RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 PKHD1P08F94 4074 aa19.08■□□□□ 0.64
ECHS1-201ENST00000368547 A4D1N5 150 aa19.07■□□□□ 0.64
ECHS1-201ENST00000368547 DNAH5Q8TE73 4624 aa19.07■□□□□ 0.64
ECHS1-201ENST00000368547 C16orf90A8MZG2 172 aa19.04■□□□□ 0.64
ECHS1-201ENST00000368547 RNF151Q2KHN1 245 aa19.04■□□□□ 0.64
ECHS1-201ENST00000368547 SOSTDC1Q6X4U4 206 aa19.04■□□□□ 0.64
ECHS1-201ENST00000368547 NPC2P61916 151 aa19.03■□□□□ 0.64
ECHS1-201ENST00000368547 C9orf116Q5BN46 136 aaPredicted RBP19.03■□□□□ 0.64
ECHS1-201ENST00000368547 LOC107984156A0A0G2JMH3 177 aa19.03■□□□□ 0.64
ECHS1-201ENST00000368547 TAX1BP3O14907 124 aa19.03■□□□□ 0.64
ECHS1-201ENST00000368547 EIF4EBP3O60516 100 aaPredicted RBP19.03■□□□□ 0.64
ECHS1-201ENST00000368547 ARL17AQ8IVW1 177 aa19.03■□□□□ 0.64
ECHS1-201ENST00000368547 A0A0B4J2C4 111 aa19.02■□□□□ 0.64
ECHS1-201ENST00000368547 CFC1BP0CG36 223 aa19.02■□□□□ 0.64
ECHS1-201ENST00000368547 CFC1P0CG37 223 aa19.02■□□□□ 0.64
ECHS1-201ENST00000368547 SDIM1Q6ZPB5 146 aa19■□□□□ 0.63
ECHS1-201ENST00000368547 K7ERJ3 54 aa19■□□□□ 0.63
ECHS1-201ENST00000368547 KRTAP10-1P60331 282 aa18.98■□□□□ 0.63
ECHS1-201ENST00000368547 LOC107984640A0A0U1RRK4 108 aa18.96■□□□□ 0.63
ECHS1-201ENST00000368547 RPL18AQ02543 176 aaKnown RBP18.94■□□□□ 0.62
ECHS1-201ENST00000368547 RAB37Q96AX2 223 aa18.94■□□□□ 0.62
ECHS1-201ENST00000368547 SND1-IT1Q9HBX3 110 aa18.94■□□□□ 0.62
ECHS1-201ENST00000368547 TLX1NBP0CAT3 122 aa18.93■□□□□ 0.62
ECHS1-201ENST00000368547 PRO1854Q9UHT4 67 aa18.93■□□□□ 0.62
ECHS1-201ENST00000368547 PKIGQ9Y2B9 76 aa18.93■□□□□ 0.62
ECHS1-201ENST00000368547 C9orf118A6NHY6 69 aa18.92■□□□□ 0.62
ECHS1-201ENST00000368547 NDUFC2-KCTD14E9PQ53 114 aa18.92■□□□□ 0.62
ECHS1-201ENST00000368547 Q6ZRP5 223 aa18.92■□□□□ 0.62
ECHS1-201ENST00000368547 A0A096LNI7 61 aa18.91■□□□□ 0.62
ECHS1-201ENST00000368547 GAGE2BQ13066 116 aa18.9■□□□□ 0.62
ECHS1-201ENST00000368547 IGKV2-24A0A0C4DH68 120 aa18.89■□□□□ 0.62
ECHS1-201ENST00000368547 DYNC1H1Q14204 4646 aaKnown RBP18.89■□□□□ 0.61
ECHS1-201ENST00000368547 NDUFC2O95298 119 aa18.89■□□□□ 0.61
ECHS1-201ENST00000368547 CHTF8P0CG12 524 aa18.89■□□□□ 0.61
ECHS1-201ENST00000368547 GAGE2EQ4V326 116 aa18.88■□□□□ 0.61
ECHS1-201ENST00000368547 GAGE2DQ9UEU5 116 aa18.88■□□□□ 0.61
ECHS1-201ENST00000368547 BIRC6Q9NR09 4857 aa18.87■□□□□ 0.61
ECHS1-201ENST00000368547 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP18.87■□□□□ 0.61
ECHS1-201ENST00000368547 PANO1I0J062 215 aa18.86■□□□□ 0.61
ECHS1-201ENST00000368547 FAM30AQ9NZY2 134 aa18.86■□□□□ 0.61
ECHS1-201ENST00000368547 A0A1B0GV90 55 aa18.85■□□□□ 0.61
ECHS1-201ENST00000368547 LRP1BQ9NZR2 4599 aa18.85■□□□□ 0.61
ECHS1-201ENST00000368547 Q6ZSA8 131 aa18.83■□□□□ 0.61
ECHS1-201ENST00000368547 IGKV2-28A0A075B6P5 120 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 TRAV13-2A0A0B4J235 113 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 H3BUT2 72 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 TSPAN13O95857 204 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 IGKV2D-28P01615 120 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 LINC00474Q9P2X8 69 aa18.82■□□□□ 0.6
ECHS1-201ENST00000368547 SPACA4Q8TDM5 124 aa18.81■□□□□ 0.6
ECHS1-201ENST00000368547 XAGE1AQ9HD64 81 aa18.81■□□□□ 0.6
ECHS1-201ENST00000368547 DPH3Q96FX2 82 aa18.79■□□□□ 0.6
ECHS1-201ENST00000368547 A0A1W2PPM0 123 aa18.78■□□□□ 0.6
ECHS1-201ENST00000368547 RPL13AP40429 203 aaKnown RBP18.78■□□□□ 0.6
ECHS1-201ENST00000368547 C9orf129Q5T035 196 aaKnown RBP18.78■□□□□ 0.6
ECHS1-201ENST00000368547 DNAH8Q96JB1 4490 aa18.77■□□□□ 0.6
ECHS1-201ENST00000368547 LINC00337Q8N6G1 96 aa18.77■□□□□ 0.6
ECHS1-201ENST00000368547 NAA38Q9BRA0 125 aaKnown RBP18.75■□□□□ 0.59
ECHS1-201ENST00000368547 FABP2P12104 132 aa18.74■□□□□ 0.59
ECHS1-201ENST00000368547 HAMPP81172 84 aa18.73■□□□□ 0.59
ECHS1-201ENST00000368547 A0A087WYN8 130 aa18.72■□□□□ 0.59
ECHS1-201ENST00000368547 TRBV10-2A0A0K0K1G8 114 aa18.72■□□□□ 0.59
ECHS1-201ENST00000368547 Q1RN00 199 aa18.72■□□□□ 0.59
ECHS1-201ENST00000368547 Q8NDZ9 215 aa18.72■□□□□ 0.59
ECHS1-201ENST00000368547 FAM168BA1KXE4 195 aa18.71■□□□□ 0.58
ECHS1-201ENST00000368547 H7C2G1 150 aa18.71■□□□□ 0.58
ECHS1-201ENST00000368547 SCXQ7RTU7 201 aa18.71■□□□□ 0.58
ECHS1-201ENST00000368547 LYRM7Q5U5X0 104 aa18.7■□□□□ 0.58
ECHS1-201ENST00000368547 CIRBP-AS1Q8TBR5 109 aa18.7■□□□□ 0.58
ECHS1-201ENST00000368547 A0A1W2PNN7 141 aa18.69■□□□□ 0.58
ECHS1-201ENST00000368547 VAMP3Q15836 100 aa18.69■□□□□ 0.58
ECHS1-201ENST00000368547 PLA2G2DQ9UNK4 145 aa18.69■□□□□ 0.58
ECHS1-201ENST00000368547 VPREB1P12018 145 aa18.68■□□□□ 0.58
ECHS1-201ENST00000368547 XGP55808 180 aa18.68■□□□□ 0.58
ECHS1-201ENST00000368547 PRR3P79522 188 aaKnown RBP18.67■□□□□ 0.58
ECHS1-201ENST00000368547 PLAC8Q9NZF1 115 aa18.67■□□□□ 0.58
ECHS1-201ENST00000368547 PSMB2P49721 201 aa18.66■□□□□ 0.58
ECHS1-201ENST00000368547 TMEM126AQ9H061 195 aa18.66■□□□□ 0.58
ECHS1-201ENST00000368547 APOBP04114 4563 aaKnown RBP18.65■□□□□ 0.58
ECHS1-201ENST00000368547 FAM19A5Q7Z5A7 132 aaPredicted RBP18.65■□□□□ 0.58
ECHS1-201ENST00000368547 NCR3O14931 201 aa18.64■□□□□ 0.57
ECHS1-201ENST00000368547 SERTAD4-AS1Q5TG53 156 aa18.64■□□□□ 0.57
ECHS1-201ENST00000368547 KRTAP7-1Q8IUC3 87 aa18.64■□□□□ 0.57
ECHS1-201ENST00000368547 OR13C6PQ8NH95 151 aa18.64■□□□□ 0.57
ECHS1-201ENST00000368547 TRIAP1O43715 76 aa18.63■□□□□ 0.57
ECHS1-201ENST00000368547 RPL28P46779 137 aaKnown RBP18.63■□□□□ 0.57
ECHS1-201ENST00000368547 CDK2AP2O75956 126 aa18.62■□□□□ 0.57
ECHS1-201ENST00000368547 COX6CP09669 75 aa18.62■□□□□ 0.57
ECHS1-201ENST00000368547 SPCS1Q9Y6A9 102 aa18.62■□□□□ 0.57
ECHS1-201ENST00000368547 K7EP34 96 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 GTF2H5Q6ZYL4 71 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 IGLV5-37A0A075B6J1 123 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 EPM2AB3EWF7 344 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 M0R378 163 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 IGLV6-57P01721 117 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 S100A7L2Q5SY68 101 aa18.6■□□□□ 0.57
ECHS1-201ENST00000368547 GAGE10A6NGK3 116 aa18.59■□□□□ 0.57
ECHS1-201ENST00000368547 SCGB1C2P0DMR2 95 aa18.59■□□□□ 0.57
ECHS1-201ENST00000368547 SMIM11BQ8TCY0 68 aa18.58■□□□□ 0.56
ECHS1-201ENST00000368547 TRBV20-1A0A075B6N2 111 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms