RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 C16orf90A8MZG2 172 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 XAGE1AQ9HD64 81 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 PGPEP1Q9NXJ5 209 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 DNAH11Q96DT5 4516 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 A6NDN8 102 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 EIF4EBP3O60516 100 aaPredicted RBP7.93□□□□□ -1.14
TUBE1-202ENST00000368662 NDUFC2O95298 119 aa7.93□□□□□ -1.14
TUBE1-202ENST00000368662 GAGE2BQ13066 116 aa7.92□□□□□ -1.14
TUBE1-202ENST00000368662 BATFQ16520 125 aa7.92□□□□□ -1.14
TUBE1-202ENST00000368662 LINC00474Q9P2X8 69 aa7.92□□□□□ -1.14
TUBE1-202ENST00000368662 SDIM1Q6ZPB5 146 aa7.91□□□□□ -1.14
TUBE1-202ENST00000368662 SNHG12Q9BXW3 62 aa7.91□□□□□ -1.14
TUBE1-202ENST00000368662 C9orf129Q5T035 196 aaKnown RBP7.9□□□□□ -1.14
TUBE1-202ENST00000368662 NHP2Q9NX24 153 aaKnown RBP7.9□□□□□ -1.14
TUBE1-202ENST00000368662 A0A096LNI7 61 aa7.9□□□□□ -1.15
TUBE1-202ENST00000368662 A0A0B4J2C4 111 aa7.9□□□□□ -1.15
TUBE1-202ENST00000368662 PLA2G2DQ9UNK4 145 aa7.9□□□□□ -1.15
TUBE1-202ENST00000368662 PKD1P98161 4303 aa7.89□□□□□ -1.15
TUBE1-202ENST00000368662 A0A1B0GWB2 263 aa7.89□□□□□ -1.15
TUBE1-202ENST00000368662 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
TUBE1-202ENST00000368662 CFC1P0CG37 223 aa7.89□□□□□ -1.15
TUBE1-202ENST00000368662 RAB37Q96AX2 223 aa7.89□□□□□ -1.15
TUBE1-202ENST00000368662 KRTAP10-2P60368 255 aa7.88□□□□□ -1.15
TUBE1-202ENST00000368662 DNAH5Q8TE73 4624 aa7.88□□□□□ -1.15
TUBE1-202ENST00000368662 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
TUBE1-202ENST00000368662 IGKV2-24A0A0C4DH68 120 aa7.88□□□□□ -1.15
TUBE1-202ENST00000368662 LINC01620Q4KN68 170 aa7.88□□□□□ -1.15
TUBE1-202ENST00000368662 TRBV10-2A0A0K0K1G8 114 aa7.87□□□□□ -1.15
TUBE1-202ENST00000368662 VPREB1P12018 145 aa7.87□□□□□ -1.15
TUBE1-202ENST00000368662 COL5A1-AS1Q5SY13 56 aa7.87□□□□□ -1.15
TUBE1-202ENST00000368662 PRO1854Q9UHT4 67 aa7.87□□□□□ -1.15
TUBE1-202ENST00000368662 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
TUBE1-202ENST00000368662 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
TUBE1-202ENST00000368662 LBHQ53QV2 105 aaPredicted RBP7.86□□□□□ -1.15
TUBE1-202ENST00000368662 NKAPP1Q8N9T2 125 aa7.86□□□□□ -1.15
TUBE1-202ENST00000368662 FUSP35637 526 aaKnown RBP eCLIP7.85□□□□□ -1.15
TUBE1-202ENST00000368662 RYR3Q15413 4870 aa7.85□□□□□ -1.15
TUBE1-202ENST00000368662 IGLV5-37A0A075B6J1 123 aa7.85□□□□□ -1.15
TUBE1-202ENST00000368662 K7ERJ3 54 aa7.85□□□□□ -1.15
TUBE1-202ENST00000368662 Q8NDZ9 215 aa7.85□□□□□ -1.15
TUBE1-202ENST00000368662 M0R378 163 aa7.84□□□□□ -1.15
TUBE1-202ENST00000368662 LINC00337Q8N6G1 96 aa7.84□□□□□ -1.15
TUBE1-202ENST00000368662 SPACA4Q8TDM5 124 aa7.84□□□□□ -1.15
TUBE1-202ENST00000368662 NCR3O14931 201 aa7.84□□□□□ -1.16
TUBE1-202ENST00000368662 CHTF8P0CG12 524 aa7.84□□□□□ -1.16
TUBE1-202ENST00000368662 PRR3P79522 188 aaKnown RBP7.84□□□□□ -1.16
TUBE1-202ENST00000368662 SERTAD4-AS1Q5TG53 156 aa7.84□□□□□ -1.16
TUBE1-202ENST00000368662 TMEM126AQ9H061 195 aa7.84□□□□□ -1.16
TUBE1-202ENST00000368662 FAM168BA1KXE4 195 aa7.83□□□□□ -1.16
TUBE1-202ENST00000368662 S100A7L2Q5SY68 101 aa7.83□□□□□ -1.16
TUBE1-202ENST00000368662 OR13C6PQ8NH95 151 aa7.83□□□□□ -1.16
TUBE1-202ENST00000368662 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
TUBE1-202ENST00000368662 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
TUBE1-202ENST00000368662 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
TUBE1-202ENST00000368662 RPL13AP40429 203 aaKnown RBP7.82□□□□□ -1.16
TUBE1-202ENST00000368662 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
TUBE1-202ENST00000368662 CBY1Q9Y3M2 126 aa7.82□□□□□ -1.16
TUBE1-202ENST00000368662 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.82□□□□□ -1.16
TUBE1-202ENST00000368662 C22orf24Q9Y442 160 aa7.81□□□□□ -1.16
TUBE1-202ENST00000368662 PKHD1P08F94 4074 aa7.81□□□□□ -1.16
TUBE1-202ENST00000368662 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
TUBE1-202ENST00000368662 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
TUBE1-202ENST00000368662 MRPL55Q7Z7F7 128 aaKnown RBP7.81□□□□□ -1.16
TUBE1-202ENST00000368662 DNAH8Q96JB1 4490 aa7.8□□□□□ -1.16
TUBE1-202ENST00000368662 M0QXV9 152 aa7.8□□□□□ -1.16
TUBE1-202ENST00000368662 Q1RN00 199 aa7.8□□□□□ -1.16
TUBE1-202ENST00000368662 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
TUBE1-202ENST00000368662 PANO1I0J062 215 aa7.79□□□□□ -1.16
TUBE1-202ENST00000368662 TAX1BP3O14907 124 aa7.79□□□□□ -1.16
TUBE1-202ENST00000368662 EPM2AB3EWF7 344 aa7.79□□□□□ -1.16
TUBE1-202ENST00000368662 H7C2G1 150 aa7.79□□□□□ -1.16
TUBE1-202ENST00000368662 C7orf33Q8WU49 177 aa7.79□□□□□ -1.16
TUBE1-202ENST00000368662 A0A087WYN8 130 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 TSPAN13O95857 204 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 C9orf118A6NHY6 69 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 KRTAP10-1P60331 282 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 Q6ZSA8 131 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 LINC00167Q96N53 147 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 PLAC8Q9NZF1 115 aa7.78□□□□□ -1.16
TUBE1-202ENST00000368662 TRAV23DV6A0A075B6W5 121 aa7.76□□□□□ -1.17
TUBE1-202ENST00000368662 GAGE10A6NGK3 116 aa7.76□□□□□ -1.17
TUBE1-202ENST00000368662 RPL28P46779 137 aaKnown RBP7.76□□□□□ -1.17
TUBE1-202ENST00000368662 IGLV1-50A0A075B6I6 118 aa7.76□□□□□ -1.17
TUBE1-202ENST00000368662 PSMB2P49721 201 aa7.76□□□□□ -1.17
TUBE1-202ENST00000368662 SMIM11BQ8TCY0 68 aa7.76□□□□□ -1.17
TUBE1-202ENST00000368662 COX6CP09669 75 aa7.75□□□□□ -1.17
TUBE1-202ENST00000368662 KCNQ1DNQ9H478 68 aa7.75□□□□□ -1.17
TUBE1-202ENST00000368662 LRP1BQ9NZR2 4599 aa7.75□□□□□ -1.17
TUBE1-202ENST00000368662 H3BUT2 72 aa7.75□□□□□ -1.17
TUBE1-202ENST00000368662 LYRM7Q5U5X0 104 aa7.75□□□□□ -1.17
TUBE1-202ENST00000368662 PHF5AQ7RTV0 110 aaKnown RBP7.74□□□□□ -1.17
TUBE1-202ENST00000368662 FAM30AQ9NZY2 134 aa7.74□□□□□ -1.17
TUBE1-202ENST00000368662 RPL37AP8A6NKH3 93 aa7.73□□□□□ -1.17
TUBE1-202ENST00000368662 PRYO14603 147 aa7.73□□□□□ -1.17
TUBE1-202ENST00000368662 UBE2BP63146 152 aa7.73□□□□□ -1.17
TUBE1-202ENST00000368662 DYNC1H1Q14204 4646 aaKnown RBP7.73□□□□□ -1.17
TUBE1-202ENST00000368662 TRIAP1O43715 76 aa7.73□□□□□ -1.17
TUBE1-202ENST00000368662 ZNF73O43830 326 aaPredicted RBP7.73□□□□□ -1.17
TUBE1-202ENST00000368662 VAMP3Q15836 100 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms