RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 LITAFQ99732 161 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 SPANXDQ9BXN6 97 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 SPANXCQ9NY87 97 aa4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 SRRM2Q9UQ35 2752 aaKnown RBP4.38□□□□□ -1.71
RNU1-55P-201ENST00000365510 IFITM1P13164 125 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 DDTP30046 118 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 HSD52Q0P140 79 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 TAL2Q16559 108 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 GAGE2EQ4V326 116 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 C9orf163Q8N9P6 203 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 SND1-IT1Q9HBX3 110 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 GAGE2DQ9UEU5 116 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 DMBT1Q9UGM3 2413 aaPredicted RBP4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 VPS13BQ7Z7G8 4022 aa4.37□□□□□ -1.71
RNU1-55P-201ENST00000365510 EPM2AB3EWF7 344 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 PTTG1IPP53801 180 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 NPC2P61916 151 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 RPL24P83731 157 aaKnown RBP4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 GAGE2BQ13066 116 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 ADAMTSL4-AS1Q5T5F5 129 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 Q6ZRP5 223 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 PGPEP1Q9NXJ5 209 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 LINC00474Q9P2X8 69 aa4.36□□□□□ -1.71
RNU1-55P-201ENST00000365510 TMEM238LA0A1B0GVL6 79 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 A6NJY4 79 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 PCP4L1A6NKN8 68 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 M0R143 59 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 CTAG1AP78358 180 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 CEND1Q8N111 149 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 LINC00308Q8TCZ7 52 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 PPDPFQ9H3Y8 114 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 XAGE1AQ9HD64 81 aa4.35□□□□□ -1.71
RNU1-55P-201ENST00000365510 A0A096LNI7 61 aa4.34□□□□□ -1.71
RNU1-55P-201ENST00000365510 IGKV2-24A0A0C4DH68 120 aa4.34□□□□□ -1.71
RNU1-55P-201ENST00000365510 LINC01620Q4KN68 170 aa4.34□□□□□ -1.71
RNU1-55P-201ENST00000365510 Q5VSD8 79 aa4.34□□□□□ -1.71
RNU1-55P-201ENST00000365510 MUSTN1Q8IVN3 82 aa4.34□□□□□ -1.71
RNU1-55P-201ENST00000365510 LOC107984156A0A0G2JMH3 177 aa4.33□□□□□ -1.72
RNU1-55P-201ENST00000365510 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
RNU1-55P-201ENST00000365510 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
RNU1-55P-201ENST00000365510 SDIM1Q6ZPB5 146 aa4.33□□□□□ -1.72
RNU1-55P-201ENST00000365510 ARL17AQ8IVW1 177 aa4.33□□□□□ -1.72
RNU1-55P-201ENST00000365510 A4D1N5 150 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 NDUFC2O95298 119 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 CHTF8P0CG12 524 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 FXYD2P54710 66 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 BVES-AS1Q5T3Y7 98 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 NKAPP1Q8N9T2 125 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 SPACA4Q8TDM5 124 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
RNU1-55P-201ENST00000365510 A6NDN8 102 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 NCR3O14931 201 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 EIF4EBP3O60516 100 aaPredicted RBP4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 HINT1P49773 126 aaPredicted RBP4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 BATFQ16520 125 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 FAM19A5Q7Z5A7 132 aaPredicted RBP4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 DPH3Q96FX2 82 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 FAM30AQ9NZY2 134 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 DNAH8Q96JB1 4490 aa4.31□□□□□ -1.72
RNU1-55P-201ENST00000365510 IGLV5-37A0A075B6J1 123 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 TRAV13-2A0A0B4J235 113 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 A0A0B4J2C4 111 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 M0QXV9 152 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 VPREB1P12018 145 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 SERTAD4-AS1Q5TG53 156 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 RAB37Q96AX2 223 aa4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.3□□□□□ -1.72
RNU1-55P-201ENST00000365510 IGKV2-28A0A075B6P5 120 aa4.29□□□□□ -1.72
RNU1-55P-201ENST00000365510 IGKV2D-28P01615 120 aa4.29□□□□□ -1.72
RNU1-55P-201ENST00000365510 S100A7L2Q5SY68 101 aa4.29□□□□□ -1.72
RNU1-55P-201ENST00000365510 A0A087WYN8 130 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 A0A1B0GWB2 263 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 A0A1W2PNN7 141 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 PANO1I0J062 215 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 K7ERJ3 54 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 M0R378 163 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 CFC1BP0CG36 223 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 CFC1P0CG37 223 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 RPL13AP40429 203 aaKnown RBP4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 LBHQ53QV2 105 aaPredicted RBP4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 Q6ZSA8 131 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 MRPL55Q7Z7F7 128 aaKnown RBP4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 Q8NDZ9 215 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 OR13C6PQ8NH95 151 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 CBY1Q9Y3M2 126 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 C22orf24Q9Y442 160 aa4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 LRP1Q07954 4544 aaKnown RBP4.28□□□□□ -1.72
RNU1-55P-201ENST00000365510 GAGE10A6NGK3 116 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 J3QL48 77 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 PRR3P79522 188 aaKnown RBP4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 Q1RN00 199 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 LINC00337Q8N6G1 96 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 SNHG12Q9BXW3 62 aa4.27□□□□□ -1.73
RNU1-55P-201ENST00000365510 TMEM126AQ9H061 195 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms