RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 LINC01546A6NGU7 62 aa9.09□□□□□ -0.95
SCN8A-202ENST00000355133 CXCL6P80162 114 aa9.07□□□□□ -0.96
SCN8A-202ENST00000355133 C7orf65Q6ZTY9 151 aa9.07□□□□□ -0.96
SCN8A-202ENST00000355133 EP400Q96L91 3159 aa9.07□□□□□ -0.96
SCN8A-202ENST00000355133 CHTF8P0CG12 524 aa9.07□□□□□ -0.96
SCN8A-202ENST00000355133 SETD2Q9BYW2 2564 aaPredicted RBP9.06□□□□□ -0.96
SCN8A-202ENST00000355133 hDV103S1A0JD37 113 aa9.06□□□□□ -0.96
SCN8A-202ENST00000355133 MUC4Q99102 2169 aa9.06□□□□□ -0.96
SCN8A-202ENST00000355133 CEP295Q9C0D2 2601 aa9.06□□□□□ -0.96
SCN8A-202ENST00000355133 RTL8CO15255 209 aa9.06□□□□□ -0.96
SCN8A-202ENST00000355133 ANKRD11Q6UB99 2663 aaPredicted RBP9.05□□□□□ -0.96
SCN8A-202ENST00000355133 H3BNG1 76 aa9.04□□□□□ -0.96
SCN8A-202ENST00000355133 FAM218AQ96MZ4 157 aa9.04□□□□□ -0.96
SCN8A-202ENST00000355133 NBDYA0A0U1RRE5 68 aa9.03□□□□□ -0.96
SCN8A-202ENST00000355133 LINC00588Q9Y4M8 146 aa9.03□□□□□ -0.96
SCN8A-202ENST00000355133 ELOF1P60002 83 aaKnown RBP9.02□□□□□ -0.97
SCN8A-202ENST00000355133 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
SCN8A-202ENST00000355133 Q8NAQ8 132 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 PTPRBP23467 1997 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 CDIP1Q9H305 208 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 COL4A2P08572 1712 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 EPM2AB3EWF7 344 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 FAM229AH3BQW9 127 aa9.01□□□□□ -0.97
SCN8A-202ENST00000355133 ST20-AS1Q8NBB2 130 aa9□□□□□ -0.97
SCN8A-202ENST00000355133 LINC00476Q8WZB0 136 aa9□□□□□ -0.97
SCN8A-202ENST00000355133 C16orf90A8MZG2 172 aa9□□□□□ -0.97
SCN8A-202ENST00000355133 Q6ZRX8 168 aa8.99□□□□□ -0.97
SCN8A-202ENST00000355133 USP9YO00507 2555 aaPredicted RBP8.99□□□□□ -0.97
SCN8A-202ENST00000355133 ZNF462Q96JM2 2506 aa8.98□□□□□ -0.97
SCN8A-202ENST00000355133 TYMSOSQ8TAI1 123 aa8.98□□□□□ -0.97
SCN8A-202ENST00000355133 Q6ZRP5 223 aa8.97□□□□□ -0.97
SCN8A-202ENST00000355133 CHD8Q9HCK8 2581 aa8.97□□□□□ -0.97
SCN8A-202ENST00000355133 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.97
SCN8A-202ENST00000355133 Q8NBF4 154 aa8.96□□□□□ -0.97
SCN8A-202ENST00000355133 TP53AIP1Q9HCN2 124 aa8.96□□□□□ -0.97
SCN8A-202ENST00000355133 COL27A1Q8IZC6 1860 aaPredicted RBP8.95□□□□□ -0.98
SCN8A-202ENST00000355133 PKD1L2Q7Z442 2459 aa8.95□□□□□ -0.98
SCN8A-202ENST00000355133 RPL37AP61513 92 aaKnown RBP8.95□□□□□ -0.98
SCN8A-202ENST00000355133 A0A1B0GU69 56 aa8.95□□□□□ -0.98
SCN8A-202ENST00000355133 LINC00313P59037 77 aa8.94□□□□□ -0.98
SCN8A-202ENST00000355133 Q6ZQT0 140 aa8.94□□□□□ -0.98
SCN8A-202ENST00000355133 ACYP2P14621 99 aa8.93□□□□□ -0.98
SCN8A-202ENST00000355133 CENPFP49454 3210 aa8.93□□□□□ -0.98
SCN8A-202ENST00000355133 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
SCN8A-202ENST00000355133 FAM168BA1KXE4 195 aa8.93□□□□□ -0.98
SCN8A-202ENST00000355133 SPTBN4Q9H254 2564 aa8.91□□□□□ -0.98
SCN8A-202ENST00000355133 BCE1O60756 84 aa8.91□□□□□ -0.98
SCN8A-202ENST00000355133 WWC2-AS2Q96NR7 200 aa8.91□□□□□ -0.98
SCN8A-202ENST00000355133 Q96NJ1 140 aa8.9□□□□□ -0.99
SCN8A-202ENST00000355133 SPAG11AQ6PDA7 123 aa8.9□□□□□ -0.99
SCN8A-202ENST00000355133 MTORP42345 2549 aa8.89□□□□□ -0.99
SCN8A-202ENST00000355133 LOC110117498A0A087WWA1 95 aa8.89□□□□□ -0.99
SCN8A-202ENST00000355133 A0A1B0GW54 56 aa8.87□□□□□ -0.99
SCN8A-202ENST00000355133 DNAH10OSP0CZ25 163 aa8.87□□□□□ -0.99
SCN8A-202ENST00000355133 PRO0461Q9UI25 63 aa8.87□□□□□ -0.99
SCN8A-202ENST00000355133 SERTAD4-AS1Q5TG53 156 aa8.86□□□□□ -0.99
SCN8A-202ENST00000355133 VPREB1P12018 145 aa8.85□□□□□ -0.99
SCN8A-202ENST00000355133 IGLV8-61A0A075B6I0 122 aa8.85□□□□□ -0.99
SCN8A-202ENST00000355133 KRTAP10-11P60412 298 aa8.85□□□□□ -0.99
SCN8A-202ENST00000355133 POLQO75417 2590 aa8.85□□□□□ -0.99
SCN8A-202ENST00000355133 TRAV22A0A0B4J277 110 aa8.85□□□□□ -0.99
SCN8A-202ENST00000355133 PLA2G1BP04054 148 aaKnown RBP8.85□□□□□ -0.99
SCN8A-202ENST00000355133 TM2D3Q9BRN9 247 aa8.84□□□□□ -0.99
SCN8A-202ENST00000355133 J3QL48 77 aa8.83□□□□□ -1
SCN8A-202ENST00000355133 ATP11AUNQ6ZP68 121 aa8.83□□□□□ -1
SCN8A-202ENST00000355133 LITAFQ99732 161 aa8.83□□□□□ -1
SCN8A-202ENST00000355133 IGLV6-57P01721 117 aa8.82□□□□□ -1
SCN8A-202ENST00000355133 K7EIL1 84 aa8.82□□□□□ -1
SCN8A-202ENST00000355133 CSNK1G2-AS1Q8NCQ2 148 aa8.82□□□□□ -1
SCN8A-202ENST00000355133 KLK9Q2XQG4 91 aa8.81□□□□□ -1
SCN8A-202ENST00000355133 FASNP49327 2511 aaKnown RBP8.81□□□□□ -1
SCN8A-202ENST00000355133 ANKRD17O75179 2603 aaKnown RBP8.8□□□□□ -1
SCN8A-202ENST00000355133 H3BPC8 53 aa8.8□□□□□ -1
SCN8A-202ENST00000355133 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
SCN8A-202ENST00000355133 TRBV7-4A0A0J9YYF1 115 aa8.8□□□□□ -1
SCN8A-202ENST00000355133 ACANP16112 2415 aa8.8□□□□□ -1
SCN8A-202ENST00000355133 K7EQZ3 153 aa8.78□□□□□ -1
SCN8A-202ENST00000355133 A8MWP4 228 aa8.78□□□□□ -1
SCN8A-202ENST00000355133 KRTAP10-3P60369 221 aa8.76□□□□□ -1.01
SCN8A-202ENST00000355133 C4orf26Q17RF5 130 aa8.76□□□□□ -1.01
SCN8A-202ENST00000355133 MRPL34Q9BQ48 92 aaKnown RBP8.75□□□□□ -1.01
SCN8A-202ENST00000355133 C8orf87E5RJ46 101 aa8.75□□□□□ -1.01
SCN8A-202ENST00000355133 PCSK5Q92824 1860 aa8.74□□□□□ -1.01
SCN8A-202ENST00000355133 KCNQ1DNQ9H478 68 aa8.74□□□□□ -1.01
SCN8A-202ENST00000355133 LOC101927531A0A1B0GV80 90 aa8.74□□□□□ -1.01
SCN8A-202ENST00000355133 DSCR10P59022 87 aa8.74□□□□□ -1.01
SCN8A-202ENST00000355133 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
SCN8A-202ENST00000355133 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
SCN8A-202ENST00000355133 IGFL1Q6UW32 110 aa8.72□□□□□ -1.01
SCN8A-202ENST00000355133 PRO0628Q9UI54 55 aa8.72□□□□□ -1.01
SCN8A-202ENST00000355133 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
SCN8A-202ENST00000355133 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
SCN8A-202ENST00000355133 EIF4EBP3O60516 100 aaPredicted RBP8.71□□□□□ -1.01
SCN8A-202ENST00000355133 LINC00528Q8N1L1 170 aa8.71□□□□□ -1.01
SCN8A-202ENST00000355133 C9orf92A6NGG3 77 aa8.71□□□□□ -1.02
SCN8A-202ENST00000355133 A0A096LNT2 108 aa8.7□□□□□ -1.02
SCN8A-202ENST00000355133 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
SCN8A-202ENST00000355133 A0A1W2PNN7 141 aa8.7□□□□□ -1.02
SCN8A-202ENST00000355133 GIG44P09565 113 aaPredicted RBP8.7□□□□□ -1.02
SCN8A-202ENST00000355133 C9orf129Q5T035 196 aaKnown RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms