RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
SCARF1-202ENST00000348987 RBM3P98179 157 aaKnown RBP12.83□□□□□ -0.36
SCARF1-202ENST00000348987 C6orf99Q4VX62 202 aa12.83□□□□□ -0.36
SCARF1-202ENST00000348987 CSNK1G2-AS1Q8NCQ2 148 aa12.83□□□□□ -0.36
SCARF1-202ENST00000348987 FP248Q71RG6 208 aaPredicted RBP12.82□□□□□ -0.36
SCARF1-202ENST00000348987 TENM1Q9UKZ4 2725 aa12.82□□□□□ -0.36
SCARF1-202ENST00000348987 F8WEM9 126 aa12.82□□□□□ -0.36
SCARF1-202ENST00000348987 IGLV1-51P01701 117 aa12.82□□□□□ -0.36
SCARF1-202ENST00000348987 LINC00482Q8N8I6 264 aa12.81□□□□□ -0.36
SCARF1-202ENST00000348987 C16orf74Q96GX8 76 aa12.81□□□□□ -0.36
SCARF1-202ENST00000348987 C16orf95Q9H693 158 aa12.81□□□□□ -0.36
SCARF1-202ENST00000348987 CLPSL2Q6UWE3 100 aa12.8□□□□□ -0.36
SCARF1-202ENST00000348987 LAMTOR3Q9UHA4 124 aa12.8□□□□□ -0.36
SCARF1-202ENST00000348987 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
SCARF1-202ENST00000348987 Q6ZVQ6 151 aa12.79□□□□□ -0.36
SCARF1-202ENST00000348987 BCE1O60756 84 aa12.79□□□□□ -0.36
SCARF1-202ENST00000348987 Q8IZM0 81 aa12.79□□□□□ -0.36
SCARF1-202ENST00000348987 Q8NDZ9 215 aa12.77□□□□□ -0.36
SCARF1-202ENST00000348987 SMIM26A0A096LP01 95 aa12.77□□□□□ -0.37
SCARF1-202ENST00000348987 LINC00575Q6W349 94 aa12.77□□□□□ -0.37
SCARF1-202ENST00000348987 C9orf116Q5BN46 136 aaPredicted RBP12.76□□□□□ -0.37
SCARF1-202ENST00000348987 LINC00474Q9P2X8 69 aa12.76□□□□□ -0.37
SCARF1-202ENST00000348987 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 LOC110117498A0A087WWA1 95 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 ZNF561-AS1K7EIQ3 104 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 KRTAP10-3P60369 221 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 Q8N3U1 123 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 SPATA3Q8NHX4 192 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 TM2D3Q9BRN9 247 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 PKIGQ9Y2B9 76 aa12.75□□□□□ -0.37
SCARF1-202ENST00000348987 ATRQ13535 2644 aa12.73□□□□□ -0.37
SCARF1-202ENST00000348987 TRRAPQ9Y4A5 3859 aa12.73□□□□□ -0.37
SCARF1-202ENST00000348987 TRBV7-6A0A0J9YX20 115 aa12.73□□□□□ -0.37
SCARF1-202ENST00000348987 SCXQ7RTU7 201 aa12.73□□□□□ -0.37
SCARF1-202ENST00000348987 C6orf223Q8N319 242 aa12.73□□□□□ -0.37
SCARF1-202ENST00000348987 NSD1Q96L73 2696 aaPredicted RBP12.72□□□□□ -0.37
SCARF1-202ENST00000348987 HIVEP1P15822 2718 aa12.71□□□□□ -0.38
SCARF1-202ENST00000348987 CMC4P56277 68 aaPredicted RBP12.7□□□□□ -0.38
SCARF1-202ENST00000348987 KIAA0087Q14695 138 aa12.7□□□□□ -0.38
SCARF1-202ENST00000348987 LINC00269Q8N2A0 174 aa12.7□□□□□ -0.38
SCARF1-202ENST00000348987 CXCL6P80162 114 aa12.69□□□□□ -0.38
SCARF1-202ENST00000348987 Q6ZQY7 126 aa12.69□□□□□ -0.38
SCARF1-202ENST00000348987 A0A096LPF7 62 aa12.68□□□□□ -0.38
SCARF1-202ENST00000348987 COX17Q14061 63 aa12.68□□□□□ -0.38
SCARF1-202ENST00000348987 TRBV7-4A0A0J9YYF1 115 aa12.67□□□□□ -0.38
SCARF1-202ENST00000348987 IGLV10-54A0A075B6I4 117 aa12.66□□□□□ -0.38
SCARF1-202ENST00000348987 MIFP14174 115 aa12.66□□□□□ -0.38
SCARF1-202ENST00000348987 GYPEP15421 78 aa12.65□□□□□ -0.38
SCARF1-202ENST00000348987 BRK1Q8WUW1 75 aa12.65□□□□□ -0.38
SCARF1-202ENST00000348987 NDUFC1O43677 76 aa12.64□□□□□ -0.39
SCARF1-202ENST00000348987 MUC7Q8TAX7 377 aa12.64□□□□□ -0.39
SCARF1-202ENST00000348987 A0A1B0GUV1 79 aa12.63□□□□□ -0.39
SCARF1-202ENST00000348987 INAFM1C9JVW0 142 aa12.63□□□□□ -0.39
SCARF1-202ENST00000348987 C9orf66Q5T8R8 295 aa12.63□□□□□ -0.39
SCARF1-202ENST00000348987 DEFB4AO15263 64 aa12.62□□□□□ -0.39
SCARF1-202ENST00000348987 NREPQ16612 68 aa12.62□□□□□ -0.39
SCARF1-202ENST00000348987 IGHV4-28A0A0C4DH34 117 aa12.61□□□□□ -0.39
SCARF1-202ENST00000348987 FAM229BQ4G0N7 80 aa12.61□□□□□ -0.39
SCARF1-202ENST00000348987 X6R8D5 127 aa12.61□□□□□ -0.39
SCARF1-202ENST00000348987 PDE6GP18545 87 aa12.61□□□□□ -0.39
SCARF1-202ENST00000348987 A0A0U1RQV1 116 aa12.6□□□□□ -0.39
SCARF1-202ENST00000348987 CD164L2Q6UWJ8 174 aa12.6□□□□□ -0.39
SCARF1-202ENST00000348987 TMEM254Q8TBM7 123 aa12.6□□□□□ -0.39
SCARF1-202ENST00000348987 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
SCARF1-202ENST00000348987 MPLKIPQ8TAP9 179 aa12.6□□□□□ -0.39
SCARF1-202ENST00000348987 CHCHD10Q8WYQ3 142 aaPredicted RBP12.6□□□□□ -0.39
SCARF1-202ENST00000348987 BPY2O14599 106 aa12.59□□□□□ -0.39
SCARF1-202ENST00000348987 C10orf25Q5T742 122 aa12.59□□□□□ -0.39
SCARF1-202ENST00000348987 TEP1Q99973 2627 aaKnown RBP12.58□□□□□ -0.39
SCARF1-202ENST00000348987 LINC00612Q8N6U2 182 aa12.58□□□□□ -0.4
SCARF1-202ENST00000348987 ATP5EP56381 51 aaPredicted RBP12.58□□□□□ -0.4
SCARF1-202ENST00000348987 IGLV6-57P01721 117 aa12.57□□□□□ -0.4
SCARF1-202ENST00000348987 UNQ6190/PRO20217Q6UXQ8 127 aa12.57□□□□□ -0.4
SCARF1-202ENST00000348987 Q8N9L7 120 aa12.57□□□□□ -0.4
SCARF1-202ENST00000348987 ANGP03950 147 aaKnown RBP12.54□□□□□ -0.4
SCARF1-202ENST00000348987 PRO0255Q9UI72 69 aa12.54□□□□□ -0.4
SCARF1-202ENST00000348987 DEFB135Q30KP9 77 aa12.54□□□□□ -0.4
SCARF1-202ENST00000348987 REG3AQ06141 175 aa12.53□□□□□ -0.4
SCARF1-202ENST00000348987 F8WDY8 70 aa12.5□□□□□ -0.41
SCARF1-202ENST00000348987 DIRC1Q969H9 104 aa12.5□□□□□ -0.41
SCARF1-202ENST00000348987 C1orf195Q5TG92 126 aa12.49□□□□□ -0.41
SCARF1-202ENST00000348987 CYSRT1A8MQ03 144 aa12.49□□□□□ -0.41
SCARF1-202ENST00000348987 H3BQ85 93 aa12.49□□□□□ -0.41
SCARF1-202ENST00000348987 SPAG11BQ08648 103 aa12.49□□□□□ -0.41
SCARF1-202ENST00000348987 PRYO14603 147 aa12.48□□□□□ -0.41
SCARF1-202ENST00000348987 ERC2-IT1O76042 136 aa12.48□□□□□ -0.41
SCARF1-202ENST00000348987 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.48□□□□□ -0.41
SCARF1-202ENST00000348987 XAGE1AQ9HD64 81 aa12.48□□□□□ -0.41
SCARF1-202ENST00000348987 F8P00451 2351 aa12.47□□□□□ -0.41
SCARF1-202ENST00000348987 PKD1L1Q8TDX9 2849 aa12.47□□□□□ -0.41
SCARF1-202ENST00000348987 ZNF73O43830 326 aaPredicted RBP12.46□□□□□ -0.41
SCARF1-202ENST00000348987 CELA1Q9UNI1 258 aa12.46□□□□□ -0.41
SCARF1-202ENST00000348987 IGKV4-1P06312 121 aa12.46□□□□□ -0.42
SCARF1-202ENST00000348987 OCR1Q9BZK8 76 aa12.46□□□□□ -0.42
SCARF1-202ENST00000348987 COX7BP24311 80 aa12.45□□□□□ -0.42
SCARF1-202ENST00000348987 FUSP35637 526 aaKnown RBP eCLIP12.45□□□□□ -0.42
SCARF1-202ENST00000348987 DAD1P61803 113 aa12.45□□□□□ -0.42
SCARF1-202ENST00000348987 ESRGQ1W209 222 aa12.45□□□□□ -0.42
SCARF1-202ENST00000348987 HIGD2AQ9BW72 106 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms