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 DNAH17Q9UFH2 4485 aa2.32□□□□□ -2.04
MCF2-202ENST00000370573 TRBV7-7A0A0K0K1E9 115 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 ACYP1P07311 99 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 SCGB1C2P0DMR2 95 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
MCF2-202ENST00000370573 C15orf56Q8N910 161 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 COX7B2Q8TF08 81 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 ZNF625Q96I27 306 aaPredicted RBP2.31□□□□□ -2.04
MCF2-202ENST00000370573 TOMM7Q9P0U1 55 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 MYMXA0A1B0GTQ4 84 aa2.31□□□□□ -2.04
MCF2-202ENST00000370573 CCDC179H3BU77 68 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms