RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 LYPD5Q6UWN5 251 aa8.78□□□□□ -1
TPR-201ENST00000367478 KIAA0087Q14695 138 aa8.77□□□□□ -1
TPR-201ENST00000367478 LOC110117498A0A087WWA1 95 aa8.77□□□□□ -1
TPR-201ENST00000367478 LINC00313P59037 77 aa8.77□□□□□ -1.01
TPR-201ENST00000367478 POLQO75417 2590 aa8.77□□□□□ -1.01
TPR-201ENST00000367478 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
TPR-201ENST00000367478 LINC01546A6NGU7 62 aa8.76□□□□□ -1.01
TPR-201ENST00000367478 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
TPR-201ENST00000367478 Q9UF83 564 aa8.76□□□□□ -1.01
TPR-201ENST00000367478 OXLD1Q5BKU9 147 aa8.75□□□□□ -1.01
TPR-201ENST00000367478 IGLV5-39A0A0G2JS06 123 aa8.75□□□□□ -1.01
TPR-201ENST00000367478 C16orf95Q9H693 158 aa8.75□□□□□ -1.01
TPR-201ENST00000367478 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
TPR-201ENST00000367478 ERC2-IT1O76042 136 aa8.74□□□□□ -1.01
TPR-201ENST00000367478 Q6ZRU5 148 aa8.74□□□□□ -1.01
TPR-201ENST00000367478 ANKRD11Q6UB99 2663 aaPredicted RBP8.74□□□□□ -1.01
TPR-201ENST00000367478 A8MTW9 85 aa8.74□□□□□ -1.01
TPR-201ENST00000367478 MUC22E2RYF6 1773 aaPredicted RBP8.74□□□□□ -1.01
TPR-201ENST00000367478 CRIPTQ9P021 101 aa8.74□□□□□ -1.01
TPR-201ENST00000367478 MOBPQ13875 183 aa8.73□□□□□ -1.01
TPR-201ENST00000367478 UQCR11O14957 56 aa8.73□□□□□ -1.01
TPR-201ENST00000367478 SPTBN4Q9H254 2564 aa8.72□□□□□ -1.01
TPR-201ENST00000367478 Q8NBF4 154 aa8.72□□□□□ -1.01
TPR-201ENST00000367478 WISP2O76076 250 aa8.71□□□□□ -1.01
TPR-201ENST00000367478 SSBP3-AS1Q7Z2R9 100 aa8.71□□□□□ -1.01
TPR-201ENST00000367478 SPACA4Q8TDM5 124 aa8.71□□□□□ -1.02
TPR-201ENST00000367478 A0A096LNJ9 63 aa8.71□□□□□ -1.02
TPR-201ENST00000367478 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
TPR-201ENST00000367478 ELOF1P60002 83 aaKnown RBP8.7□□□□□ -1.02
TPR-201ENST00000367478 Q6ZQT0 140 aa8.7□□□□□ -1.02
TPR-201ENST00000367478 IGHV3OR16-9A0A0B4J2B5 98 aa8.68□□□□□ -1.02
TPR-201ENST00000367478 FAM229AH3BQW9 127 aa8.68□□□□□ -1.02
TPR-201ENST00000367478 EDN2P20800 178 aa8.68□□□□□ -1.02
TPR-201ENST00000367478 CHD8Q9HCK8 2581 aa8.67□□□□□ -1.02
TPR-201ENST00000367478 LINC01600Q96MT4 127 aa8.67□□□□□ -1.02
TPR-201ENST00000367478 H3BNG1 76 aa8.66□□□□□ -1.02
TPR-201ENST00000367478 IGLV5-45A0A087WSX0 123 aa8.66□□□□□ -1.02
TPR-201ENST00000367478 TRBV7-4A0A0J9YYF1 115 aa8.66□□□□□ -1.02
TPR-201ENST00000367478 Q6ZRX8 168 aa8.66□□□□□ -1.02
TPR-201ENST00000367478 Q6ZSN1 163 aa8.66□□□□□ -1.02
TPR-201ENST00000367478 LINC00167Q96N53 147 aa8.65□□□□□ -1.02
TPR-201ENST00000367478 LINC00476Q8WZB0 136 aa8.65□□□□□ -1.03
TPR-201ENST00000367478 PCSK5Q92824 1860 aa8.65□□□□□ -1.03
TPR-201ENST00000367478 IGLV8-61A0A075B6I0 122 aa8.64□□□□□ -1.03
TPR-201ENST00000367478 USP24Q9UPU5 2620 aa8.64□□□□□ -1.03
TPR-201ENST00000367478 CD164Q04900 197 aa8.64□□□□□ -1.03
TPR-201ENST00000367478 A8MWP4 228 aa8.62□□□□□ -1.03
TPR-201ENST00000367478 FHL3Q13643 280 aa8.62□□□□□ -1.03
TPR-201ENST00000367478 TYMSOSQ8TAI1 123 aa8.62□□□□□ -1.03
TPR-201ENST00000367478 Q6ZRP5 223 aa8.61□□□□□ -1.03
TPR-201ENST00000367478 TM2D3Q9BRN9 247 aa8.61□□□□□ -1.03
TPR-201ENST00000367478 C16orf90A8MZG2 172 aa8.6□□□□□ -1.03
TPR-201ENST00000367478 COA5Q86WW8 74 aa8.59□□□□□ -1.03
TPR-201ENST00000367478 CR1P17927 2039 aa8.59□□□□□ -1.03
TPR-201ENST00000367478 MIR22HGQ0VDD5 57 aa8.59□□□□□ -1.03
TPR-201ENST00000367478 EPM2AB3EWF7 344 aa8.58□□□□□ -1.04
TPR-201ENST00000367478 PRO0461Q9UI25 63 aa8.58□□□□□ -1.04
TPR-201ENST00000367478 AVPP01185 164 aa8.57□□□□□ -1.04
TPR-201ENST00000367478 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
TPR-201ENST00000367478 SMCPP49901 116 aaPredicted RBP8.56□□□□□ -1.04
TPR-201ENST00000367478 KTN1-AS1Q86SY8 53 aa8.56□□□□□ -1.04
TPR-201ENST00000367478 Q96NJ1 140 aa8.55□□□□□ -1.04
TPR-201ENST00000367478 MRPL34Q9BQ48 92 aaKnown RBP8.55□□□□□ -1.04
TPR-201ENST00000367478 GVQW2A0A096LPI5 108 aaPredicted RBP8.54□□□□□ -1.04
TPR-201ENST00000367478 MDFIQ99750 246 aa8.54□□□□□ -1.04
TPR-201ENST00000367478 FAM218AQ96MZ4 157 aa8.54□□□□□ -1.04
TPR-201ENST00000367478 KLKP1Q107X0 134 aa8.52□□□□□ -1.04
TPR-201ENST00000367478 FAM19A4Q96LR4 140 aa8.52□□□□□ -1.05
TPR-201ENST00000367478 LCA10Q71F78 164 aa8.52□□□□□ -1.05
TPR-201ENST00000367478 IGLV6-57P01721 117 aa8.51□□□□□ -1.05
TPR-201ENST00000367478 APLNQ9ULZ1 77 aa8.5□□□□□ -1.05
TPR-201ENST00000367478 A8MUN3 132 aa8.5□□□□□ -1.05
TPR-201ENST00000367478 ST20-AS1Q8NBB2 130 aa8.5□□□□□ -1.05
TPR-201ENST00000367478 BPTFQ12830 3046 aa8.49□□□□□ -1.05
TPR-201ENST00000367478 CDC42SE1Q9NRR8 79 aa8.48□□□□□ -1.05
TPR-201ENST00000367478 FASNP49327 2511 aaKnown RBP8.47□□□□□ -1.05
TPR-201ENST00000367478 RTL8CO15255 209 aa8.47□□□□□ -1.05
TPR-201ENST00000367478 LINC00315P59091 139 aa8.47□□□□□ -1.05
TPR-201ENST00000367478 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
TPR-201ENST00000367478 K7EQZ3 153 aa8.46□□□□□ -1.06
TPR-201ENST00000367478 SMR3AQ99954 134 aa8.45□□□□□ -1.06
TPR-201ENST00000367478 RPL37AP61513 92 aaKnown RBP8.45□□□□□ -1.06
TPR-201ENST00000367478 LINC01554Q52M75 96 aa8.45□□□□□ -1.06
TPR-201ENST00000367478 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
TPR-201ENST00000367478 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
TPR-201ENST00000367478 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
TPR-201ENST00000367478 C9orf129Q5T035 196 aaKnown RBP8.42□□□□□ -1.06
TPR-201ENST00000367478 DNAH10OSP0CZ25 163 aa8.41□□□□□ -1.06
TPR-201ENST00000367478 CHTF8P0CG12 524 aa8.41□□□□□ -1.06
TPR-201ENST00000367478 COX6B2Q6YFQ2 88 aa8.41□□□□□ -1.06
TPR-201ENST00000367478 PRO3102Q9H379 93 aa8.41□□□□□ -1.06
TPR-201ENST00000367478 CDSNQ15517 529 aa8.4□□□□□ -1.06
TPR-201ENST00000367478 KCNQ1DNQ9H478 68 aa8.4□□□□□ -1.06
TPR-201ENST00000367478 A0A1B0GVX0 72 aa8.4□□□□□ -1.07
TPR-201ENST00000367478 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
TPR-201ENST00000367478 RBM12B-AS1Q9P1G2 102 aa8.38□□□□□ -1.07
TPR-201ENST00000367478 CEP295Q9C0D2 2601 aa8.37□□□□□ -1.07
TPR-201ENST00000367478 LINC00336Q6ZUF6 198 aa8.34□□□□□ -1.07
TPR-201ENST00000367478 LINC00304Q8N9R0 145 aa8.34□□□□□ -1.07
TPR-201ENST00000367478 PRRC2CQ9Y520 2896 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms