RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 KRTAP10-11P60412 298 aa12.19□□□□□ -0.46
UBQLN4-201ENST00000368309 IMUPQ9GZP8 106 aa12.19□□□□□ -0.46
UBQLN4-201ENST00000368309 WFDC10BQ8IUB3 73 aa12.19□□□□□ -0.46
UBQLN4-201ENST00000368309 SS18L2Q9UHA2 77 aa12.19□□□□□ -0.46
UBQLN4-201ENST00000368309 WIPF1O43516 503 aa12.18□□□□□ -0.46
UBQLN4-201ENST00000368309 RPL18AQ02543 176 aaKnown RBP12.18□□□□□ -0.46
UBQLN4-201ENST00000368309 TENM3Q9P273 2699 aa12.18□□□□□ -0.46
UBQLN4-201ENST00000368309 XAGE1AQ9HD64 81 aa12.18□□□□□ -0.46
UBQLN4-201ENST00000368309 KPRPQ5T749 579 aaPredicted RBP12.17□□□□□ -0.46
UBQLN4-201ENST00000368309 ANK2Q01484 3957 aa12.17□□□□□ -0.46
UBQLN4-201ENST00000368309 A0A0J9YWU9 116 aa12.17□□□□□ -0.46
UBQLN4-201ENST00000368309 Q6ZTC4 211 aa12.17□□□□□ -0.46
UBQLN4-201ENST00000368309 HIGD2BQ4VC39 106 aa12.15□□□□□ -0.46
UBQLN4-201ENST00000368309 LINC00167Q96N53 147 aa12.15□□□□□ -0.46
UBQLN4-201ENST00000368309 IGKV3D-7A0A0C4DH55 119 aa12.15□□□□□ -0.46
UBQLN4-201ENST00000368309 C6orf48Q9UBA6 75 aa12.15□□□□□ -0.46
UBQLN4-201ENST00000368309 A0A1B0GX51 115 aa12.13□□□□□ -0.47
UBQLN4-201ENST00000368309 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
UBQLN4-201ENST00000368309 FBN1P35555 2871 aaKnown RBP12.13□□□□□ -0.47
UBQLN4-201ENST00000368309 NOTCH1P46531 2555 aa12.12□□□□□ -0.47
UBQLN4-201ENST00000368309 LINC00575Q6W349 94 aa12.12□□□□□ -0.47
UBQLN4-201ENST00000368309 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
UBQLN4-201ENST00000368309 MAST4O15021 2626 aa12.1□□□□□ -0.47
UBQLN4-201ENST00000368309 CCKP06307 115 aa12.1□□□□□ -0.47
UBQLN4-201ENST00000368309 ZNF561-AS1K7EIQ3 104 aa12.1□□□□□ -0.47
UBQLN4-201ENST00000368309 IGLV6-57P01721 117 aa12.09□□□□□ -0.47
UBQLN4-201ENST00000368309 ESRGQ1W209 222 aa12.09□□□□□ -0.47
UBQLN4-201ENST00000368309 TRBV10-3A0A0K0K1G6 114 aa12.09□□□□□ -0.47
UBQLN4-201ENST00000368309 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
UBQLN4-201ENST00000368309 JMJD7-PLA2G4BH0Y9G9 81 aa12.09□□□□□ -0.47
UBQLN4-201ENST00000368309 CAMK2N2Q96S95 79 aa12.08□□□□□ -0.48
UBQLN4-201ENST00000368309 GVQW2A0A096LPI5 108 aaPredicted RBP12.07□□□□□ -0.48
UBQLN4-201ENST00000368309 MUC7Q8TAX7 377 aa12.06□□□□□ -0.48
UBQLN4-201ENST00000368309 A0A087WVE0 104 aa12.05□□□□□ -0.48
UBQLN4-201ENST00000368309 KRTAP26-1Q6PEX3 210 aa12.05□□□□□ -0.48
UBQLN4-201ENST00000368309 KRTAP24-1Q3LI83 254 aa12.05□□□□□ -0.48
UBQLN4-201ENST00000368309 Q6ZRU5 148 aa12.04□□□□□ -0.48
UBQLN4-201ENST00000368309 H3BNG1 76 aa12.04□□□□□ -0.48
UBQLN4-201ENST00000368309 Q6ZQY7 126 aa12.04□□□□□ -0.48
UBQLN4-201ENST00000368309 LAMTOR3Q9UHA4 124 aa12.04□□□□□ -0.48
UBQLN4-201ENST00000368309 Q6JHZ5 121 aa12.03□□□□□ -0.48
UBQLN4-201ENST00000368309 TRAV23DV6A0A075B6W5 121 aa12.03□□□□□ -0.48
UBQLN4-201ENST00000368309 C15orf56Q8N910 161 aa12.02□□□□□ -0.49
UBQLN4-201ENST00000368309 DEFB131BA0A096LNP1 70 aa12.02□□□□□ -0.49
UBQLN4-201ENST00000368309 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
UBQLN4-201ENST00000368309 RBM3P98179 157 aaKnown RBP12□□□□□ -0.49
UBQLN4-201ENST00000368309 DIRC1Q969H9 104 aa12□□□□□ -0.49
UBQLN4-201ENST00000368309 C11orf45Q8TAV5 145 aa12□□□□□ -0.49
UBQLN4-201ENST00000368309 C1orf43Q9BWL3 253 aa12□□□□□ -0.49
UBQLN4-201ENST00000368309 ZNF73O43830 326 aaPredicted RBP11.99□□□□□ -0.49
UBQLN4-201ENST00000368309 HIST1H4AP62805 103 aaKnown RBP11.99□□□□□ -0.49
UBQLN4-201ENST00000368309 EGFEM1PQ0D2K5 195 aa11.99□□□□□ -0.49
UBQLN4-201ENST00000368309 VPREB1P12018 145 aa11.98□□□□□ -0.49
UBQLN4-201ENST00000368309 C3orf22Q8N5N4 141 aa11.98□□□□□ -0.49
UBQLN4-201ENST00000368309 M0R2N4 97 aa11.97□□□□□ -0.49
UBQLN4-201ENST00000368309 COL6A5A8TX70 2615 aa11.97□□□□□ -0.49
UBQLN4-201ENST00000368309 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
UBQLN4-201ENST00000368309 C9orf153Q5TBE3 101 aa11.97□□□□□ -0.49
UBQLN4-201ENST00000368309 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.49
UBQLN4-201ENST00000368309 Q6ZQT0 140 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 NDUFC2-KCTD14E9PQ53 114 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 COX7BP24311 80 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 UQCRQO14949 82 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 Q6ZRP5 223 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 NBEAL1Q6ZS30 2694 aa11.95□□□□□ -0.5
UBQLN4-201ENST00000368309 ATOX1O00244 68 aa11.94□□□□□ -0.5
UBQLN4-201ENST00000368309 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
UBQLN4-201ENST00000368309 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
UBQLN4-201ENST00000368309 UBL5Q9BZL1 73 aa11.93□□□□□ -0.5
UBQLN4-201ENST00000368309 FAM19A1Q7Z5A9 133 aa11.93□□□□□ -0.5
UBQLN4-201ENST00000368309 M0R378 163 aa11.92□□□□□ -0.5
UBQLN4-201ENST00000368309 DSCR8Q96T75 97 aa11.92□□□□□ -0.5
UBQLN4-201ENST00000368309 COX7CP15954 63 aa11.92□□□□□ -0.5
UBQLN4-201ENST00000368309 ELOF1P60002 83 aaKnown RBP11.91□□□□□ -0.5
UBQLN4-201ENST00000368309 USP17L23D6RBM5 183 aa11.91□□□□□ -0.5
UBQLN4-201ENST00000368309 SYCNQ0VAF6 134 aa11.9□□□□□ -0.5
UBQLN4-201ENST00000368309 LOC110117498A0A087WWA1 95 aa11.89□□□□□ -0.51
UBQLN4-201ENST00000368309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.88□□□□□ -0.51
UBQLN4-201ENST00000368309 MRAPQ8TCY5 172 aa11.87□□□□□ -0.51
UBQLN4-201ENST00000368309 SMIM20Q8N5G0 67 aa11.87□□□□□ -0.51
UBQLN4-201ENST00000368309 HAMPP81172 84 aa11.85□□□□□ -0.51
UBQLN4-201ENST00000368309 CASC10Q5T4H9 136 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 DNAH10OSP0CZ25 163 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 SERTAD4-AS1Q5TG53 156 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 ATP5EP2Q5VTU8 51 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 LINC00528Q8N1L1 170 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
UBQLN4-201ENST00000368309 UPK3BQ9BT76 320 aa11.83□□□□□ -0.52
UBQLN4-201ENST00000368309 CYSTM1Q9H1C7 97 aa11.83□□□□□ -0.52
UBQLN4-201ENST00000368309 TRBV7-6A0A0J9YX20 115 aa11.83□□□□□ -0.52
UBQLN4-201ENST00000368309 Q6ZVQ6 151 aa11.83□□□□□ -0.52
UBQLN4-201ENST00000368309 SERP2Q8N6R1 65 aa11.83□□□□□ -0.52
UBQLN4-201ENST00000368309 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
UBQLN4-201ENST00000368309 NKAPP1Q8N9T2 125 aa11.82□□□□□ -0.52
UBQLN4-201ENST00000368309 H3BQ85 93 aa11.81□□□□□ -0.52
UBQLN4-201ENST00000368309 LINC01547P58512 204 aaPredicted RBP11.81□□□□□ -0.52
UBQLN4-201ENST00000368309 MGAM2Q2M2H8 2515 aa11.81□□□□□ -0.52
UBQLN4-201ENST00000368309 CRYGAP11844 174 aa11.8□□□□□ -0.52
UBQLN4-201ENST00000368309 TRAV10A0A0B4J240 114 aa11.79□□□□□ -0.52
UBQLN4-201ENST00000368309 TRBV7-4A0A0J9YYF1 115 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms