RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 C10orf25Q5T742 122 aa8.48□□□□□ -1.05
PTPRK-203ENST00000368207 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
PTPRK-203ENST00000368207 C1orf137Q5JT78 98 aa8.47□□□□□ -1.05
PTPRK-203ENST00000368207 SOSTDC1Q6X4U4 206 aa8.47□□□□□ -1.05
PTPRK-203ENST00000368207 DNAH14Q0VDD8 3507 aa8.47□□□□□ -1.05
PTPRK-203ENST00000368207 MRPL55Q7Z7F7 128 aaKnown RBP8.47□□□□□ -1.05
PTPRK-203ENST00000368207 IGLV5-52A0A0A0MRZ9 124 aa8.46□□□□□ -1.05
PTPRK-203ENST00000368207 ZNF706Q9Y5V0 76 aaPredicted RBP8.46□□□□□ -1.05
PTPRK-203ENST00000368207 IMUPQ9GZP8 106 aa8.46□□□□□ -1.06
PTPRK-203ENST00000368207 KRTAP1-3Q8IUG1 177 aa8.46□□□□□ -1.06
PTPRK-203ENST00000368207 STAB1Q9NY15 2570 aa8.45□□□□□ -1.06
PTPRK-203ENST00000368207 A0A087WVE0 104 aa8.45□□□□□ -1.06
PTPRK-203ENST00000368207 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
PTPRK-203ENST00000368207 LINC00575Q6W349 94 aa8.45□□□□□ -1.06
PTPRK-203ENST00000368207 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
PTPRK-203ENST00000368207 J3KT08 172 aa8.44□□□□□ -1.06
PTPRK-203ENST00000368207 NHLRC4P0CG21 123 aaPredicted RBP8.44□□□□□ -1.06
PTPRK-203ENST00000368207 C3orf22Q8N5N4 141 aa8.44□□□□□ -1.06
PTPRK-203ENST00000368207 CSNK1G2-AS1Q8NCQ2 148 aa8.44□□□□□ -1.06
PTPRK-203ENST00000368207 FRYLO94915 3013 aa8.44□□□□□ -1.06
PTPRK-203ENST00000368207 PRLHP81277 87 aa8.44□□□□□ -1.06
PTPRK-203ENST00000368207 C1orf134Q5TEV5 83 aa8.43□□□□□ -1.06
PTPRK-203ENST00000368207 Q6JHZ5 121 aa8.43□□□□□ -1.06
PTPRK-203ENST00000368207 KRTAP10-3P60369 221 aa8.43□□□□□ -1.06
PTPRK-203ENST00000368207 MDFIQ99750 246 aa8.43□□□□□ -1.06
PTPRK-203ENST00000368207 SNURFQ9Y675 71 aa8.43□□□□□ -1.06
PTPRK-203ENST00000368207 F8WDY8 70 aa8.42□□□□□ -1.06
PTPRK-203ENST00000368207 SERP2Q8N6R1 65 aa8.42□□□□□ -1.06
PTPRK-203ENST00000368207 C22orf24Q9Y442 160 aa8.42□□□□□ -1.06
PTPRK-203ENST00000368207 FAM19A3Q7Z5A8 133 aa8.41□□□□□ -1.06
PTPRK-203ENST00000368207 H3BNG1 76 aa8.41□□□□□ -1.06
PTPRK-203ENST00000368207 COL6A5A8TX70 2615 aa8.41□□□□□ -1.06
PTPRK-203ENST00000368207 GIG44P09565 113 aaPredicted RBP8.41□□□□□ -1.06
PTPRK-203ENST00000368207 UNC79Q9P2D8 2635 aa8.41□□□□□ -1.06
PTPRK-203ENST00000368207 C19orf73Q9NVV2 129 aa8.41□□□□□ -1.06
PTPRK-203ENST00000368207 CCDC179H3BU77 68 aa8.4□□□□□ -1.06
PTPRK-203ENST00000368207 PRYO14603 147 aa8.4□□□□□ -1.07
PTPRK-203ENST00000368207 FREM2Q5SZK8 3169 aa8.4□□□□□ -1.07
PTPRK-203ENST00000368207 FLNCQ14315 2725 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 SPEGQ15772 3267 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-203ENST00000368207 Q9BRP9 147 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 LINC00846Q9NV44 126 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 LINC00588Q9Y4M8 146 aa8.39□□□□□ -1.07
PTPRK-203ENST00000368207 PRR4Q16378 134 aa8.38□□□□□ -1.07
PTPRK-203ENST00000368207 FAM218AQ96MZ4 157 aa8.38□□□□□ -1.07
PTPRK-203ENST00000368207 FAM236DA0A1B0GTK5 79 aa8.38□□□□□ -1.07
PTPRK-203ENST00000368207 FAM236CP0DP71 79 aa8.38□□□□□ -1.07
PTPRK-203ENST00000368207 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
PTPRK-203ENST00000368207 NOTCH1P46531 2555 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 A0A087WSZ3 146 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 NBEAQ8NFP9 2946 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 COX7CP15954 63 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 LINC00167Q96N53 147 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 FAM30AQ9NZY2 134 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 ATMQ13315 3056 aa8.37□□□□□ -1.07
PTPRK-203ENST00000368207 KRTAP10-11P60412 298 aa8.36□□□□□ -1.07
PTPRK-203ENST00000368207 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
PTPRK-203ENST00000368207 SMCR5Q8TEV8 140 aa8.35□□□□□ -1.07
PTPRK-203ENST00000368207 Q6Q795 121 aa8.34□□□□□ -1.07
PTPRK-203ENST00000368207 LITAFQ99732 161 aa8.34□□□□□ -1.07
PTPRK-203ENST00000368207 UBR5O95071 2799 aaPredicted RBP8.34□□□□□ -1.07
PTPRK-203ENST00000368207 Q6ZVQ6 151 aa8.33□□□□□ -1.08
PTPRK-203ENST00000368207 PRO0461Q9UI25 63 aa8.33□□□□□ -1.08
PTPRK-203ENST00000368207 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
PTPRK-203ENST00000368207 KIAA0087Q14695 138 aa8.33□□□□□ -1.08
PTPRK-203ENST00000368207 MPLKIPQ8TAP9 179 aa8.33□□□□□ -1.08
PTPRK-203ENST00000368207 CDIP1Q9H305 208 aa8.32□□□□□ -1.08
PTPRK-203ENST00000368207 EIF4EBP3O60516 100 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-203ENST00000368207 K7EIL1 84 aa8.32□□□□□ -1.08
PTPRK-203ENST00000368207 CASC2Q6XLA1 102 aa8.31□□□□□ -1.08
PTPRK-203ENST00000368207 REV3LO60673 3130 aa8.31□□□□□ -1.08
PTPRK-203ENST00000368207 DMXL2Q8TDJ6 3036 aa8.31□□□□□ -1.08
PTPRK-203ENST00000368207 ADGRG4Q8IZF6 3080 aa8.3□□□□□ -1.08
PTPRK-203ENST00000368207 COL12A1Q99715 3063 aa8.3□□□□□ -1.08
PTPRK-203ENST00000368207 LINC01547P58512 204 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-203ENST00000368207 TACC2O95359 2948 aa8.3□□□□□ -1.08
PTPRK-203ENST00000368207 Q8N9L7 120 aa8.29□□□□□ -1.08
PTPRK-203ENST00000368207 NBDYA0A0U1RRE5 68 aa8.29□□□□□ -1.08
PTPRK-203ENST00000368207 IGHV6-1A0A0B4J1U7 121 aa8.29□□□□□ -1.08
PTPRK-203ENST00000368207 Q6ZRP5 223 aa8.28□□□□□ -1.08
PTPRK-203ENST00000368207 SPATA3Q8NHX4 192 aa8.28□□□□□ -1.08
PTPRK-203ENST00000368207 TRAV7A0A075B6U4 112 aa8.27□□□□□ -1.08
PTPRK-203ENST00000368207 CHTF8P0CG12 524 aa8.27□□□□□ -1.08
PTPRK-203ENST00000368207 DNAH10OSP0CZ25 163 aa8.27□□□□□ -1.08
PTPRK-203ENST00000368207 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.08
PTPRK-203ENST00000368207 LINC00208Q96KT6 92 aa8.27□□□□□ -1.09
PTPRK-203ENST00000368207 BAHCC1Q9P281 2608 aa8.27□□□□□ -1.09
PTPRK-203ENST00000368207 GVQW2A0A096LPI5 108 aaPredicted RBP8.26□□□□□ -1.09
PTPRK-203ENST00000368207 NDUFC1O43677 76 aa8.26□□□□□ -1.09
PTPRK-203ENST00000368207 ELOF1P60002 83 aaKnown RBP8.26□□□□□ -1.09
PTPRK-203ENST00000368207 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
PTPRK-203ENST00000368207 LINC00612Q8N6U2 182 aa8.25□□□□□ -1.09
PTPRK-203ENST00000368207 KALRNO60229 2985 aa8.24□□□□□ -1.09
PTPRK-203ENST00000368207 SPTBN5Q9NRC6 3674 aaKnown RBP8.24□□□□□ -1.09
PTPRK-203ENST00000368207 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
PTPRK-203ENST00000368207 BRK1Q8WUW1 75 aa8.23□□□□□ -1.09
PTPRK-203ENST00000368207 FAM168BA1KXE4 195 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms