RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ZNF561-AS1K7EIQ3 104 aa11.98□□□□□ -0.49
CHTOP-203ENST00000368690 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
CHTOP-203ENST00000368690 RBM3P98179 157 aaKnown RBP11.98□□□□□ -0.49
CHTOP-203ENST00000368690 SERP1Q9Y6X1 66 aa11.98□□□□□ -0.49
CHTOP-203ENST00000368690 C6orf223Q8N319 242 aa11.97□□□□□ -0.49
CHTOP-203ENST00000368690 KIAA0087Q14695 138 aa11.96□□□□□ -0.49
CHTOP-203ENST00000368690 MUC7Q8TAX7 377 aa11.96□□□□□ -0.49
CHTOP-203ENST00000368690 PDE6GP18545 87 aa11.96□□□□□ -0.5
CHTOP-203ENST00000368690 KRTAP10-3P60369 221 aa11.96□□□□□ -0.5
CHTOP-203ENST00000368690 H7BZZ5 65 aa11.95□□□□□ -0.5
CHTOP-203ENST00000368690 PRR3P79522 188 aaKnown RBP11.95□□□□□ -0.5
CHTOP-203ENST00000368690 KLKP1Q107X0 134 aa11.95□□□□□ -0.5
CHTOP-203ENST00000368690 C6orf99Q4VX62 202 aa11.95□□□□□ -0.5
CHTOP-203ENST00000368690 LINC00482Q8N8I6 264 aa11.95□□□□□ -0.5
CHTOP-203ENST00000368690 HRCT1Q6UXD1 115 aa11.95□□□□□ -0.5
CHTOP-203ENST00000368690 CXCL6P80162 114 aa11.93□□□□□ -0.5
CHTOP-203ENST00000368690 CD164L2Q6UWJ8 174 aa11.93□□□□□ -0.5
CHTOP-203ENST00000368690 LINC00612Q8N6U2 182 aa11.93□□□□□ -0.5
CHTOP-203ENST00000368690 C19orf73Q9NVV2 129 aa11.93□□□□□ -0.5
CHTOP-203ENST00000368690 MAST4O15021 2626 aa11.93□□□□□ -0.5
CHTOP-203ENST00000368690 LINC01547P58512 204 aaPredicted RBP11.92□□□□□ -0.5
CHTOP-203ENST00000368690 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
CHTOP-203ENST00000368690 MRAPQ8TCY5 172 aa11.92□□□□□ -0.5
CHTOP-203ENST00000368690 TENM1Q9UKZ4 2725 aa11.92□□□□□ -0.5
CHTOP-203ENST00000368690 ATRQ13535 2644 aa11.92□□□□□ -0.5
CHTOP-203ENST00000368690 RPL35AP18077 110 aaKnown RBP11.91□□□□□ -0.5
CHTOP-203ENST00000368690 Q6ZVQ6 151 aa11.9□□□□□ -0.5
CHTOP-203ENST00000368690 GYPEP15421 78 aa11.89□□□□□ -0.51
CHTOP-203ENST00000368690 LAMTOR3Q9UHA4 124 aa11.88□□□□□ -0.51
CHTOP-203ENST00000368690 NOTCH3Q9UM47 2321 aa11.87□□□□□ -0.51
CHTOP-203ENST00000368690 IGLV1-51P01701 117 aa11.87□□□□□ -0.51
CHTOP-203ENST00000368690 WFDC10AQ9H1F0 79 aa11.87□□□□□ -0.51
CHTOP-203ENST00000368690 NDUFC1O43677 76 aa11.86□□□□□ -0.51
CHTOP-203ENST00000368690 Q8NDZ9 215 aa11.86□□□□□ -0.51
CHTOP-203ENST00000368690 IGLV6-57P01721 117 aa11.85□□□□□ -0.51
CHTOP-203ENST00000368690 HAMPP81172 84 aa11.85□□□□□ -0.51
CHTOP-203ENST00000368690 CHCHD10Q8WYQ3 142 aaPredicted RBP11.85□□□□□ -0.51
CHTOP-203ENST00000368690 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
CHTOP-203ENST00000368690 PRO0255Q9UI72 69 aa11.84□□□□□ -0.51
CHTOP-203ENST00000368690 VWFP04275 2813 aa11.83□□□□□ -0.52
CHTOP-203ENST00000368690 TRAV10A0A0B4J240 114 aa11.83□□□□□ -0.52
CHTOP-203ENST00000368690 DEFB130BP0DP73 79 aa11.83□□□□□ -0.52
CHTOP-203ENST00000368690 DEFB130AP0DP74 79 aa11.83□□□□□ -0.52
CHTOP-203ENST00000368690 ATP5EP56381 51 aaPredicted RBP11.83□□□□□ -0.52
CHTOP-203ENST00000368690 LINC00269Q8N2A0 174 aa11.82□□□□□ -0.52
CHTOP-203ENST00000368690 SMIM26A0A096LP01 95 aa11.82□□□□□ -0.52
CHTOP-203ENST00000368690 M0R2N4 97 aa11.82□□□□□ -0.52
CHTOP-203ENST00000368690 KRTAP24-1Q3LI83 254 aa11.82□□□□□ -0.52
CHTOP-203ENST00000368690 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
CHTOP-203ENST00000368690 A0A0J9YWU9 116 aa11.81□□□□□ -0.52
CHTOP-203ENST00000368690 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
CHTOP-203ENST00000368690 Q6ZQY7 126 aa11.8□□□□□ -0.52
CHTOP-203ENST00000368690 FBN1P35555 2871 aaKnown RBP11.79□□□□□ -0.52
CHTOP-203ENST00000368690 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
CHTOP-203ENST00000368690 REG3AQ06141 175 aa11.79□□□□□ -0.52
CHTOP-203ENST00000368690 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.79□□□□□ -0.52
CHTOP-203ENST00000368690 PRO0628Q9UI54 55 aa11.79□□□□□ -0.52
CHTOP-203ENST00000368690 Q8N3U1 123 aa11.78□□□□□ -0.52
CHTOP-203ENST00000368690 ERC2-IT1O76042 136 aa11.78□□□□□ -0.52
CHTOP-203ENST00000368690 SPATA3Q8NHX4 192 aa11.78□□□□□ -0.52
CHTOP-203ENST00000368690 F8WEM9 126 aa11.77□□□□□ -0.53
CHTOP-203ENST00000368690 RMI2Q96E14 147 aa11.77□□□□□ -0.53
CHTOP-203ENST00000368690 GVQW2A0A096LPI5 108 aaPredicted RBP11.76□□□□□ -0.53
CHTOP-203ENST00000368690 ANGP03950 147 aaKnown RBP11.76□□□□□ -0.53
CHTOP-203ENST00000368690 SNURFQ9Y675 71 aa11.76□□□□□ -0.53
CHTOP-203ENST00000368690 TRBV7-6A0A0J9YX20 115 aa11.75□□□□□ -0.53
CHTOP-203ENST00000368690 DIRC1Q969H9 104 aa11.75□□□□□ -0.53
CHTOP-203ENST00000368690 SPAG11BQ08648 103 aa11.75□□□□□ -0.53
CHTOP-203ENST00000368690 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
CHTOP-203ENST00000368690 UNQ6190/PRO20217Q6UXQ8 127 aa11.74□□□□□ -0.53
CHTOP-203ENST00000368690 C10orf25Q5T742 122 aa11.74□□□□□ -0.53
CHTOP-203ENST00000368690 IGLV10-54A0A075B6I4 117 aa11.73□□□□□ -0.53
CHTOP-203ENST00000368690 FP248Q71RG6 208 aaPredicted RBP11.73□□□□□ -0.53
CHTOP-203ENST00000368690 STAB1Q9NY15 2570 aa11.73□□□□□ -0.53
CHTOP-203ENST00000368690 LYRM9A8MSI8 78 aa11.72□□□□□ -0.53
CHTOP-203ENST00000368690 X6R8D5 127 aa11.72□□□□□ -0.53
CHTOP-203ENST00000368690 MIFP14174 115 aa11.72□□□□□ -0.53
CHTOP-203ENST00000368690 LINC00336Q6ZUF6 198 aa11.72□□□□□ -0.53
CHTOP-203ENST00000368690 TM2D3Q9BRN9 247 aa11.72□□□□□ -0.53
CHTOP-203ENST00000368690 A0A096LPF7 62 aa11.71□□□□□ -0.53
CHTOP-203ENST00000368690 NREPQ16612 68 aa11.7□□□□□ -0.54
CHTOP-203ENST00000368690 COX7BP24311 80 aa11.69□□□□□ -0.54
CHTOP-203ENST00000368690 ELOF1P60002 83 aaKnown RBP11.69□□□□□ -0.54
CHTOP-203ENST00000368690 ZNF73O43830 326 aaPredicted RBP11.68□□□□□ -0.54
CHTOP-203ENST00000368690 COL6A5A8TX70 2615 aa11.68□□□□□ -0.54
CHTOP-203ENST00000368690 BPY2O14599 106 aa11.67□□□□□ -0.54
CHTOP-203ENST00000368690 TMEM254Q8TBM7 123 aa11.67□□□□□ -0.54
CHTOP-203ENST00000368690 PRR34Q9NV39 138 aa11.66□□□□□ -0.54
CHTOP-203ENST00000368690 SCXQ7RTU7 201 aa11.64□□□□□ -0.55
CHTOP-203ENST00000368690 CELA1Q9UNI1 258 aa11.64□□□□□ -0.55
CHTOP-203ENST00000368690 LELP1Q5T871 98 aa11.63□□□□□ -0.55
CHTOP-203ENST00000368690 C6orf48Q9UBA6 75 aa11.62□□□□□ -0.55
CHTOP-203ENST00000368690 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
CHTOP-203ENST00000368690 A0A0U1RQV1 116 aa11.6□□□□□ -0.55
CHTOP-203ENST00000368690 OCR1Q9BZK8 76 aa11.6□□□□□ -0.55
CHTOP-203ENST00000368690 VPREB1P12018 145 aa11.59□□□□□ -0.55
CHTOP-203ENST00000368690 OXLD1Q5BKU9 147 aa11.59□□□□□ -0.55
CHTOP-203ENST00000368690 LINC00528Q8N1L1 170 aa11.59□□□□□ -0.55
CHTOP-203ENST00000368690 PKD1L1Q8TDX9 2849 aa11.59□□□□□ -0.55
CHTOP-203ENST00000368690 M0R378 163 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms