RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 GNRH2O43555 120 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 TRGV3P03979 118 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 SAA2P0DJI9 122 aaPredicted RBP3.46□□□□□ -1.86
UBE3D-202ENST00000369746 WT1-ASQ06250 92 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 LINC00308Q8TCZ7 52 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 C14orf132Q9NPU4 83 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 SNURFQ9Y675 71 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 LOC110117498A0A087WWA1 95 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 IGLV5-52A0A0A0MRZ9 124 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 LINC00476Q8WZB0 136 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 ZNF625Q96I27 306 aaPredicted RBP3.46□□□□□ -1.86
UBE3D-202ENST00000369746 KIF25-AS1Q9Y6Z4 181 aa3.46□□□□□ -1.86
UBE3D-202ENST00000369746 MAP1AP78559 2803 aaPredicted RBP3.46□□□□□ -1.86
UBE3D-202ENST00000369746 NUPR2A6NF83 97 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 HCG22E2RYF7 251 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 NREPQ16612 68 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 ORMDL1Q9P0S3 153 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 AKAP6Q13023 2319 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 CSMD2Q7Z408 3487 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 TRBV6-8A0A0A6YYG3 113 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 A6NED7 52 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 IGHV3-48P01763 117 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 COX7A1P24310 79 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 ELOF1P60002 83 aaKnown RBP3.45□□□□□ -1.86
UBE3D-202ENST00000369746 LYZP61626 148 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 KLK15Q9H2R5 256 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 DNAJC13O75165 2243 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 ARFGEF3Q5TH69 2177 aa3.45□□□□□ -1.86
UBE3D-202ENST00000369746 C20orf203Q8NBC4 194 aa3.44□□□□□ -1.86
UBE3D-202ENST00000369746 IGHV3-43A0A0B4J1X8 118 aa3.44□□□□□ -1.86
UBE3D-202ENST00000369746 Q5VV11 94 aa3.44□□□□□ -1.86
UBE3D-202ENST00000369746 CDC42SE1Q9NRR8 79 aa3.44□□□□□ -1.86
UBE3D-202ENST00000369746 DHRS4-AS1Q9P1J3 65 aa3.44□□□□□ -1.86
UBE3D-202ENST00000369746 TRAV12-3A0A0B4J271 114 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 LY6HO94772 140 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 DNAH9Q9NYC9 4486 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 DNAH7Q8WXX0 4024 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 PSCAO43653 123 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 IGLV1-51P01701 117 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 LINC01547P58512 204 aaPredicted RBP3.43□□□□□ -1.86
UBE3D-202ENST00000369746 KRTAP10-11P60412 298 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 C9orf47Q6ZRZ4 202 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 Q8N814 137 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 SACSQ9NZJ4 4579 aa3.43□□□□□ -1.86
UBE3D-202ENST00000369746 LOC101927531A0A1B0GV80 90 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 I3L2K1 104 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGKV1-17P01599 117 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 C1orf134Q5TEV5 83 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGLV4-3A0A075B6K6 122 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 TRAV10A0A0B4J240 114 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 A0A1B0GVY2 172 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGLV2-23P01705 113 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGHV1-46P01743 117 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 OCR1Q9BZK8 76 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 C8orf17Q9NRJ1 99 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGKV2-40A0A087WW87 121 aaPredicted RBP3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGHV3-16A0A0C4DH30 117 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGLV5-39A0A0G2JS06 123 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 IGKV2D-40P01614 121 aaPredicted RBP3.42□□□□□ -1.86
UBE3D-202ENST00000369746 CRPP02741 224 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 MIR7-3HGQ8N6C7 128 aa3.42□□□□□ -1.86
UBE3D-202ENST00000369746 NDUFB1O75438 58 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 RPL27AP46776 148 aaKnown RBP3.41□□□□□ -1.86
UBE3D-202ENST00000369746 LUZP6Q538Z0 58 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 MINOS1Q5TGZ0 78 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 C1orf64Q8NEQ6 169 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
UBE3D-202ENST00000369746 RNF5Q99942 180 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 MINOS1-NBL1R4GNA1 71 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 A6NDX4 124 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 LINC00315P59091 139 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 IGFL4Q6B9Z1 124 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 Q8N3U1 123 aa3.41□□□□□ -1.86
UBE3D-202ENST00000369746 TACC2O95359 2948 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 PCLOQ9Y6V0 5065 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 IGHV3-72A0A0B4J1Y9 119 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 BPY2O14599 106 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 HCP5Q6MZN7 132 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 FAM104AQ969W3 186 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 Q9BRP9 147 aa3.4□□□□□ -1.86
UBE3D-202ENST00000369746 TRAV21A0A0B4J279 112 aa3.4□□□□□ -1.87
UBE3D-202ENST00000369746 MRGPRG-AS1Q2M3A8 158 aa3.4□□□□□ -1.87
UBE3D-202ENST00000369746 Q6ZQT0 140 aa3.4□□□□□ -1.87
UBE3D-202ENST00000369746 ZFAND2AQ8N6M9 145 aa3.4□□□□□ -1.87
UBE3D-202ENST00000369746 ZCCHC13Q8WW36 166 aaKnown RBP3.4□□□□□ -1.87
UBE3D-202ENST00000369746 C9orf116Q5BN46 136 aaPredicted RBP3.39□□□□□ -1.87
UBE3D-202ENST00000369746 CSNK1G2-AS1Q8NCQ2 148 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 CDC42SE2Q9NRR3 84 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 TNCP24821 2201 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 TLN2Q9Y4G6 2542 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 IGHV7-81A0A0B4J1V7 117 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 IGKV2-29A2NJV5 120 aaPredicted RBP3.39□□□□□ -1.87
UBE3D-202ENST00000369746 CHKB-CPT1BH3BT56 60 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 NCR3O14931 201 aa3.39□□□□□ -1.87
UBE3D-202ENST00000369746 RPL39P62891 51 aaKnown RBP3.39□□□□□ -1.87
UBE3D-202ENST00000369746 VPS13CQ709C8 3753 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 IGHV3-15A0A0B4J1V0 119 aa3.38□□□□□ -1.87
UBE3D-202ENST00000369746 C9orf129Q5T035 196 aaKnown RBP3.38□□□□□ -1.87
UBE3D-202ENST00000369746 FAM74A4Q5TZK3 123 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms