RNA–Protein interactions for RNA: ENST00000369063.7

RTN4IP1-201, Transcript of reticulon 4 interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4IP1, Length 1,682 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-201ENST00000369063 Q5VSD8 79 aa9.72□□□□□ -0.85
RTN4IP1-201ENST00000369063 UNQ6190/PRO20217Q6UXQ8 127 aa9.72□□□□□ -0.85
RTN4IP1-201ENST00000369063 CEND1Q8N111 149 aa9.72□□□□□ -0.85
RTN4IP1-201ENST00000369063 ZNF625Q96I27 306 aaPredicted RBP9.72□□□□□ -0.85
RTN4IP1-201ENST00000369063 FAM229AH3BQW9 127 aa9.71□□□□□ -0.85
RTN4IP1-201ENST00000369063 C2orf82Q6UX34 121 aa9.71□□□□□ -0.85
RTN4IP1-201ENST00000369063 LINC00474Q9P2X8 69 aa9.71□□□□□ -0.85
RTN4IP1-201ENST00000369063 A0A087WYN8 130 aa9.71□□□□□ -0.86
RTN4IP1-201ENST00000369063 LOC107984640A0A0U1RRK4 108 aa9.71□□□□□ -0.86
RTN4IP1-201ENST00000369063 CXCL5P42830 114 aa9.71□□□□□ -0.86
RTN4IP1-201ENST00000369063 Q6ZVH6 145 aa9.71□□□□□ -0.86
RTN4IP1-201ENST00000369063 COL5A1-AS1Q5SY13 56 aa9.7□□□□□ -0.86
RTN4IP1-201ENST00000369063 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
RTN4IP1-201ENST00000369063 C6orf48Q9UBA6 75 aa9.7□□□□□ -0.86
RTN4IP1-201ENST00000369063 A6NDN8 102 aa9.69□□□□□ -0.86
RTN4IP1-201ENST00000369063 PTTG1IPP53801 180 aa9.69□□□□□ -0.86
RTN4IP1-201ENST00000369063 CKS1BP61024 79 aa9.69□□□□□ -0.86
RTN4IP1-201ENST00000369063 SRRM2Q9UQ35 2752 aaKnown RBP9.69□□□□□ -0.86
RTN4IP1-201ENST00000369063 TRBV30A0A0K0K1B3 111 aa9.68□□□□□ -0.86
RTN4IP1-201ENST00000369063 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
RTN4IP1-201ENST00000369063 SPANXCQ9NY87 97 aa9.68□□□□□ -0.86
RTN4IP1-201ENST00000369063 PLAC8Q9NZF1 115 aa9.68□□□□□ -0.86
RTN4IP1-201ENST00000369063 TLX1NBP0CAT3 122 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 GAGE2BQ13066 116 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 MEIG1Q5JSS6 88 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 TMEM238LA0A1B0GVL6 79 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 A6NJY4 79 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 RPL18AQ02543 176 aaKnown RBP9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 LITAFQ99732 161 aa9.67□□□□□ -0.86
RTN4IP1-201ENST00000369063 COPS9Q8WXC6 57 aa9.66□□□□□ -0.86
RTN4IP1-201ENST00000369063 IFITM1P13164 125 aa9.65□□□□□ -0.86
RTN4IP1-201ENST00000369063 FXYD2P54710 66 aa9.65□□□□□ -0.86
RTN4IP1-201ENST00000369063 PLA2G1BP04054 148 aaKnown RBP9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 C9orf116Q5BN46 136 aaPredicted RBP9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 ADAMTSL4-AS1Q5T5F5 129 aa9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 Q6ZRP5 223 aa9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 PCLOQ9Y6V0 5065 aa9.64□□□□□ -0.87
RTN4IP1-201ENST00000369063 VPS13BQ7Z7G8 4022 aa9.63□□□□□ -0.87
RTN4IP1-201ENST00000369063 NDUFC2-KCTD14E9PQ53 114 aa9.63□□□□□ -0.87
RTN4IP1-201ENST00000369063 SMIM13P0DJ93 91 aa9.63□□□□□ -0.87
RTN4IP1-201ENST00000369063 MUSTN1Q8IVN3 82 aa9.63□□□□□ -0.87
RTN4IP1-201ENST00000369063 ABCA13Q86UQ4 5058 aa9.63□□□□□ -0.87
RTN4IP1-201ENST00000369063 COX17Q14061 63 aa9.62□□□□□ -0.87
RTN4IP1-201ENST00000369063 ERG28Q9UKR5 140 aa9.62□□□□□ -0.87
RTN4IP1-201ENST00000369063 LINC00158P58513 81 aa9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 PPDPFQ9H3Y8 114 aa9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 A0A1W2PNN7 141 aa9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 KRTAP10-4P60372 401 aaPredicted RBP9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
RTN4IP1-201ENST00000369063 A0A0U1RRA0 63 aa9.6□□□□□ -0.87
RTN4IP1-201ENST00000369063 A0A1B0GWB2 263 aa9.59□□□□□ -0.87
RTN4IP1-201ENST00000369063 LINC00308Q8TCZ7 52 aa9.59□□□□□ -0.87
RTN4IP1-201ENST00000369063 A4D1N5 150 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 PFN2P35080 140 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 RPL37AP61513 92 aaKnown RBP9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 MIR7-3HGQ8N6C7 128 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 DAND5Q8N907 189 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
RTN4IP1-201ENST00000369063 TAX1BP3O14907 124 aa9.57□□□□□ -0.88
RTN4IP1-201ENST00000369063 C9orf129Q5T035 196 aaKnown RBP9.57□□□□□ -0.88
RTN4IP1-201ENST00000369063 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
RTN4IP1-201ENST00000369063 NPC2P61916 151 aa9.56□□□□□ -0.88
RTN4IP1-201ENST00000369063 CFC1BP0CG36 223 aa9.55□□□□□ -0.88
RTN4IP1-201ENST00000369063 CFC1P0CG37 223 aa9.55□□□□□ -0.88
RTN4IP1-201ENST00000369063 A0A0B4J2C4 111 aa9.55□□□□□ -0.88
RTN4IP1-201ENST00000369063 RAB37Q96AX2 223 aa9.55□□□□□ -0.88
RTN4IP1-201ENST00000369063 KRTAP7-1Q8IUC3 87 aa9.54□□□□□ -0.88
RTN4IP1-201ENST00000369063 XAGE1AQ9HD64 81 aa9.54□□□□□ -0.88
RTN4IP1-201ENST00000369063 C9orf118A6NHY6 69 aa9.53□□□□□ -0.88
RTN4IP1-201ENST00000369063 K7ERJ3 54 aa9.53□□□□□ -0.88
RTN4IP1-201ENST00000369063 SOSTDC1Q6X4U4 206 aa9.53□□□□□ -0.88
RTN4IP1-201ENST00000369063 PRO1854Q9UHT4 67 aa9.53□□□□□ -0.88
RTN4IP1-201ENST00000369063 LOC107984156A0A0G2JMH3 177 aa9.52□□□□□ -0.89
RTN4IP1-201ENST00000369063 ARL17AQ8IVW1 177 aa9.52□□□□□ -0.89
RTN4IP1-201ENST00000369063 A0A1B0GV90 55 aa9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 EIF4EBP3O60516 100 aaPredicted RBP9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 PHF5AQ7RTV0 110 aaKnown RBP9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 FLG2Q5D862 2391 aaPredicted RBP9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
RTN4IP1-201ENST00000369063 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
RTN4IP1-201ENST00000369063 PRR3P79522 188 aaKnown RBP9.49□□□□□ -0.89
RTN4IP1-201ENST00000369063 H3BUT2 72 aa9.48□□□□□ -0.89
RTN4IP1-201ENST00000369063 SERTAD4-AS1Q5TG53 156 aa9.48□□□□□ -0.89
RTN4IP1-201ENST00000369063 M0QXV9 152 aa9.48□□□□□ -0.89
RTN4IP1-201ENST00000369063 NDUFC2O95298 119 aa9.47□□□□□ -0.89
RTN4IP1-201ENST00000369063 TRAV13-2A0A0B4J235 113 aa9.46□□□□□ -0.89
RTN4IP1-201ENST00000369063 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.89
RTN4IP1-201ENST00000369063 C22orf24Q9Y442 160 aa9.46□□□□□ -0.89
RTN4IP1-201ENST00000369063 PSORS1C2Q9UIG4 136 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 A0A1W2PPM0 123 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 TSPAN13O95857 204 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 FABP2P12104 132 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 VAMP3Q15836 100 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 KRTAP11-1Q8IUC1 163 aa9.45□□□□□ -0.9
RTN4IP1-201ENST00000369063 Q1RN00 199 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms