RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 A0A0J9YWU9 116 aa5.87□□□□□ -1.47
TRIM55-204ENST00000353317 DAD1P61803 113 aa5.87□□□□□ -1.47
TRIM55-204ENST00000353317 CLPSL2Q6UWE3 100 aa5.87□□□□□ -1.47
TRIM55-204ENST00000353317 C2orf48Q96LS8 159 aa5.87□□□□□ -1.47
TRIM55-204ENST00000353317 IGKV3D-7A0A0C4DH55 119 aa5.86□□□□□ -1.47
TRIM55-204ENST00000353317 SPART-AS1P0CW21 52 aa5.86□□□□□ -1.47
TRIM55-204ENST00000353317 GYPEP15421 78 aa5.86□□□□□ -1.47
TRIM55-204ENST00000353317 PRR3P79522 188 aaKnown RBP5.86□□□□□ -1.47
TRIM55-204ENST00000353317 HTN3P15516 51 aa5.86□□□□□ -1.47
TRIM55-204ENST00000353317 COX7CP15954 63 aa5.86□□□□□ -1.47
TRIM55-204ENST00000353317 NANOS2P60321 138 aaKnown RBP5.85□□□□□ -1.47
TRIM55-204ENST00000353317 Q8IZM0 81 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 ORMDL1Q9P0S3 153 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 CSMD3Q7Z407 3707 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 A0A1B0GUV1 79 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 Q6ZTC4 211 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 TM2D3Q9BRN9 247 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 PRO0255Q9UI72 69 aa5.85□□□□□ -1.47
TRIM55-204ENST00000353317 A0A087WVE0 104 aa5.84□□□□□ -1.47
TRIM55-204ENST00000353317 ATOX1O00244 68 aa5.84□□□□□ -1.47
TRIM55-204ENST00000353317 LYSTQ99698 3801 aa5.84□□□□□ -1.47
TRIM55-204ENST00000353317 Q6JHZ5 121 aa5.84□□□□□ -1.47
TRIM55-204ENST00000353317 RPL18AQ02543 176 aaKnown RBP5.83□□□□□ -1.48
TRIM55-204ENST00000353317 LINC01561Q8N1V8 128 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 Q8N3U1 123 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 CRYGAP11844 174 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 Q8N814 137 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 LINC00167Q96N53 147 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
TRIM55-204ENST00000353317 TENM2Q9NT68 2774 aa5.82□□□□□ -1.48
TRIM55-204ENST00000353317 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
TRIM55-204ENST00000353317 A0A1B0GX51 115 aa5.82□□□□□ -1.48
TRIM55-204ENST00000353317 CCKP06307 115 aa5.82□□□□□ -1.48
TRIM55-204ENST00000353317 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
TRIM55-204ENST00000353317 LINC00269Q8N2A0 174 aa5.82□□□□□ -1.48
TRIM55-204ENST00000353317 hADV29S1A0JD25 119 aa5.81□□□□□ -1.48
TRIM55-204ENST00000353317 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
TRIM55-204ENST00000353317 Q8NDZ9 215 aa5.81□□□□□ -1.48
TRIM55-204ENST00000353317 NDUFC2O95298 119 aa5.8□□□□□ -1.48
TRIM55-204ENST00000353317 CD164L2Q6UWJ8 174 aa5.8□□□□□ -1.48
TRIM55-204ENST00000353317 LOC107984640A0A0U1RRK4 108 aa5.8□□□□□ -1.48
TRIM55-204ENST00000353317 TMEM256-PLSCR3K7ERE1 68 aa5.8□□□□□ -1.48
TRIM55-204ENST00000353317 COX17Q14061 63 aa5.8□□□□□ -1.48
TRIM55-204ENST00000353317 USP17L23D6RBM5 183 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 JMJD7-PLA2G4BH0Y9G9 81 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 C6orf99Q4VX62 202 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 C11orf45Q8TAV5 145 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 CHCHD10Q8WYQ3 142 aaPredicted RBP5.79□□□□□ -1.48
TRIM55-204ENST00000353317 CFAP161Q6P656 301 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 SERP2Q8N6R1 65 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 DNAH7Q8WXX0 4024 aa5.79□□□□□ -1.48
TRIM55-204ENST00000353317 ANGP03950 147 aaKnown RBP5.78□□□□□ -1.48
TRIM55-204ENST00000353317 REG3AQ06141 175 aa5.78□□□□□ -1.48
TRIM55-204ENST00000353317 UPK3BQ9BT76 320 aa5.78□□□□□ -1.48
TRIM55-204ENST00000353317 TGP01266 2768 aa5.78□□□□□ -1.48
TRIM55-204ENST00000353317 DEFB131BA0A096LNP1 70 aa5.77□□□□□ -1.49
TRIM55-204ENST00000353317 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
TRIM55-204ENST00000353317 C10orf25Q5T742 122 aa5.77□□□□□ -1.49
TRIM55-204ENST00000353317 LYPD5Q6UWN5 251 aa5.77□□□□□ -1.49
TRIM55-204ENST00000353317 C6orf223Q8N319 242 aa5.77□□□□□ -1.49
TRIM55-204ENST00000353317 LINC00575Q6W349 94 aa5.76□□□□□ -1.49
TRIM55-204ENST00000353317 FAM19A1Q7Z5A9 133 aa5.76□□□□□ -1.49
TRIM55-204ENST00000353317 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
TRIM55-204ENST00000353317 J3KT08 172 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 ESRGQ1W209 222 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 ENHOQ6UWT2 76 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 UNQ6190/PRO20217Q6UXQ8 127 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 B9D2Q9BPU9 175 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 DYNC2H1Q8NCM8 4307 aaKnown RBP5.75□□□□□ -1.49
TRIM55-204ENST00000353317 TRAV23DV6A0A075B6W5 121 aa5.75□□□□□ -1.49
TRIM55-204ENST00000353317 STARD9Q9P2P6 4700 aa5.74□□□□□ -1.49
TRIM55-204ENST00000353317 PLECQ15149 4684 aaKnown RBP5.74□□□□□ -1.49
TRIM55-204ENST00000353317 ATP5EP2Q5VTU8 51 aa5.74□□□□□ -1.49
TRIM55-204ENST00000353317 WFDC10BQ8IUB3 73 aa5.74□□□□□ -1.49
TRIM55-204ENST00000353317 UBL5Q9BZL1 73 aa5.74□□□□□ -1.49
TRIM55-204ENST00000353317 M0R2N4 97 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 RBM3P98179 157 aaKnown RBP5.73□□□□□ -1.49
TRIM55-204ENST00000353317 SPAG11BQ08648 103 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 Q6ZQT0 140 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 FAM19A5Q7Z5A7 132 aaPredicted RBP5.73□□□□□ -1.49
TRIM55-204ENST00000353317 H3BNG1 76 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 GHRHP01286 108 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 TMEM258P61165 79 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 RPS28P62857 69 aaKnown RBP5.73□□□□□ -1.49
TRIM55-204ENST00000353317 LELP1Q5T871 98 aa5.73□□□□□ -1.49
TRIM55-204ENST00000353317 IGLV6-57P01721 117 aa5.72□□□□□ -1.49
TRIM55-204ENST00000353317 DPH3Q96FX2 82 aa5.72□□□□□ -1.49
TRIM55-204ENST00000353317 DNAH1Q9P2D7 4330 aa5.72□□□□□ -1.49
TRIM55-204ENST00000353317 ZNF561-AS1K7EIQ3 104 aa5.72□□□□□ -1.49
TRIM55-204ENST00000353317 LAMTOR3Q9UHA4 124 aa5.72□□□□□ -1.49
TRIM55-204ENST00000353317 TRBV10-3A0A0K0K1G6 114 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 LOC110117498A0A087WWA1 95 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 TRAV10A0A0B4J240 114 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 Q6ZQY7 126 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 DSCR8Q96T75 97 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 KLK12Q9UKR0 248 aa5.71□□□□□ -1.5
TRIM55-204ENST00000353317 PRR34Q9NV39 138 aa5.7□□□□□ -1.5
TRIM55-204ENST00000353317 MUC7Q8TAX7 377 aa5.7□□□□□ -1.5
TRIM55-204ENST00000353317 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
TRIM55-204ENST00000353317 OXTP01178 125 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms