RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
SYNE1-204ENST00000367248 PRYO14603 147 aa7.98□□□□□ -1.13
SYNE1-204ENST00000367248 SMR3BP02814 79 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-204ENST00000367248 A0A087WYN8 130 aa7.97□□□□□ -1.13
SYNE1-204ENST00000367248 Q6JHZ5 121 aa7.97□□□□□ -1.13
SYNE1-204ENST00000367248 PHF5AQ7RTV0 110 aaKnown RBP7.97□□□□□ -1.13
SYNE1-204ENST00000367248 SPATA3Q8NHX4 192 aa7.96□□□□□ -1.14
SYNE1-204ENST00000367248 A0A087WSZ3 146 aa7.96□□□□□ -1.14
SYNE1-204ENST00000367248 SMCR5Q8TEV8 140 aa7.96□□□□□ -1.14
SYNE1-204ENST00000367248 SETXQ7Z333 2677 aaKnown RBP7.95□□□□□ -1.14
SYNE1-204ENST00000367248 SPINK1P00995 79 aa7.95□□□□□ -1.14
SYNE1-204ENST00000367248 IGLV5-45A0A087WSX0 123 aa7.95□□□□□ -1.14
SYNE1-204ENST00000367248 KRTAP10-3P60369 221 aa7.95□□□□□ -1.14
SYNE1-204ENST00000367248 CFAP46Q8IYW2 2715 aa7.94□□□□□ -1.14
SYNE1-204ENST00000367248 DNAH10OSP0CZ25 163 aa7.94□□□□□ -1.14
SYNE1-204ENST00000367248 MOBPQ13875 183 aa7.93□□□□□ -1.14
SYNE1-204ENST00000367248 CHD7Q9P2D1 2997 aa7.93□□□□□ -1.14
SYNE1-204ENST00000367248 KRTAP1-3Q8IUG1 177 aa7.93□□□□□ -1.14
SYNE1-204ENST00000367248 UQCRQO14949 82 aa7.93□□□□□ -1.14
SYNE1-204ENST00000367248 LINC00575Q6W349 94 aa7.92□□□□□ -1.14
SYNE1-204ENST00000367248 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
SYNE1-204ENST00000367248 C6orf48Q9UBA6 75 aa7.92□□□□□ -1.14
SYNE1-204ENST00000367248 CENPEQ02224 2701 aa7.91□□□□□ -1.14
SYNE1-204ENST00000367248 Q8N9L7 120 aa7.91□□□□□ -1.14
SYNE1-204ENST00000367248 FLNAP21333 2647 aaKnown RBP7.91□□□□□ -1.14
SYNE1-204ENST00000367248 SNURFQ9Y675 71 aa7.91□□□□□ -1.14
SYNE1-204ENST00000367248 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
SYNE1-204ENST00000367248 KRTAP1-1Q07627 177 aa7.9□□□□□ -1.14
SYNE1-204ENST00000367248 MPLKIPQ8TAP9 179 aa7.9□□□□□ -1.14
SYNE1-204ENST00000367248 J3KT08 172 aa7.9□□□□□ -1.14
SYNE1-204ENST00000367248 LINC00167Q96N53 147 aa7.9□□□□□ -1.14
SYNE1-204ENST00000367248 PRUNE2Q8WUY3 3088 aa7.9□□□□□ -1.15
SYNE1-204ENST00000367248 CSNK1G2-AS1Q8NCQ2 148 aa7.89□□□□□ -1.15
SYNE1-204ENST00000367248 TYMSOSQ8TAI1 123 aa7.89□□□□□ -1.15
SYNE1-204ENST00000367248 PLA2G1BP04054 148 aaKnown RBP7.89□□□□□ -1.15
SYNE1-204ENST00000367248 ITPR3Q14573 2671 aa7.89□□□□□ -1.15
SYNE1-204ENST00000367248 LIMD2Q9BT23 127 aa7.89□□□□□ -1.15
SYNE1-204ENST00000367248 TEP1Q99973 2627 aaKnown RBP7.88□□□□□ -1.15
SYNE1-204ENST00000367248 LINC01547P58512 204 aaPredicted RBP7.88□□□□□ -1.15
SYNE1-204ENST00000367248 C19orf73Q9NVV2 129 aa7.88□□□□□ -1.15
SYNE1-204ENST00000367248 SERP2Q8N6R1 65 aa7.88□□□□□ -1.15
SYNE1-204ENST00000367248 RPL37AP61513 92 aaKnown RBP7.88□□□□□ -1.15
SYNE1-204ENST00000367248 SERP1Q9Y6X1 66 aa7.87□□□□□ -1.15
SYNE1-204ENST00000367248 SPTSSBQ8NFR3 76 aa7.87□□□□□ -1.15
SYNE1-204ENST00000367248 PCOTHQ58A44 107 aa7.86□□□□□ -1.15
SYNE1-204ENST00000367248 CHD9Q3L8U1 2897 aa7.86□□□□□ -1.15
SYNE1-204ENST00000367248 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
SYNE1-204ENST00000367248 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
SYNE1-204ENST00000367248 Q6ZRP5 223 aa7.85□□□□□ -1.15
SYNE1-204ENST00000367248 K7ERS5 55 aa7.85□□□□□ -1.15
SYNE1-204ENST00000367248 CRYGAP11844 174 aa7.84□□□□□ -1.15
SYNE1-204ENST00000367248 GIG44P09565 113 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-204ENST00000367248 SOSTDC1Q6X4U4 206 aa7.84□□□□□ -1.15
SYNE1-204ENST00000367248 LINC00208Q96KT6 92 aa7.83□□□□□ -1.16
SYNE1-204ENST00000367248 GVQW2A0A096LPI5 108 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-204ENST00000367248 STAB1Q9NY15 2570 aa7.82□□□□□ -1.16
SYNE1-204ENST00000367248 A0A087WVE0 104 aa7.82□□□□□ -1.16
SYNE1-204ENST00000367248 SVIPQ8NHG7 77 aa7.82□□□□□ -1.16
SYNE1-204ENST00000367248 ZNF292O60281 2723 aa7.82□□□□□ -1.16
SYNE1-204ENST00000367248 KIAA0087Q14695 138 aa7.81□□□□□ -1.16
SYNE1-204ENST00000367248 FAM168BA1KXE4 195 aa7.8□□□□□ -1.16
SYNE1-204ENST00000367248 HTTP42858 3142 aa7.8□□□□□ -1.16
SYNE1-204ENST00000367248 EPM2AB3EWF7 344 aa7.8□□□□□ -1.16
SYNE1-204ENST00000367248 NDUFC1O43677 76 aa7.8□□□□□ -1.16
SYNE1-204ENST00000367248 LINC00612Q8N6U2 182 aa7.79□□□□□ -1.16
SYNE1-204ENST00000367248 COX7CP15954 63 aa7.79□□□□□ -1.16
SYNE1-204ENST00000367248 HCG22E2RYF7 251 aa7.78□□□□□ -1.16
SYNE1-204ENST00000367248 COX6B2Q6YFQ2 88 aa7.78□□□□□ -1.16
SYNE1-204ENST00000367248 LINC00846Q9NV44 126 aa7.77□□□□□ -1.17
SYNE1-204ENST00000367248 XIRP2A4UGR9 3374 aa7.77□□□□□ -1.17
SYNE1-204ENST00000367248 TRBV7-6A0A0J9YX20 115 aa7.77□□□□□ -1.17
SYNE1-204ENST00000367248 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
SYNE1-204ENST00000367248 Q6ZRX8 168 aa7.76□□□□□ -1.17
SYNE1-204ENST00000367248 ST20-AS1Q8NBB2 130 aa7.76□□□□□ -1.17
SYNE1-204ENST00000367248 TM2D3Q9BRN9 247 aa7.75□□□□□ -1.17
SYNE1-204ENST00000367248 BRK1Q8WUW1 75 aa7.74□□□□□ -1.17
SYNE1-204ENST00000367248 PRR15LQ9BU68 103 aa7.74□□□□□ -1.17
SYNE1-204ENST00000367248 CDIP1Q9H305 208 aa7.74□□□□□ -1.17
SYNE1-204ENST00000367248 TRAV7A0A075B6U4 112 aa7.74□□□□□ -1.17
SYNE1-204ENST00000367248 PRR34Q9NV39 138 aa7.74□□□□□ -1.17
SYNE1-204ENST00000367248 ATP5EP56381 51 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-204ENST00000367248 MGAQ8IWI9 3026 aa7.73□□□□□ -1.17
SYNE1-204ENST00000367248 FAM218AQ96MZ4 157 aa7.73□□□□□ -1.17
SYNE1-204ENST00000367248 WDFY4Q6ZS81 3184 aa7.73□□□□□ -1.17
SYNE1-204ENST00000367248 VPREB1P12018 145 aa7.72□□□□□ -1.17
SYNE1-204ENST00000367248 LITAFQ99732 161 aa7.72□□□□□ -1.17
SYNE1-204ENST00000367248 UNC79Q9P2D8 2635 aa7.71□□□□□ -1.17
SYNE1-204ENST00000367248 A0A087WTM6 91 aa7.71□□□□□ -1.18
SYNE1-204ENST00000367248 Q96NJ1 140 aa7.71□□□□□ -1.18
SYNE1-204ENST00000367248 BAHCC1Q9P281 2608 aa7.71□□□□□ -1.18
SYNE1-204ENST00000367248 CFAP54Q96N23 3096 aa7.7□□□□□ -1.18
SYNE1-204ENST00000367248 CCDC179H3BU77 68 aa7.7□□□□□ -1.18
SYNE1-204ENST00000367248 H0Y9P7 68 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 C9orf92A6NGG3 77 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 ANAPC11Q9NYG5 84 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 UNC80Q8N2C7 3258 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 BCE1O60756 84 aa7.69□□□□□ -1.18
SYNE1-204ENST00000367248 ATP11AUNQ6ZP68 121 aa7.68□□□□□ -1.18
SYNE1-204ENST00000367248 Q8NBF4 154 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms