RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 SMCO4Q9NRQ5 59 aa5.92□□□□□ -1.46
LINC01560-201ENST00000357412 ERG28Q9UKR5 140 aa5.92□□□□□ -1.46
LINC01560-201ENST00000357412 M0R378 163 aa5.91□□□□□ -1.46
LINC01560-201ENST00000357412 IFITM2Q01629 132 aa5.91□□□□□ -1.46
LINC01560-201ENST00000357412 IGKV2D-26A0A0A0MRZ7 120 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 LOC100996750A0A140TA64 210 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 NDUFA6P56556 154 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 RPL24P83731 157 aaKnown RBP5.9□□□□□ -1.46
LINC01560-201ENST00000357412 COX17Q14061 63 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 FAM19A1Q7Z5A9 133 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 PLEKHB2Q96CS7 222 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 ZNF625Q96I27 306 aaPredicted RBP5.9□□□□□ -1.46
LINC01560-201ENST00000357412 KRTAP4-6Q9BYQ5 205 aa5.9□□□□□ -1.46
LINC01560-201ENST00000357412 LINC00614P0C842 121 aa5.89□□□□□ -1.47
LINC01560-201ENST00000357412 CTAG1AP78358 180 aa5.89□□□□□ -1.47
LINC01560-201ENST00000357412 TPRXLQ17RH7 258 aa5.89□□□□□ -1.47
LINC01560-201ENST00000357412 IGLV7-46A0A075B6I9 117 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 C11orf86A6NJI1 115 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 HBDP02042 147 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 PMCHL1Q16048 86 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 C10orf91Q5T1B1 145 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 C18orf32Q8TCD1 76 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
LINC01560-201ENST00000357412 BAGE3Q86Y29 109 aa5.87□□□□□ -1.47
LINC01560-201ENST00000357412 CBLN2Q8IUK8 224 aa5.87□□□□□ -1.47
LINC01560-201ENST00000357412 C3orf22Q8N5N4 141 aa5.87□□□□□ -1.47
LINC01560-201ENST00000357412 RPS10P5Q9NQ39 176 aa5.87□□□□□ -1.47
LINC01560-201ENST00000357412 RHEBQ15382 184 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 TMEM170BQ5T4T1 132 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 SFTA2Q6UW10 78 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 COMMD7Q86VX2 200 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 HIGD2AQ9BW72 106 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 TRAPPC1Q9Y5R8 145 aa5.86□□□□□ -1.47
LINC01560-201ENST00000357412 A0A0U1RRA0 63 aa5.84□□□□□ -1.47
LINC01560-201ENST00000357412 LINC00158P58513 81 aa5.84□□□□□ -1.47
LINC01560-201ENST00000357412 SPRR4Q96PI1 79 aa5.84□□□□□ -1.47
LINC01560-201ENST00000357412 PPDPFQ9H3Y8 114 aa5.84□□□□□ -1.47
LINC01560-201ENST00000357412 TMEM223A0PJW6 202 aa5.83□□□□□ -1.48
LINC01560-201ENST00000357412 SPAG11AQ6PDA7 123 aa5.83□□□□□ -1.48
LINC01560-201ENST00000357412 CHTOPQ9Y3Y2 248 aaKnown RBP5.83□□□□□ -1.48
LINC01560-201ENST00000357412 TRAV12-1A0A0B4J245 112 aa5.81□□□□□ -1.48
LINC01560-201ENST00000357412 SMIM13P0DJ93 91 aa5.81□□□□□ -1.48
LINC01560-201ENST00000357412 SPRR1AP35321 89 aa5.81□□□□□ -1.48
LINC01560-201ENST00000357412 KRTAP4-16G5E9R7 235 aaPredicted RBP5.8□□□□□ -1.48
LINC01560-201ENST00000357412 PRYO14603 147 aa5.8□□□□□ -1.48
LINC01560-201ENST00000357412 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
LINC01560-201ENST00000357412 BOD1L2Q8IYS8 172 aa5.8□□□□□ -1.48
LINC01560-201ENST00000357412 LINC00337Q8N6G1 96 aa5.8□□□□□ -1.48
LINC01560-201ENST00000357412 DAND5Q8N907 189 aa5.8□□□□□ -1.48
LINC01560-201ENST00000357412 KCNQ1DNQ9H478 68 aa5.8□□□□□ -1.48
LINC01560-201ENST00000357412 ZNF706Q9Y5V0 76 aaPredicted RBP5.8□□□□□ -1.48
LINC01560-201ENST00000357412 MIR7-3HGQ8N6C7 128 aa5.79□□□□□ -1.48
LINC01560-201ENST00000357412 Q8NBF4 154 aa5.79□□□□□ -1.48
LINC01560-201ENST00000357412 SMCR5Q8TEV8 140 aa5.79□□□□□ -1.48
LINC01560-201ENST00000357412 IFI27L1Q96BM0 104 aa5.79□□□□□ -1.48
LINC01560-201ENST00000357412 NCR3O14931 201 aa5.78□□□□□ -1.48
LINC01560-201ENST00000357412 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
LINC01560-201ENST00000357412 MEIG1Q5JSS6 88 aa5.78□□□□□ -1.48
LINC01560-201ENST00000357412 CHCHD1Q96BP2 118 aaKnown RBP5.78□□□□□ -1.48
LINC01560-201ENST00000357412 TRBV10-3A0A0K0K1G6 114 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 ATP6V1G1O75348 118 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 APOC3P02656 99 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 HERV-K104P63124 156 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 LINC00483Q53H64 154 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 YPEL4Q96NS1 127 aa5.77□□□□□ -1.49
LINC01560-201ENST00000357412 ETDCA0A1B0GVM5 59 aa5.76□□□□□ -1.49
LINC01560-201ENST00000357412 SPINK1P00995 79 aa5.76□□□□□ -1.49
LINC01560-201ENST00000357412 NDUFA12Q9UI09 145 aa5.76□□□□□ -1.49
LINC01560-201ENST00000357412 LINC00587B1AMM8 73 aa5.75□□□□□ -1.49
LINC01560-201ENST00000357412 ERC2-IT1O76042 136 aa5.75□□□□□ -1.49
LINC01560-201ENST00000357412 ASB16-AS1Q495Z4 193 aa5.75□□□□□ -1.49
LINC01560-201ENST00000357412 GAGE2AQ6NT46 116 aa5.75□□□□□ -1.49
LINC01560-201ENST00000357412 SVBPQ8N300 66 aa5.75□□□□□ -1.49
LINC01560-201ENST00000357412 LOC107984156A0A0G2JMH3 177 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 MYMXA0A1B0GTQ4 84 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 B5MCH6 92 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 SNAPINO95295 136 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 TSPEAR-AS2P59090 65 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 ARL17AQ8IVW1 177 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 FAM19A2Q8N3H0 131 aa5.74□□□□□ -1.49
LINC01560-201ENST00000357412 MAP1LC3CQ9BXW4 147 aa5.73□□□□□ -1.49
LINC01560-201ENST00000357412 KRTAP4-1Q9BYQ7 146 aa5.73□□□□□ -1.49
LINC01560-201ENST00000357412 KRTAP9-6A0A140TA67 174 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 HSBP1O75506 76 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 RPS29P62273 56 aaKnown RBP5.72□□□□□ -1.49
LINC01560-201ENST00000357412 MOBPQ13875 183 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 NDUFA5Q16718 116 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 SSBP3-AS1Q7Z2R9 100 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 Q9BRP9 147 aa5.72□□□□□ -1.49
LINC01560-201ENST00000357412 IGLV9-49A0A0B4J1Y8 123 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 TRBV10-2A0A0K0K1G8 114 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 H0Y8G0 127 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 LEPROTO15243 131 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 DDTP30046 118 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 S100A12P80511 92 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 Q8N377 158 aa5.71□□□□□ -1.5
LINC01560-201ENST00000357412 IGLV6-57P01721 117 aa5.7□□□□□ -1.5
LINC01560-201ENST00000357412 LINC00310P59036 64 aa5.7□□□□□ -1.5
LINC01560-201ENST00000357412 J3QQQ9 107 aa5.69□□□□□ -1.5
LINC01560-201ENST00000357412 LEPROTL1O95214 131 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms