RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 VWFP04275 2813 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 NDUFC1O43677 76 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 Q8IZM0 81 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 C11orf68Q9H3H3 251 aaKnown RBP10.33□□□□□ -0.76
UBAP1-202ENST00000359544 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
UBAP1-202ENST00000359544 TRBV6-8A0A0A6YYG3 113 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 ATP5EP56381 51 aaPredicted RBP10.33□□□□□ -0.76
UBAP1-202ENST00000359544 LINC01547P58512 204 aaPredicted RBP10.33□□□□□ -0.76
UBAP1-202ENST00000359544 C18orf65Q6ZTR6 163 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 SPATA3Q8NHX4 192 aa10.33□□□□□ -0.76
UBAP1-202ENST00000359544 LOC100131303A0A0U1RQF7 123 aa10.32□□□□□ -0.76
UBAP1-202ENST00000359544 ZNF561-AS1K7EIQ3 104 aa10.32□□□□□ -0.76
UBAP1-202ENST00000359544 TRGV2A0A075B6R0 118 aa10.32□□□□□ -0.76
UBAP1-202ENST00000359544 LINC00959A0A1B0GUT2 108 aa10.32□□□□□ -0.76
UBAP1-202ENST00000359544 ODF3L2Q3SX64 289 aa10.31□□□□□ -0.76
UBAP1-202ENST00000359544 F8WEM9 126 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 CXCL6P80162 114 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 HAMPP81172 84 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 C6orf223Q8N319 242 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 C4orf3Q8WVX3 66 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 C16orf95Q9H693 158 aa10.3□□□□□ -0.76
UBAP1-202ENST00000359544 PDE6GP18545 87 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 Q6ZVQ6 151 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 RMI2Q96E14 147 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 C16orf74Q96GX8 76 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 C1orf43Q9BWL3 253 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 SNURFQ9Y675 71 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 COX17Q14061 63 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 LINC00575Q6W349 94 aa10.29□□□□□ -0.76
UBAP1-202ENST00000359544 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 TRAV10A0A0B4J240 114 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 C6orf99Q4VX62 202 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 KHDC1LQ5JSQ8 128 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 FP248Q71RG6 208 aaPredicted RBP10.28□□□□□ -0.76
UBAP1-202ENST00000359544 LAMTOR3Q9UHA4 124 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 H3BQ85 93 aa10.28□□□□□ -0.76
UBAP1-202ENST00000359544 PRR3P79522 188 aaKnown RBP10.28□□□□□ -0.76
UBAP1-202ENST00000359544 TRBV7-6A0A0J9YX20 115 aa10.25□□□□□ -0.77
UBAP1-202ENST00000359544 C9orf66Q5T8R8 295 aa10.25□□□□□ -0.77
UBAP1-202ENST00000359544 PLAC8L1A1L4L8 177 aa10.24□□□□□ -0.77
UBAP1-202ENST00000359544 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
UBAP1-202ENST00000359544 MGAM2Q2M2H8 2515 aa10.23□□□□□ -0.77
UBAP1-202ENST00000359544 Q8N3U1 123 aa10.23□□□□□ -0.77
UBAP1-202ENST00000359544 TRBV7-4A0A0J9YYF1 115 aa10.22□□□□□ -0.77
UBAP1-202ENST00000359544 MIFP14174 115 aa10.22□□□□□ -0.77
UBAP1-202ENST00000359544 RPL35AP18077 110 aaKnown RBP10.22□□□□□ -0.77
UBAP1-202ENST00000359544 A0A1B0GUV1 79 aa10.21□□□□□ -0.77
UBAP1-202ENST00000359544 M0R2N4 97 aa10.21□□□□□ -0.77
UBAP1-202ENST00000359544 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.78
UBAP1-202ENST00000359544 IGHV4-28A0A0C4DH34 117 aa10.2□□□□□ -0.78
UBAP1-202ENST00000359544 FBN3Q75N90 2809 aa10.19□□□□□ -0.78
UBAP1-202ENST00000359544 F8WDY8 70 aa10.19□□□□□ -0.78
UBAP1-202ENST00000359544 ERC2-IT1O76042 136 aa10.19□□□□□ -0.78
UBAP1-202ENST00000359544 TM2D3Q9BRN9 247 aa10.19□□□□□ -0.78
UBAP1-202ENST00000359544 PKIGQ9Y2B9 76 aa10.19□□□□□ -0.78
UBAP1-202ENST00000359544 CMC4P56277 68 aaPredicted RBP10.18□□□□□ -0.78
UBAP1-202ENST00000359544 KIAA0087Q14695 138 aa10.18□□□□□ -0.78
UBAP1-202ENST00000359544 NREPQ16612 68 aa10.18□□□□□ -0.78
UBAP1-202ENST00000359544 MUC7Q8TAX7 377 aa10.18□□□□□ -0.78
UBAP1-202ENST00000359544 LINC00474Q9P2X8 69 aa10.17□□□□□ -0.78
UBAP1-202ENST00000359544 GIG44P09565 113 aaPredicted RBP10.16□□□□□ -0.78
UBAP1-202ENST00000359544 Q6ZQY7 126 aa10.16□□□□□ -0.78
UBAP1-202ENST00000359544 TMEM254Q8TBM7 123 aa10.16□□□□□ -0.78
UBAP1-202ENST00000359544 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.78
UBAP1-202ENST00000359544 BRK1Q8WUW1 75 aa10.15□□□□□ -0.78
UBAP1-202ENST00000359544 CLPSL2Q6UWE3 100 aa10.15□□□□□ -0.78
UBAP1-202ENST00000359544 NOTCH1P46531 2555 aa10.15□□□□□ -0.79
UBAP1-202ENST00000359544 Q8NDZ9 215 aa10.14□□□□□ -0.79
UBAP1-202ENST00000359544 BPY2O14599 106 aa10.13□□□□□ -0.79
UBAP1-202ENST00000359544 IGLV6-57P01721 117 aa10.13□□□□□ -0.79
UBAP1-202ENST00000359544 C9orf116Q5BN46 136 aaPredicted RBP10.13□□□□□ -0.79
UBAP1-202ENST00000359544 NOTCH3Q9UM47 2321 aa10.12□□□□□ -0.79
UBAP1-202ENST00000359544 MEGF8Q7Z7M0 2845 aa10.12□□□□□ -0.79
UBAP1-202ENST00000359544 SCXQ7RTU7 201 aa10.12□□□□□ -0.79
UBAP1-202ENST00000359544 GYPEP15421 78 aa10.11□□□□□ -0.79
UBAP1-202ENST00000359544 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.11□□□□□ -0.79
UBAP1-202ENST00000359544 LINC00269Q8N2A0 174 aa10.11□□□□□ -0.79
UBAP1-202ENST00000359544 C1orf195Q5TG92 126 aa10.11□□□□□ -0.79
UBAP1-202ENST00000359544 CSNK1G2-AS1Q8NCQ2 148 aa10.1□□□□□ -0.79
UBAP1-202ENST00000359544 CHCHD10Q8WYQ3 142 aaPredicted RBP10.1□□□□□ -0.79
UBAP1-202ENST00000359544 CCL24O00175 119 aa10.09□□□□□ -0.79
UBAP1-202ENST00000359544 PRYO14603 147 aa10.09□□□□□ -0.79
UBAP1-202ENST00000359544 DIRC1Q969H9 104 aa10.09□□□□□ -0.79
UBAP1-202ENST00000359544 V9GYY9 64 aa10.08□□□□□ -0.8
UBAP1-202ENST00000359544 FUSP35637 526 aaKnown RBP eCLIP10.07□□□□□ -0.8
UBAP1-202ENST00000359544 ESRGQ1W209 222 aa10.07□□□□□ -0.8
UBAP1-202ENST00000359544 A0A0U1RQV1 116 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 DEFB130BP0DP73 79 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 DEFB130AP0DP74 79 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 COX7BP24311 80 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 MPLKIPQ8TAP9 179 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 FAM229BQ4G0N7 80 aa10.06□□□□□ -0.8
UBAP1-202ENST00000359544 WFDC10AQ9H1F0 79 aa10.05□□□□□ -0.8
UBAP1-202ENST00000359544 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
UBAP1-202ENST00000359544 REG3AQ06141 175 aa10.04□□□□□ -0.8
UBAP1-202ENST00000359544 OXLD1Q5BKU9 147 aa10.04□□□□□ -0.8
UBAP1-202ENST00000359544 A0A0J9YWU9 116 aa10.04□□□□□ -0.8
UBAP1-202ENST00000359544 PRB2P02812 416 aaPredicted RBP10.04□□□□□ -0.8
UBAP1-202ENST00000359544 ANGP03950 147 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms