RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 LMO4P61968 165 aa8.93□□□□□ -0.98
COL6A3-203ENST00000353578 A0A096LNI7 61 aa8.92□□□□□ -0.98
COL6A3-203ENST00000353578 PROK1P58294 105 aa8.92□□□□□ -0.98
COL6A3-203ENST00000353578 LINC01600Q96MT4 127 aa8.92□□□□□ -0.98
COL6A3-203ENST00000353578 MDFIQ99750 246 aa8.92□□□□□ -0.98
COL6A3-203ENST00000353578 COA5Q86WW8 74 aa8.9□□□□□ -0.98
COL6A3-203ENST00000353578 LY6G6DO95868 133 aa8.9□□□□□ -0.98
COL6A3-203ENST00000353578 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
COL6A3-203ENST00000353578 BBC3Q96PG8 261 aaPredicted RBP8.9□□□□□ -0.98
COL6A3-203ENST00000353578 IGHV3OR16-9A0A0B4J2B5 98 aa8.9□□□□□ -0.99
COL6A3-203ENST00000353578 KIF25-AS1Q9Y6Z4 181 aa8.89□□□□□ -0.99
COL6A3-203ENST00000353578 MSMPQ1L6U9 139 aa8.88□□□□□ -0.99
COL6A3-203ENST00000353578 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.88□□□□□ -0.99
COL6A3-203ENST00000353578 EDN2P20800 178 aa8.88□□□□□ -0.99
COL6A3-203ENST00000353578 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
COL6A3-203ENST00000353578 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
COL6A3-203ENST00000353578 FAM229AH3BQW9 127 aa8.86□□□□□ -0.99
COL6A3-203ENST00000353578 MIR22HGQ0VDD5 57 aa8.86□□□□□ -0.99
COL6A3-203ENST00000353578 A8MUN3 132 aa8.85□□□□□ -0.99
COL6A3-203ENST00000353578 A8MWP4 228 aa8.85□□□□□ -0.99
COL6A3-203ENST00000353578 Q6ZRX8 168 aa8.85□□□□□ -0.99
COL6A3-203ENST00000353578 FAM218AQ96MZ4 157 aa8.85□□□□□ -0.99
COL6A3-203ENST00000353578 FHL3Q13643 280 aa8.85□□□□□ -0.99
COL6A3-203ENST00000353578 DEFB4AO15263 64 aa8.84□□□□□ -0.99
COL6A3-203ENST00000353578 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
COL6A3-203ENST00000353578 GVQW2A0A096LPI5 108 aaPredicted RBP8.83□□□□□ -1
COL6A3-203ENST00000353578 IGLV6-57P01721 117 aa8.81□□□□□ -1
COL6A3-203ENST00000353578 ADORA2A-AS1P86434 159 aa8.8□□□□□ -1
COL6A3-203ENST00000353578 IGLV4-60A0A075B6I1 120 aa8.8□□□□□ -1
COL6A3-203ENST00000353578 KIAA0087Q14695 138 aa8.8□□□□□ -1
COL6A3-203ENST00000353578 LITAFQ99732 161 aa8.79□□□□□ -1
COL6A3-203ENST00000353578 SSBP3-AS1Q7Z2R9 100 aa8.79□□□□□ -1
COL6A3-203ENST00000353578 AVPP01185 164 aa8.79□□□□□ -1
COL6A3-203ENST00000353578 C11orf71Q6IPW1 123 aa8.79□□□□□ -1
COL6A3-203ENST00000353578 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
COL6A3-203ENST00000353578 PLA2G5P39877 138 aa8.79□□□□□ -1
COL6A3-203ENST00000353578 GRNP28799 593 aaKnown RBP8.79□□□□□ -1
COL6A3-203ENST00000353578 Q6ZRU5 148 aa8.78□□□□□ -1
COL6A3-203ENST00000353578 WISP2O76076 250 aa8.78□□□□□ -1
COL6A3-203ENST00000353578 Q75L30 129 aa8.78□□□□□ -1
COL6A3-203ENST00000353578 PRLHP81277 87 aa8.77□□□□□ -1.01
COL6A3-203ENST00000353578 RBM12B-AS1Q9P1G2 102 aa8.77□□□□□ -1.01
COL6A3-203ENST00000353578 SPINK1P00995 79 aa8.77□□□□□ -1.01
COL6A3-203ENST00000353578 ASB16-AS1Q495Z4 193 aa8.77□□□□□ -1.01
COL6A3-203ENST00000353578 COL4A2P08572 1712 aa8.76□□□□□ -1.01
COL6A3-203ENST00000353578 CIRBP-AS1Q8TBR5 109 aa8.76□□□□□ -1.01
COL6A3-203ENST00000353578 LINC00315P59091 139 aa8.75□□□□□ -1.01
COL6A3-203ENST00000353578 J3QKU1 62 aa8.75□□□□□ -1.01
COL6A3-203ENST00000353578 Q9UF83 564 aa8.75□□□□□ -1.01
COL6A3-203ENST00000353578 LINC01006Q8NI28 216 aa8.74□□□□□ -1.01
COL6A3-203ENST00000353578 H3BNG1 76 aa8.74□□□□□ -1.01
COL6A3-203ENST00000353578 IGKV2D-30A0A075B6S6 120 aa8.74□□□□□ -1.01
COL6A3-203ENST00000353578 IGKV2-30P06310 120 aa8.74□□□□□ -1.01
COL6A3-203ENST00000353578 EPM2AB3EWF7 344 aa8.74□□□□□ -1.01
COL6A3-203ENST00000353578 LINC01554Q52M75 96 aa8.73□□□□□ -1.01
COL6A3-203ENST00000353578 X6R8D5 127 aa8.73□□□□□ -1.01
COL6A3-203ENST00000353578 LINC00167Q96N53 147 aa8.73□□□□□ -1.01
COL6A3-203ENST00000353578 ODF3L2Q3SX64 289 aa8.73□□□□□ -1.01
COL6A3-203ENST00000353578 IGLV1-51P01701 117 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 LUZP6Q538Z0 58 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 H3BS24 57 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 Q6ZRP5 223 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 OBSCN-AS1Q96MR7 158 aa8.72□□□□□ -1.01
COL6A3-203ENST00000353578 NUPR2A6NF83 97 aa8.71□□□□□ -1.01
COL6A3-203ENST00000353578 FSHBP01225 129 aa8.71□□□□□ -1.01
COL6A3-203ENST00000353578 PLA2G2AP14555 144 aa8.71□□□□□ -1.01
COL6A3-203ENST00000353578 LINC00476Q8WZB0 136 aa8.7□□□□□ -1.02
COL6A3-203ENST00000353578 LYPD5Q6UWN5 251 aa8.7□□□□□ -1.02
COL6A3-203ENST00000353578 A8MTW9 85 aa8.69□□□□□ -1.02
COL6A3-203ENST00000353578 LINC01556Q5JQF7 62 aa8.68□□□□□ -1.02
COL6A3-203ENST00000353578 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
COL6A3-203ENST00000353578 LINC00313P59037 77 aa8.67□□□□□ -1.02
COL6A3-203ENST00000353578 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
COL6A3-203ENST00000353578 KLK9Q2XQG4 91 aa8.65□□□□□ -1.03
COL6A3-203ENST00000353578 K7EQZ3 153 aa8.64□□□□□ -1.03
COL6A3-203ENST00000353578 Q6ZSN1 163 aa8.64□□□□□ -1.03
COL6A3-203ENST00000353578 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
COL6A3-203ENST00000353578 DEFB116Q30KQ4 102 aa8.64□□□□□ -1.03
COL6A3-203ENST00000353578 KCNQ1DNQ9H478 68 aa8.63□□□□□ -1.03
COL6A3-203ENST00000353578 Q8NA96 180 aa8.62□□□□□ -1.03
COL6A3-203ENST00000353578 A0A0A0MQY5 61 aa8.62□□□□□ -1.03
COL6A3-203ENST00000353578 CENPEQ02224 2701 aa8.62□□□□□ -1.03
COL6A3-203ENST00000353578 AKAP13Q12802 2813 aa8.61□□□□□ -1.03
COL6A3-203ENST00000353578 BPTFQ12830 3046 aa8.61□□□□□ -1.03
COL6A3-203ENST00000353578 Q5XG85 94 aa8.6□□□□□ -1.03
COL6A3-203ENST00000353578 NBEAL1Q6ZS30 2694 aa8.59□□□□□ -1.03
COL6A3-203ENST00000353578 OCR1Q9BZK8 76 aa8.59□□□□□ -1.03
COL6A3-203ENST00000353578 LINC00528Q8N1L1 170 aa8.59□□□□□ -1.03
COL6A3-203ENST00000353578 C16orf90A8MZG2 172 aa8.58□□□□□ -1.04
COL6A3-203ENST00000353578 C16orf95Q9H693 158 aa8.57□□□□□ -1.04
COL6A3-203ENST00000353578 PRO3102Q9H379 93 aa8.55□□□□□ -1.04
COL6A3-203ENST00000353578 IGLV5-52A0A0A0MRZ9 124 aa8.55□□□□□ -1.04
COL6A3-203ENST00000353578 A0A1B0GVX0 72 aa8.54□□□□□ -1.04
COL6A3-203ENST00000353578 CDSNQ15517 529 aa8.53□□□□□ -1.04
COL6A3-203ENST00000353578 PLA2G2DQ9UNK4 145 aa8.53□□□□□ -1.04
COL6A3-203ENST00000353578 CHTF8P0CG12 524 aa8.51□□□□□ -1.05
COL6A3-203ENST00000353578 C10orf99Q6UWK7 81 aa8.5□□□□□ -1.05
COL6A3-203ENST00000353578 A0A1W2PNU3 283 aaPredicted RBP8.5□□□□□ -1.05
COL6A3-203ENST00000353578 EIF4EBP3O60516 100 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms