RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 TMEM126AQ9H061 195 aa8.92□□□□□ -0.98
SQSTM1-201ENST00000360718 Q9HAA7 133 aa8.92□□□□□ -0.98
SQSTM1-201ENST00000360718 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
SQSTM1-201ENST00000360718 OR13C6PQ8NH95 151 aa8.92□□□□□ -0.98
SQSTM1-201ENST00000360718 XCL1P47992 114 aa8.91□□□□□ -0.98
SQSTM1-201ENST00000360718 REG3AQ06141 175 aa8.91□□□□□ -0.98
SQSTM1-201ENST00000360718 WFDC10BQ8IUB3 73 aa8.91□□□□□ -0.98
SQSTM1-201ENST00000360718 C22orf24Q9Y442 160 aa8.91□□□□□ -0.98
SQSTM1-201ENST00000360718 TGP01266 2768 aa8.91□□□□□ -0.98
SQSTM1-201ENST00000360718 SDIM1Q6ZPB5 146 aa8.9□□□□□ -0.98
SQSTM1-201ENST00000360718 KLK12Q9UKR0 248 aa8.9□□□□□ -0.98
SQSTM1-201ENST00000360718 A0A087WYN8 130 aa8.89□□□□□ -0.99
SQSTM1-201ENST00000360718 GAGE2AQ6NT46 116 aa8.89□□□□□ -0.99
SQSTM1-201ENST00000360718 DYNC2H1Q8NCM8 4307 aaKnown RBP8.89□□□□□ -0.99
SQSTM1-201ENST00000360718 NUPR2A6NF83 97 aa8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 CXCL5P42830 114 aa8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 DNAH7Q8WXX0 4024 aa8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 TENM2Q9NT68 2774 aa8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 SMCR5Q8TEV8 140 aa8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 KLK5Q9Y337 293 aaPredicted RBP8.88□□□□□ -0.99
SQSTM1-201ENST00000360718 LECT2O14960 151 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 COX17Q14061 63 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 LINC01556Q5JQF7 62 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 SMIM20Q8N5G0 67 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 PRR34Q9NV39 138 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 LINC00588Q9Y4M8 146 aa8.87□□□□□ -0.99
SQSTM1-201ENST00000360718 LYSTQ99698 3801 aa8.86□□□□□ -0.99
SQSTM1-201ENST00000360718 CD164L2Q6UWJ8 174 aa8.86□□□□□ -0.99
SQSTM1-201ENST00000360718 CHCHD10Q8WYQ3 142 aaPredicted RBP8.86□□□□□ -0.99
SQSTM1-201ENST00000360718 IGLV10-54A0A075B6I4 117 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 FAM236AA0A1B0GUQ0 79 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 FAM236BA0A1B0GV22 79 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 A0A1B0GX51 115 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 NDUFC2O95298 119 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 OBSCN-AS1Q96MR7 158 aa8.85□□□□□ -0.99
SQSTM1-201ENST00000360718 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
SQSTM1-201ENST00000360718 ORMDL1Q9P0S3 153 aa8.84□□□□□ -0.99
SQSTM1-201ENST00000360718 ENHOQ6UWT2 76 aa8.84□□□□□ -0.99
SQSTM1-201ENST00000360718 APLNQ9ULZ1 77 aa8.84□□□□□ -0.99
SQSTM1-201ENST00000360718 STARD9Q9P2P6 4700 aa8.84□□□□□ -0.99
SQSTM1-201ENST00000360718 UPK3BQ9BT76 320 aa8.83□□□□□ -1
SQSTM1-201ENST00000360718 UQCRQO14949 82 aa8.83□□□□□ -1
SQSTM1-201ENST00000360718 UBE2DNLQ8IWF7 75 aa8.83□□□□□ -1
SQSTM1-201ENST00000360718 PLECQ15149 4684 aaKnown RBP8.82□□□□□ -1
SQSTM1-201ENST00000360718 C14orf132Q9NPU4 83 aa8.82□□□□□ -1
SQSTM1-201ENST00000360718 KIAA0087Q14695 138 aa8.82□□□□□ -1
SQSTM1-201ENST00000360718 C3orf22Q8N5N4 141 aa8.82□□□□□ -1
SQSTM1-201ENST00000360718 MUC7Q8TAX7 377 aa8.8□□□□□ -1
SQSTM1-201ENST00000360718 JMJD7-PLA2G4BH0Y9G9 81 aa8.8□□□□□ -1
SQSTM1-201ENST00000360718 LINC00526Q96FQ7 95 aa8.8□□□□□ -1
SQSTM1-201ENST00000360718 LINC00167Q96N53 147 aa8.8□□□□□ -1
SQSTM1-201ENST00000360718 C1orf43Q9BWL3 253 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 TMEM256-PLSCR3K7ERE1 68 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 SLPIP03973 132 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 C9orf153Q5TBE3 101 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 Q8N814 137 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 DNAH1Q9P2D7 4330 aa8.79□□□□□ -1
SQSTM1-201ENST00000360718 NCR3O14931 201 aa8.78□□□□□ -1
SQSTM1-201ENST00000360718 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
SQSTM1-201ENST00000360718 Q6JHZ5 121 aa8.78□□□□□ -1
SQSTM1-201ENST00000360718 IGKV2D-24A0A075B6R9 120 aa8.77□□□□□ -1.01
SQSTM1-201ENST00000360718 CCKP06307 115 aa8.77□□□□□ -1.01
SQSTM1-201ENST00000360718 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
SQSTM1-201ENST00000360718 S100A7L2Q5SY68 101 aa8.76□□□□□ -1.01
SQSTM1-201ENST00000360718 LINC00846Q9NV44 126 aa8.76□□□□□ -1.01
SQSTM1-201ENST00000360718 ATOX1O00244 68 aa8.75□□□□□ -1.01
SQSTM1-201ENST00000360718 COX7CP15954 63 aa8.75□□□□□ -1.01
SQSTM1-201ENST00000360718 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
SQSTM1-201ENST00000360718 RMI2Q96E14 147 aa8.75□□□□□ -1.01
SQSTM1-201ENST00000360718 CRYGAP11844 174 aa8.73□□□□□ -1.01
SQSTM1-201ENST00000360718 SPAG11BQ08648 103 aa8.73□□□□□ -1.01
SQSTM1-201ENST00000360718 C6orf99Q4VX62 202 aa8.73□□□□□ -1.01
SQSTM1-201ENST00000360718 C9orf116Q5BN46 136 aaPredicted RBP8.73□□□□□ -1.01
SQSTM1-201ENST00000360718 KRTAP26-1Q6PEX3 210 aa8.73□□□□□ -1.01
SQSTM1-201ENST00000360718 WWC2-AS2Q96NR7 200 aa8.72□□□□□ -1.01
SQSTM1-201ENST00000360718 IGKV3D-7A0A0C4DH55 119 aa8.71□□□□□ -1.01
SQSTM1-201ENST00000360718 KRTAP1-5Q9BYS1 174 aa8.71□□□□□ -1.01
SQSTM1-201ENST00000360718 VPS13DQ5THJ4 4388 aa8.71□□□□□ -1.01
SQSTM1-201ENST00000360718 RPL18AQ02543 176 aaKnown RBP8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 UNQ6190/PRO20217Q6UXQ8 127 aa8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 LINC00575Q6W349 94 aa8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 H3BQ85 93 aa8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 ZNF561-AS1K7EIQ3 104 aa8.7□□□□□ -1.02
SQSTM1-201ENST00000360718 ATP5EP2Q5VTU8 51 aa8.69□□□□□ -1.02
SQSTM1-201ENST00000360718 hADV29S1A0JD25 119 aa8.69□□□□□ -1.02
SQSTM1-201ENST00000360718 GVQW2A0A096LPI5 108 aaPredicted RBP8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 RPS28P62857 69 aaKnown RBP8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 C6orf223Q8N319 242 aa8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 J3KT08 172 aa8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 C5orf47Q569G3 176 aa8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 C10orf25Q5T742 122 aa8.68□□□□□ -1.02
SQSTM1-201ENST00000360718 IGLV6-57P01721 117 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 C15orf56Q8N910 161 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 UBL5Q9BZL1 73 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 DNAH10Q8IVF4 4471 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 NBDYA0A0U1RRE5 68 aa8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 RBM3P98179 157 aaKnown RBP8.66□□□□□ -1.02
SQSTM1-201ENST00000360718 Q8NDZ9 215 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms