RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 Q9HAA7 133 aa7.96□□□□□ -1.14
USF1-201ENST00000368019 RETNQ9HD89 108 aa7.96□□□□□ -1.14
USF1-201ENST00000368019 ALMS1Q8TCU4 4167 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 TRBV10-3A0A0K0K1G6 114 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 J3KT08 172 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 GIG44P09565 113 aaPredicted RBP7.95□□□□□ -1.14
USF1-201ENST00000368019 COX17Q14061 63 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 FHL2Q14192 279 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 SERP2Q8N6R1 65 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 KIR2DL5BQ8NHK3 375 aa7.95□□□□□ -1.14
USF1-201ENST00000368019 LINC00959A0A1B0GUT2 108 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 LECT2O14960 151 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 CCKP06307 115 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 TMEM258P61165 79 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 CSNK1G2-AS1Q8NCQ2 148 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 TOMM7Q9P0U1 55 aa7.94□□□□□ -1.14
USF1-201ENST00000368019 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
USF1-201ENST00000368019 BCE1O60756 84 aa7.93□□□□□ -1.14
USF1-201ENST00000368019 SS18Q15532 418 aa7.93□□□□□ -1.14
USF1-201ENST00000368019 C14orf132Q9NPU4 83 aa7.93□□□□□ -1.14
USF1-201ENST00000368019 H3BQ85 93 aa7.92□□□□□ -1.14
USF1-201ENST00000368019 TMEM256-PLSCR3K7ERE1 68 aa7.92□□□□□ -1.14
USF1-201ENST00000368019 PAX4O43316 350 aa7.92□□□□□ -1.14
USF1-201ENST00000368019 LYPD5Q6UWN5 251 aa7.92□□□□□ -1.14
USF1-201ENST00000368019 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
USF1-201ENST00000368019 NDUFC2-KCTD14E9PQ53 114 aa7.91□□□□□ -1.14
USF1-201ENST00000368019 CFAP161Q6P656 301 aa7.91□□□□□ -1.14
USF1-201ENST00000368019 WFDC10AQ9H1F0 79 aa7.91□□□□□ -1.14
USF1-201ENST00000368019 IGHV4-28A0A0C4DH34 117 aa7.9□□□□□ -1.14
USF1-201ENST00000368019 LOC100131303A0A0U1RQF7 123 aa7.9□□□□□ -1.14
USF1-201ENST00000368019 hADV29S1A0JD25 119 aa7.9□□□□□ -1.14
USF1-201ENST00000368019 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.14
USF1-201ENST00000368019 UPK3BQ9BT76 320 aa7.9□□□□□ -1.14
USF1-201ENST00000368019 Q8N814 137 aa7.89□□□□□ -1.15
USF1-201ENST00000368019 FRAS1Q86XX4 4008 aa7.88□□□□□ -1.15
USF1-201ENST00000368019 SMIM9A6NGZ8 99 aa7.88□□□□□ -1.15
USF1-201ENST00000368019 USP17L23D6RBM5 183 aa7.88□□□□□ -1.15
USF1-201ENST00000368019 OR13C6PQ8NH95 151 aa7.88□□□□□ -1.15
USF1-201ENST00000368019 PFN2P35080 140 aa7.87□□□□□ -1.15
USF1-201ENST00000368019 C9orf129Q5T035 196 aaKnown RBP7.87□□□□□ -1.15
USF1-201ENST00000368019 LINC00476Q8WZB0 136 aa7.87□□□□□ -1.15
USF1-201ENST00000368019 NANOS2P60321 138 aaKnown RBP7.86□□□□□ -1.15
USF1-201ENST00000368019 CD164L2Q6UWJ8 174 aa7.86□□□□□ -1.15
USF1-201ENST00000368019 IGKV3D-7A0A0C4DH55 119 aa7.85□□□□□ -1.15
USF1-201ENST00000368019 NCR3O14931 201 aa7.85□□□□□ -1.15
USF1-201ENST00000368019 PDE6GP18545 87 aa7.85□□□□□ -1.15
USF1-201ENST00000368019 KIAA0087Q14695 138 aa7.85□□□□□ -1.15
USF1-201ENST00000368019 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
USF1-201ENST00000368019 IGKV3OR2-268A0A0C4DH90 116 aa7.84□□□□□ -1.15
USF1-201ENST00000368019 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
USF1-201ENST00000368019 PRO0255Q9UI72 69 aa7.84□□□□□ -1.15
USF1-201ENST00000368019 KMT2AQ03164 3969 aa7.84□□□□□ -1.15
USF1-201ENST00000368019 LYRM9A8MSI8 78 aa7.83□□□□□ -1.16
USF1-201ENST00000368019 GYPEP15421 78 aa7.83□□□□□ -1.16
USF1-201ENST00000368019 RPL35AP18077 110 aaKnown RBP7.83□□□□□ -1.16
USF1-201ENST00000368019 UBL5Q9BZL1 73 aa7.83□□□□□ -1.16
USF1-201ENST00000368019 ZNF561-AS1K7EIQ3 104 aa7.82□□□□□ -1.16
USF1-201ENST00000368019 GHRHP01286 108 aa7.82□□□□□ -1.16
USF1-201ENST00000368019 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
USF1-201ENST00000368019 C6orf223Q8N319 242 aa7.82□□□□□ -1.16
USF1-201ENST00000368019 DNAH10Q8IVF4 4471 aa7.82□□□□□ -1.16
USF1-201ENST00000368019 A0A0J9YWU9 116 aa7.81□□□□□ -1.16
USF1-201ENST00000368019 LY6G6CO95867 125 aa7.81□□□□□ -1.16
USF1-201ENST00000368019 XCL1P47992 114 aa7.81□□□□□ -1.16
USF1-201ENST00000368019 C5orf47Q569G3 176 aa7.81□□□□□ -1.16
USF1-201ENST00000368019 NUPR2A6NF83 97 aa7.8□□□□□ -1.16
USF1-201ENST00000368019 SLPIP03973 132 aa7.8□□□□□ -1.16
USF1-201ENST00000368019 DPH3Q96FX2 82 aa7.8□□□□□ -1.16
USF1-201ENST00000368019 VPS13DQ5THJ4 4388 aa7.79□□□□□ -1.16
USF1-201ENST00000368019 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
USF1-201ENST00000368019 Q6ZQT0 140 aa7.79□□□□□ -1.16
USF1-201ENST00000368019 FAM19A5Q7Z5A7 132 aaPredicted RBP7.79□□□□□ -1.16
USF1-201ENST00000368019 A0A087WVE0 104 aa7.78□□□□□ -1.16
USF1-201ENST00000368019 GVQW2A0A096LPI5 108 aaPredicted RBP7.78□□□□□ -1.16
USF1-201ENST00000368019 APOC4P55056 127 aa7.78□□□□□ -1.16
USF1-201ENST00000368019 RBM3P98179 157 aaKnown RBP7.78□□□□□ -1.16
USF1-201ENST00000368019 DEFB135Q30KP9 77 aa7.78□□□□□ -1.16
USF1-201ENST00000368019 X6R8D5 127 aa7.78□□□□□ -1.16
USF1-201ENST00000368019 TRBV7-6A0A0J9YX20 115 aa7.77□□□□□ -1.17
USF1-201ENST00000368019 C6orf99Q4VX62 202 aa7.77□□□□□ -1.17
USF1-201ENST00000368019 CHCHD10Q8WYQ3 142 aaPredicted RBP7.77□□□□□ -1.17
USF1-201ENST00000368019 TRAV7A0A075B6U4 112 aa7.76□□□□□ -1.17
USF1-201ENST00000368019 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
USF1-201ENST00000368019 CXCL6P80162 114 aa7.76□□□□□ -1.17
USF1-201ENST00000368019 REG3AQ06141 175 aa7.76□□□□□ -1.17
USF1-201ENST00000368019 HERC2O95714 4834 aa7.76□□□□□ -1.17
USF1-201ENST00000368019 DEFB130BP0DP73 79 aa7.75□□□□□ -1.17
USF1-201ENST00000368019 DEFB130AP0DP74 79 aa7.75□□□□□ -1.17
USF1-201ENST00000368019 C11orf68Q9H3H3 251 aaKnown RBP7.75□□□□□ -1.17
USF1-201ENST00000368019 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.74□□□□□ -1.17
USF1-201ENST00000368019 CYSTM1Q9H1C7 97 aa7.74□□□□□ -1.17
USF1-201ENST00000368019 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
USF1-201ENST00000368019 EPM2AB3EWF7 344 aa7.73□□□□□ -1.17
USF1-201ENST00000368019 ENHOQ6UWT2 76 aa7.73□□□□□ -1.17
USF1-201ENST00000368019 LINC00269Q8N2A0 174 aa7.73□□□□□ -1.17
USF1-201ENST00000368019 HECTD4Q9Y4D8 3996 aa7.72□□□□□ -1.17
USF1-201ENST00000368019 SPAG11BQ08648 103 aa7.72□□□□□ -1.17
USF1-201ENST00000368019 KLKP1Q107X0 134 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms