RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
COL27A1-201ENST00000356083 FHL3Q13643 280 aa12.22□□□□□ -0.45
COL27A1-201ENST00000356083 MUC7Q8TAX7 377 aa12.22□□□□□ -0.45
COL27A1-201ENST00000356083 IGLV1-51P01701 117 aa12.21□□□□□ -0.45
COL27A1-201ENST00000356083 SMIM29Q86T20 159 aa12.21□□□□□ -0.46
COL27A1-201ENST00000356083 ADAMTSL4-AS1Q5T5F5 129 aa12.2□□□□□ -0.46
COL27A1-201ENST00000356083 P0C879 139 aa12.19□□□□□ -0.46
COL27A1-201ENST00000356083 USP9YO00507 2555 aaPredicted RBP12.19□□□□□ -0.46
COL27A1-201ENST00000356083 Q6ZSN1 163 aa12.18□□□□□ -0.46
COL27A1-201ENST00000356083 TMEM254Q8TBM7 123 aa12.18□□□□□ -0.46
COL27A1-201ENST00000356083 PHF5AQ7RTV0 110 aaKnown RBP12.18□□□□□ -0.46
COL27A1-201ENST00000356083 IGIPA6NJ69 53 aa12.17□□□□□ -0.46
COL27A1-201ENST00000356083 Q6ZPA2 131 aa12.17□□□□□ -0.46
COL27A1-201ENST00000356083 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
COL27A1-201ENST00000356083 C11orf1Q9H5F2 150 aa12.16□□□□□ -0.46
COL27A1-201ENST00000356083 LINC01554Q52M75 96 aa12.13□□□□□ -0.47
COL27A1-201ENST00000356083 Q8N2B8 174 aa12.13□□□□□ -0.47
COL27A1-201ENST00000356083 Q8N6K4 173 aa12.12□□□□□ -0.47
COL27A1-201ENST00000356083 EIF4EBP1Q13541 118 aaPredicted RBP12.12□□□□□ -0.47
COL27A1-201ENST00000356083 TSPEAR-AS2P59090 65 aa12.11□□□□□ -0.47
COL27A1-201ENST00000356083 RPL37AP61513 92 aaKnown RBP12.11□□□□□ -0.47
COL27A1-201ENST00000356083 ZNF295-AS1Q8N0V1 137 aa12.11□□□□□ -0.47
COL27A1-201ENST00000356083 CHD8Q9HCK8 2581 aa12.1□□□□□ -0.47
COL27A1-201ENST00000356083 RTL8CO15255 209 aa12.09□□□□□ -0.47
COL27A1-201ENST00000356083 LINC00846Q9NV44 126 aa12.08□□□□□ -0.48
COL27A1-201ENST00000356083 CDIP1Q9H305 208 aa12.08□□□□□ -0.48
COL27A1-201ENST00000356083 LINC00167Q96N53 147 aa12.07□□□□□ -0.48
COL27A1-201ENST00000356083 C9orf92A6NGG3 77 aa12.06□□□□□ -0.48
COL27A1-201ENST00000356083 EPG5Q9HCE0 2579 aa12.05□□□□□ -0.48
COL27A1-201ENST00000356083 A0A1B0GUV1 79 aa12.04□□□□□ -0.48
COL27A1-201ENST00000356083 C8orf87E5RJ46 101 aa12.04□□□□□ -0.48
COL27A1-201ENST00000356083 TP53AIP1Q9HCN2 124 aa12.03□□□□□ -0.48
COL27A1-201ENST00000356083 VPREB1P12018 145 aa12.03□□□□□ -0.48
COL27A1-201ENST00000356083 IGLV6-57P01721 117 aa12.02□□□□□ -0.48
COL27A1-201ENST00000356083 Q6ZRP5 223 aa12.02□□□□□ -0.48
COL27A1-201ENST00000356083 LINC00315P59091 139 aa12.02□□□□□ -0.49
COL27A1-201ENST00000356083 DNAH12Q6ZR08 3092 aa12.02□□□□□ -0.49
COL27A1-201ENST00000356083 CRIPTQ9P021 101 aa12.02□□□□□ -0.49
COL27A1-201ENST00000356083 F8WDY8 70 aa12.01□□□□□ -0.49
COL27A1-201ENST00000356083 C9orf129Q5T035 196 aaKnown RBP12□□□□□ -0.49
COL27A1-201ENST00000356083 C16orf95Q9H693 158 aa11.99□□□□□ -0.49
COL27A1-201ENST00000356083 CXCL6P80162 114 aa11.99□□□□□ -0.49
COL27A1-201ENST00000356083 SPATA3Q8NHX4 192 aa11.98□□□□□ -0.49
COL27A1-201ENST00000356083 FAM19A4Q96LR4 140 aa11.97□□□□□ -0.49
COL27A1-201ENST00000356083 C5orf42Q9H799 3197 aa11.97□□□□□ -0.49
COL27A1-201ENST00000356083 EPM2AB3EWF7 344 aa11.97□□□□□ -0.49
COL27A1-201ENST00000356083 LINC00476Q8WZB0 136 aa11.96□□□□□ -0.49
COL27A1-201ENST00000356083 LINC01600Q96MT4 127 aa11.96□□□□□ -0.49
COL27A1-201ENST00000356083 TRAV22A0A0B4J277 110 aa11.96□□□□□ -0.49
COL27A1-201ENST00000356083 SMR3BP02814 79 aaPredicted RBP11.96□□□□□ -0.5
COL27A1-201ENST00000356083 PCNTO95613 3336 aa11.96□□□□□ -0.5
COL27A1-201ENST00000356083 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
COL27A1-201ENST00000356083 WWC2-AS2Q96NR7 200 aa11.94□□□□□ -0.5
COL27A1-201ENST00000356083 AMELXQ99217 191 aa11.94□□□□□ -0.5
COL27A1-201ENST00000356083 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
COL27A1-201ENST00000356083 AKAP13Q12802 2813 aa11.93□□□□□ -0.5
COL27A1-201ENST00000356083 A0A0D9SG42 100 aa11.92□□□□□ -0.5
COL27A1-201ENST00000356083 C4orf26Q17RF5 130 aa11.92□□□□□ -0.5
COL27A1-201ENST00000356083 ST20-AS1Q8NBB2 130 aa11.91□□□□□ -0.5
COL27A1-201ENST00000356083 CRIP3Q6Q6R5 217 aa11.9□□□□□ -0.5
COL27A1-201ENST00000356083 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
COL27A1-201ENST00000356083 Q8NBF4 154 aa11.89□□□□□ -0.51
COL27A1-201ENST00000356083 HECTD1Q9ULT8 2610 aa11.89□□□□□ -0.51
COL27A1-201ENST00000356083 OBSCN-AS1Q96MR7 158 aa11.87□□□□□ -0.51
COL27A1-201ENST00000356083 NBDYA0A0U1RRE5 68 aa11.87□□□□□ -0.51
COL27A1-201ENST00000356083 IGLV5-37A0A075B6J1 123 aa11.86□□□□□ -0.51
COL27A1-201ENST00000356083 FAM168BA1KXE4 195 aa11.85□□□□□ -0.51
COL27A1-201ENST00000356083 K7EQZ3 153 aa11.85□□□□□ -0.51
COL27A1-201ENST00000356083 A0A1W2PPR1 153 aa11.85□□□□□ -0.51
COL27A1-201ENST00000356083 M0R2T5 61 aa11.82□□□□□ -0.52
COL27A1-201ENST00000356083 DSCR10P59022 87 aa11.82□□□□□ -0.52
COL27A1-201ENST00000356083 RBM12B-AS1Q9P1G2 102 aa11.8□□□□□ -0.52
COL27A1-201ENST00000356083 LINC01561Q8N1V8 128 aa11.8□□□□□ -0.52
COL27A1-201ENST00000356083 BCE1O60756 84 aa11.8□□□□□ -0.52
COL27A1-201ENST00000356083 ZNF575Q86XF7 245 aa11.79□□□□□ -0.52
COL27A1-201ENST00000356083 CSNK1G2-AS1Q8NCQ2 148 aa11.79□□□□□ -0.52
COL27A1-201ENST00000356083 MGAM2Q2M2H8 2515 aa11.79□□□□□ -0.52
COL27A1-201ENST00000356083 LINC00588Q9Y4M8 146 aa11.78□□□□□ -0.52
COL27A1-201ENST00000356083 TM2D3Q9BRN9 247 aa11.78□□□□□ -0.52
COL27A1-201ENST00000356083 LINC00304Q8N9R0 145 aa11.76□□□□□ -0.53
COL27A1-201ENST00000356083 Q6ZRX8 168 aa11.76□□□□□ -0.53
COL27A1-201ENST00000356083 URB1-AS1Q96HZ7 61 aa11.76□□□□□ -0.53
COL27A1-201ENST00000356083 ATRQ13535 2644 aa11.75□□□□□ -0.53
COL27A1-201ENST00000356083 TRBV7-4A0A0J9YYF1 115 aa11.75□□□□□ -0.53
COL27A1-201ENST00000356083 LUZP6Q538Z0 58 aa11.75□□□□□ -0.53
COL27A1-201ENST00000356083 KRTAP24-1Q3LI83 254 aa11.75□□□□□ -0.53
COL27A1-201ENST00000356083 Q6ZQT0 140 aa11.74□□□□□ -0.53
COL27A1-201ENST00000356083 LAMA2P24043 3122 aaKnown RBP11.74□□□□□ -0.53
COL27A1-201ENST00000356083 CFAP46Q8IYW2 2715 aa11.74□□□□□ -0.53
COL27A1-201ENST00000356083 PRO0628Q9UI54 55 aa11.73□□□□□ -0.53
COL27A1-201ENST00000356083 MUC22E2RYF6 1773 aaPredicted RBP11.73□□□□□ -0.53
COL27A1-201ENST00000356083 MAST4O15021 2626 aa11.72□□□□□ -0.53
COL27A1-201ENST00000356083 UQCR11O14957 56 aa11.72□□□□□ -0.53
COL27A1-201ENST00000356083 CFAP54Q96N23 3096 aa11.72□□□□□ -0.53
COL27A1-201ENST00000356083 IGHV3OR16-9A0A0B4J2B5 98 aa11.72□□□□□ -0.53
COL27A1-201ENST00000356083 IGLV5-39A0A0G2JS06 123 aa11.72□□□□□ -0.53
COL27A1-201ENST00000356083 ELOF1P60002 83 aaKnown RBP11.72□□□□□ -0.53
COL27A1-201ENST00000356083 C11orf72Q8NBR9 251 aa11.71□□□□□ -0.54
COL27A1-201ENST00000356083 MIR22HGQ0VDD5 57 aa11.7□□□□□ -0.54
COL27A1-201ENST00000356083 MRPL34Q9BQ48 92 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms