RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 PDE4DIPQ5VU43 2346 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 C5orf42Q9H799 3197 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 MBD5Q9P267 1494 aa-0.8□□□□□ -2.54
RNU6-428P-201ENST00000362942 TET3O43151 1660 aa-0.81□□□□□ -2.54
RNU6-428P-201ENST00000362942 CSMD1Q96PZ7 3565 aa-0.81□□□□□ -2.54
RNU6-428P-201ENST00000362942 LINC01600Q96MT4 127 aa-0.81□□□□□ -2.54
RNU6-428P-201ENST00000362942 FREM2Q5SZK8 3169 aa-0.81□□□□□ -2.54
RNU6-428P-201ENST00000362942 ROBO1Q9Y6N7 1651 aa-0.81□□□□□ -2.54
RNU6-428P-201ENST00000362942 HMGXB3Q12766 1538 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 EHBP1L1Q8N3D4 1523 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 MT2AP02795 61 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 COX6CP09669 75 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 AKAIN1P0CW23 69 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 MT1MQ8N339 61 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 LINC00474Q9P2X8 69 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 FMN2Q9NZ56 1722 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 CSMD2Q7Z408 3487 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 QRICH2Q9H0J4 1663 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 LRBAP50851 2863 aa-0.82□□□□□ -2.54
RNU6-428P-201ENST00000362942 NUP188Q5SRE5 1749 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 XRN1Q8IZH2 1706 aaKnown RBP-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 A0A1B0GWA3 101 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 FAM24AA6NFZ4 105 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 NDUFA2O43678 99 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 MT1GP13640 62 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 KRTAP8-1Q8IUC2 63 aa-0.83□□□□□ -2.54
RNU6-428P-201ENST00000362942 DNAJC13O75165 2243 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 SPEGQ15772 3267 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 A2ML1A8K2U0 1454 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 C1orf167Q5SNV9 1468 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 TRAPPC2P0DI81 140 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 TRAPPC2BP0DI82 140 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 GNG11P61952 73 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 S100A12P80511 92 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 C9orf153Q5TBE3 101 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 PP6455Q8WZ26 134 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 APLNQ9ULZ1 77 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 DIP2CQ9Y2E4 1556 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 CENPEQ02224 2701 aa-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 SPTAN1Q13813 2472 aaKnown RBP-0.84□□□□□ -2.54
RNU6-428P-201ENST00000362942 CPSF4LA6NMK7 179 aaKnown RBP-0.85□□□□□ -2.55
RNU6-428P-201ENST00000362942 OOSP1A8MZH6 123 aa-0.85□□□□□ -2.55
RNU6-428P-201ENST00000362942 MANBALQ9NQG1 85 aa-0.85□□□□□ -2.55
RNU6-428P-201ENST00000362942 PAPPA2Q9BXP8 1791 aa-0.85□□□□□ -2.55
RNU6-428P-201ENST00000362942 ZFHX4Q86UP3 3567 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 CDC42BPGQ6DT37 1551 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 NAP1L6A6NFF2 107 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 K7EP13 123 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 SEC11AP67812 179 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 DEFB110Q30KQ9 67 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 SCN7AQ01118 1682 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 CUL7Q14999 1698 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 TRRAPQ9Y4A5 3859 aa-0.86□□□□□ -2.55
RNU6-428P-201ENST00000362942 CEP290O15078 2479 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 DNAH11Q96DT5 4516 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 CEP350Q5VT06 3117 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 LOC100130705A0A1B0GUX0 176 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 Q0VG73 95 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 C12orf57Q99622 126 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 DPH3P1Q9H4G8 78 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 PRO1854Q9UHT4 67 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 MRC2Q9UBG0 1479 aa-0.87□□□□□ -2.55
RNU6-428P-201ENST00000362942 ZFHX3Q15911 3703 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 SCAPERQ9BY12 1400 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 TOP2BQ02880 1626 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 C9orf92A6NGG3 77 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 SMR3BP02814 79 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 SAA2P0DJI9 122 aaPredicted RBP-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 FAM107BQ9H098 131 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 CRIPTQ9P021 101 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 ADGRL2O95490 1459 aa-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 PDCD11Q14690 1871 aaKnown RBP-0.88□□□□□ -2.55
RNU6-428P-201ENST00000362942 SLIT1O75093 1534 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 FAM223BA6NKX1 122 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 SNAPC5O75971 98 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 HMGN1P05114 100 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 H1FX-AS1Q4G0G2 97 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 S4R3F8 94 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 RANBP2P49792 3224 aaKnown RBP-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 NALCNQ8IZF0 1738 aa-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 TROQ12816 1431 aaPredicted RBP-0.89□□□□□ -2.55
RNU6-428P-201ENST00000362942 COL4A6Q14031 1691 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 MYOM2P54296 1465 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 PLEKHH2Q8IVE3 1493 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 I3L3M4 83 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 ASIPP42127 132 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 SVBPQ8N300 66 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 MT1LQ93083 61 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 DNAH9Q9NYC9 4486 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 WDFY4Q6ZS81 3184 aa-0.9□□□□□ -2.55
RNU6-428P-201ENST00000362942 EP400Q96L91 3159 aa-0.91□□□□□ -2.55
RNU6-428P-201ENST00000362942 CRYBG3Q68DQ2 2970 aa-0.91□□□□□ -2.55
RNU6-428P-201ENST00000362942 MT1EP04732 61 aa-0.91□□□□□ -2.56
RNU6-428P-201ENST00000362942 RPS29P62273 56 aaKnown RBP-0.91□□□□□ -2.56
RNU6-428P-201ENST00000362942 CLPSL2Q6UWE3 100 aa-0.91□□□□□ -2.56
RNU6-428P-201ENST00000362942 LCN9Q8WX39 176 aa-0.91□□□□□ -2.56
RNU6-428P-201ENST00000362942 A0A087WVE0 104 aa-0.92□□□□□ -2.56
RNU6-428P-201ENST00000362942 A0A1B0GU69 56 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms