RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PCOTHQ58A44 107 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 F8WDY8 70 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 FAM19A4Q96LR4 140 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 ZNF702PQ9H963 129 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 A8MTW9 85 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 IGLV5-45A0A087WSX0 123 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 C1orf64Q8NEQ6 169 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 BRI3O95415 125 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 FHL3Q13643 280 aa6.23□□□□□ -1.41
COL6A6-201ENST00000358511 FAM218AQ96MZ4 157 aa6.22□□□□□ -1.41
COL6A6-201ENST00000358511 KIF25-AS1Q9Y6Z4 181 aa6.22□□□□□ -1.41
COL6A6-201ENST00000358511 Q8N2B8 174 aa6.22□□□□□ -1.41
COL6A6-201ENST00000358511 EPG5Q9HCE0 2579 aa6.22□□□□□ -1.41
COL6A6-201ENST00000358511 UTRNP46939 3433 aa6.21□□□□□ -1.42
COL6A6-201ENST00000358511 SPATA3Q8NHX4 192 aa6.21□□□□□ -1.42
COL6A6-201ENST00000358511 INAFM1C9JVW0 142 aa6.21□□□□□ -1.42
COL6A6-201ENST00000358511 ERC2-IT1O76042 136 aa6.2□□□□□ -1.42
COL6A6-201ENST00000358511 Q6ZQT0 140 aa6.2□□□□□ -1.42
COL6A6-201ENST00000358511 Q6ZSN1 163 aa6.2□□□□□ -1.42
COL6A6-201ENST00000358511 SMCR5Q8TEV8 140 aa6.2□□□□□ -1.42
COL6A6-201ENST00000358511 LINC01556Q5JQF7 62 aa6.2□□□□□ -1.42
COL6A6-201ENST00000358511 TP53AIP1Q9HCN2 124 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 A0A087WSZ3 146 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 NHLRC4P0CG21 123 aaPredicted RBP6.19□□□□□ -1.42
COL6A6-201ENST00000358511 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 CEP350Q5VT06 3117 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 TM2D3Q9BRN9 247 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 Q9BRP9 147 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 IGLV8-61A0A075B6I0 122 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 C18orf65Q6ZTR6 163 aa6.19□□□□□ -1.42
COL6A6-201ENST00000358511 LINC00482Q8N8I6 264 aa6.18□□□□□ -1.42
COL6A6-201ENST00000358511 C2orf48Q96LS8 159 aa6.18□□□□□ -1.42
COL6A6-201ENST00000358511 ODF3L2Q3SX64 289 aa6.18□□□□□ -1.42
COL6A6-201ENST00000358511 EDN2P20800 178 aa6.18□□□□□ -1.42
COL6A6-201ENST00000358511 C6orf223Q8N319 242 aa6.18□□□□□ -1.42
COL6A6-201ENST00000358511 H3BPC8 53 aa6.17□□□□□ -1.42
COL6A6-201ENST00000358511 A0A1B0GU69 56 aa6.17□□□□□ -1.42
COL6A6-201ENST00000358511 ATP11AUNQ6ZP68 121 aa6.17□□□□□ -1.42
COL6A6-201ENST00000358511 Q9UF83 564 aa6.17□□□□□ -1.42
COL6A6-201ENST00000358511 C5orf42Q9H799 3197 aa6.16□□□□□ -1.42
COL6A6-201ENST00000358511 IGHV3OR16-9A0A0B4J2B5 98 aa6.16□□□□□ -1.42
COL6A6-201ENST00000358511 KLKP1Q107X0 134 aa6.16□□□□□ -1.42
COL6A6-201ENST00000358511 CD164Q04900 197 aa6.16□□□□□ -1.42
COL6A6-201ENST00000358511 LINC00315P59091 139 aa6.15□□□□□ -1.42
COL6A6-201ENST00000358511 DEFB116Q30KQ4 102 aa6.15□□□□□ -1.42
COL6A6-201ENST00000358511 LINC01006Q8NI28 216 aa6.15□□□□□ -1.43
COL6A6-201ENST00000358511 C1orf134Q5TEV5 83 aa6.15□□□□□ -1.43
COL6A6-201ENST00000358511 Q6ZTC4 211 aa6.14□□□□□ -1.43
COL6A6-201ENST00000358511 C11orf72Q8NBR9 251 aa6.14□□□□□ -1.43
COL6A6-201ENST00000358511 LINC00336Q6ZUF6 198 aa6.14□□□□□ -1.43
COL6A6-201ENST00000358511 SPACA4Q8TDM5 124 aa6.14□□□□□ -1.43
COL6A6-201ENST00000358511 CFAP54Q96N23 3096 aa6.13□□□□□ -1.43
COL6A6-201ENST00000358511 CYP4F30PQ9H0H9 118 aa6.13□□□□□ -1.43
COL6A6-201ENST00000358511 C19orf84I3L1E1 186 aa6.13□□□□□ -1.43
COL6A6-201ENST00000358511 LAMA2P24043 3122 aaKnown RBP6.13□□□□□ -1.43
COL6A6-201ENST00000358511 FAM229AH3BQW9 127 aa6.13□□□□□ -1.43
COL6A6-201ENST00000358511 APLNQ9ULZ1 77 aa6.13□□□□□ -1.43
COL6A6-201ENST00000358511 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
COL6A6-201ENST00000358511 LITAFQ99732 161 aa6.12□□□□□ -1.43
COL6A6-201ENST00000358511 ELOF1P60002 83 aaKnown RBP6.12□□□□□ -1.43
COL6A6-201ENST00000358511 C10orf142B7Z368 130 aa6.12□□□□□ -1.43
COL6A6-201ENST00000358511 TRAV22A0A0B4J277 110 aa6.12□□□□□ -1.43
COL6A6-201ENST00000358511 KIAA0087Q14695 138 aa6.11□□□□□ -1.43
COL6A6-201ENST00000358511 C6orf48Q9UBA6 75 aa6.11□□□□□ -1.43
COL6A6-201ENST00000358511 IGLV1-51P01701 117 aa6.11□□□□□ -1.43
COL6A6-201ENST00000358511 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
COL6A6-201ENST00000358511 GCN1Q92616 2671 aaKnown RBP6.1□□□□□ -1.43
COL6A6-201ENST00000358511 FLNAP21333 2647 aaKnown RBP6.1□□□□□ -1.43
COL6A6-201ENST00000358511 KTN1-AS1Q86SY8 53 aa6.1□□□□□ -1.43
COL6A6-201ENST00000358511 WIPF1O43516 503 aa6.1□□□□□ -1.43
COL6A6-201ENST00000358511 CHD6Q8TD26 2715 aa6.09□□□□□ -1.43
COL6A6-201ENST00000358511 CRIPTQ9P021 101 aa6.09□□□□□ -1.43
COL6A6-201ENST00000358511 MAP1AP78559 2803 aaPredicted RBP6.09□□□□□ -1.43
COL6A6-201ENST00000358511 Q8NBF4 154 aa6.09□□□□□ -1.43
COL6A6-201ENST00000358511 H7BZZ5 65 aa6.09□□□□□ -1.43
COL6A6-201ENST00000358511 PRR15Q8IV56 129 aa6.08□□□□□ -1.44
COL6A6-201ENST00000358511 HECTD1Q9ULT8 2610 aa6.07□□□□□ -1.44
COL6A6-201ENST00000358511 Q6ZRU5 148 aa6.07□□□□□ -1.44
COL6A6-201ENST00000358511 ATRQ13535 2644 aa6.07□□□□□ -1.44
COL6A6-201ENST00000358511 LY6G6DO95868 133 aa6.06□□□□□ -1.44
COL6A6-201ENST00000358511 Q6ZRX8 168 aa6.06□□□□□ -1.44
COL6A6-201ENST00000358511 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
COL6A6-201ENST00000358511 NBEAL1Q6ZS30 2694 aa6.05□□□□□ -1.44
COL6A6-201ENST00000358511 IGLV6-57P01721 117 aa6.05□□□□□ -1.44
COL6A6-201ENST00000358511 LYPD5Q6UWN5 251 aa6.05□□□□□ -1.44
COL6A6-201ENST00000358511 A8MUN3 132 aa6.04□□□□□ -1.44
COL6A6-201ENST00000358511 AVPP01185 164 aa6.04□□□□□ -1.44
COL6A6-201ENST00000358511 TRBV7-4A0A0J9YYF1 115 aa6.03□□□□□ -1.44
COL6A6-201ENST00000358511 MAST4O15021 2626 aa6.03□□□□□ -1.44
COL6A6-201ENST00000358511 COA5Q86WW8 74 aa6.03□□□□□ -1.44
COL6A6-201ENST00000358511 C22orf24Q9Y442 160 aa6.02□□□□□ -1.45
COL6A6-201ENST00000358511 LOC101927531A0A1B0GV80 90 aa6.02□□□□□ -1.45
COL6A6-201ENST00000358511 LINC00476Q8WZB0 136 aa6.02□□□□□ -1.45
COL6A6-201ENST00000358511 MOBPQ13875 183 aa6.02□□□□□ -1.45
COL6A6-201ENST00000358511 MGAM2Q2M2H8 2515 aa6.01□□□□□ -1.45
COL6A6-201ENST00000358511 NOTCH1P46531 2555 aa6.01□□□□□ -1.45
COL6A6-201ENST00000358511 CDSNQ15517 529 aa6□□□□□ -1.45
COL6A6-201ENST00000358511 C9orf129Q5T035 196 aaKnown RBP6□□□□□ -1.45
COL6A6-201ENST00000358511 K7EQZ3 153 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms