RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 LINC00167Q96N53 147 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 EPG5Q9HCE0 2579 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 A0A087WSZ3 146 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 LINC01547P58512 204 aaPredicted RBP3.33□□□□□ -1.88
SCN3A-202ENST00000360093 LINC00588Q9Y4M8 146 aa3.33□□□□□ -1.88
SCN3A-202ENST00000360093 Q6ZVQ6 151 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 Q8N3U1 123 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 SNURFQ9Y675 71 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 PRLHP81277 87 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 IGHV6-1A0A0B4J1U7 121 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 HCG22E2RYF7 251 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 BRK1Q8WUW1 75 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 TP53AIP1Q9HCN2 124 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 BCE1O60756 84 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 TRANK1O15050 2925 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 C19orf73Q9NVV2 129 aa3.32□□□□□ -1.88
SCN3A-202ENST00000360093 SPATA3Q8NHX4 192 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 MPLKIPQ8TAP9 179 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 hDV103S1A0JD37 113 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 Q6ZRP5 223 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 LINC00208Q96KT6 92 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 KIAA0087Q14695 138 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 Q6ZRX8 168 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 FAM229AH3BQW9 127 aa3.31□□□□□ -1.88
SCN3A-202ENST00000360093 RTL8CO15255 209 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 LOC110117498A0A087WWA1 95 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 TRBV7-7A0A0K0K1E9 115 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 LINC00846Q9NV44 126 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 C5orf42Q9H799 3197 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 H0Y9P7 68 aa3.3□□□□□ -1.88
SCN3A-202ENST00000360093 CHD7Q9P2D1 2997 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 Q8NBF4 154 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 IGLV6-57P01721 117 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 LINC00612Q8N6U2 182 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 CRYGAP11844 174 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 PRR34Q9NV39 138 aa3.29□□□□□ -1.88
SCN3A-202ENST00000360093 A6NED7 52 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 CCDC179H3BU77 68 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 Q9UF83 564 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 SOSTDC1Q6X4U4 206 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 KRTAP1-3Q8IUG1 177 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 K7EIL1 84 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 H3BPC8 53 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 MOBPQ13875 183 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 TM2D3Q9BRN9 247 aa3.28□□□□□ -1.88
SCN3A-202ENST00000360093 KRTAP10-11P60412 298 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 PCNTO95613 3336 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 CR1P17927 2039 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 PLA2G1BP04054 148 aaKnown RBP3.27□□□□□ -1.89
SCN3A-202ENST00000360093 PHF5AQ7RTV0 110 aaKnown RBP3.27□□□□□ -1.89
SCN3A-202ENST00000360093 TMEM254Q8TBM7 123 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 A0A087WVE0 104 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 TRBV7-4A0A0J9YYF1 115 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 Q6ZQT0 140 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 VPREB1P12018 145 aa3.27□□□□□ -1.89
SCN3A-202ENST00000360093 LINC00476Q8WZB0 136 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 PLA2G2DQ9UNK4 145 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 GIG44P09565 113 aaPredicted RBP3.26□□□□□ -1.89
SCN3A-202ENST00000360093 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 TYMSOSQ8TAI1 123 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 LITAFQ99732 161 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 KCNQ1DNQ9H478 68 aa3.26□□□□□ -1.89
SCN3A-202ENST00000360093 KRTAP10-3P60369 221 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 DEFB116Q30KQ4 102 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 LINC00313P59037 77 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 C1orf64Q8NEQ6 169 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 FAM218AQ96MZ4 157 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 CDIP1Q9H305 208 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 PRO0461Q9UI25 63 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 IGLV1-50A0A075B6I6 118 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 PRR4Q16378 134 aa3.25□□□□□ -1.89
SCN3A-202ENST00000360093 RPL37AP61513 92 aaKnown RBP3.24□□□□□ -1.89
SCN3A-202ENST00000360093 C8orf87E5RJ46 101 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 KRTAP1-1Q07627 177 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 HTTP42858 3142 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 SMCPP49901 116 aaPredicted RBP3.24□□□□□ -1.89
SCN3A-202ENST00000360093 LINC00336Q6ZUF6 198 aa3.24□□□□□ -1.89
SCN3A-202ENST00000360093 ACYP2P14621 99 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 SPAG11AQ6PDA7 123 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 FLNAP21333 2647 aaKnown RBP3.23□□□□□ -1.89
SCN3A-202ENST00000360093 CHD9Q3L8U1 2897 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 SMIM29Q86T20 159 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 PCOTHQ58A44 107 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 SSBP3-AS1Q7Z2R9 100 aa3.23□□□□□ -1.89
SCN3A-202ENST00000360093 HELZ2Q9BYK8 2649 aaKnown RBP3.23□□□□□ -1.89
SCN3A-202ENST00000360093 C15orf56Q8N910 161 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
SCN3A-202ENST00000360093 WIPF1O43516 503 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 LINC00528Q8N1L1 170 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 C9orf163Q8N9P6 203 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 ITPR3Q14573 2671 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 A8MWP4 228 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 CNBPP62633 177 aaKnown RBP3.22□□□□□ -1.89
SCN3A-202ENST00000360093 ZNF861PO60384 105 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 A0A087WTM6 91 aa3.22□□□□□ -1.89
SCN3A-202ENST00000360093 TRAV22A0A0B4J277 110 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms