RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FSHBP01225 129 aa7.79□□□□□ -1.16
SMARCE1-202ENST00000348513 Q6ZRU5 148 aa7.79□□□□□ -1.16
SMARCE1-202ENST00000348513 EML5Q05BV3 1969 aa7.78□□□□□ -1.16
SMARCE1-202ENST00000348513 IGLV5-52A0A0A0MRZ9 124 aa7.77□□□□□ -1.16
SMARCE1-202ENST00000348513 DOPEY1Q5JWR5 2465 aa7.77□□□□□ -1.17
SMARCE1-202ENST00000348513 JMJD1CQ15652 2540 aa7.77□□□□□ -1.17
SMARCE1-202ENST00000348513 MYO9AB2RTY4 2548 aa7.77□□□□□ -1.17
SMARCE1-202ENST00000348513 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
SMARCE1-202ENST00000348513 COA5Q86WW8 74 aa7.76□□□□□ -1.17
SMARCE1-202ENST00000348513 CIRBP-AS1Q8TBR5 109 aa7.76□□□□□ -1.17
SMARCE1-202ENST00000348513 FP248Q71RG6 208 aaPredicted RBP7.74□□□□□ -1.17
SMARCE1-202ENST00000348513 REG3GQ6UW15 175 aa7.74□□□□□ -1.17
SMARCE1-202ENST00000348513 EGFEM1PQ0D2K5 195 aa7.73□□□□□ -1.17
SMARCE1-202ENST00000348513 DEFB116Q30KQ4 102 aa7.73□□□□□ -1.17
SMARCE1-202ENST00000348513 ACYP2P14621 99 aa7.73□□□□□ -1.17
SMARCE1-202ENST00000348513 LINC01556Q5JQF7 62 aa7.73□□□□□ -1.17
SMARCE1-202ENST00000348513 LYPD5Q6UWN5 251 aa7.72□□□□□ -1.17
SMARCE1-202ENST00000348513 KIF25-AS1Q9Y6Z4 181 aa7.72□□□□□ -1.17
SMARCE1-202ENST00000348513 TET2Q6N021 2002 aaPredicted RBP7.71□□□□□ -1.17
SMARCE1-202ENST00000348513 ABCA12Q86UK0 2595 aa7.7□□□□□ -1.18
SMARCE1-202ENST00000348513 LINC01600Q96MT4 127 aa7.7□□□□□ -1.18
SMARCE1-202ENST00000348513 C1orf134Q5TEV5 83 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 AGRNO00468 2067 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 ZFYVE26Q68DK2 2539 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 A0A1B0GW54 56 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 C11orf72Q8NBR9 251 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 TLN2Q9Y4G6 2542 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 IGLV5-39A0A0G2JS06 123 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 A8MTW9 85 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 OXTP01178 125 aa7.69□□□□□ -1.18
SMARCE1-202ENST00000348513 LITAFQ99732 161 aa7.68□□□□□ -1.18
SMARCE1-202ENST00000348513 CEP295Q9C0D2 2601 aa7.67□□□□□ -1.18
SMARCE1-202ENST00000348513 IGHV6-1A0A0B4J1U7 121 aa7.67□□□□□ -1.18
SMARCE1-202ENST00000348513 LRRK2Q5S007 2527 aa7.67□□□□□ -1.18
SMARCE1-202ENST00000348513 ANKRD11Q6UB99 2663 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-202ENST00000348513 SSBP3-AS1Q7Z2R9 100 aa7.66□□□□□ -1.18
SMARCE1-202ENST00000348513 TP53AIP1Q9HCN2 124 aa7.66□□□□□ -1.18
SMARCE1-202ENST00000348513 LINC00588Q9Y4M8 146 aa7.66□□□□□ -1.18
SMARCE1-202ENST00000348513 FAM229BQ4G0N7 80 aa7.66□□□□□ -1.18
SMARCE1-202ENST00000348513 MIR22HGQ0VDD5 57 aa7.65□□□□□ -1.18
SMARCE1-202ENST00000348513 Q9BRP9 147 aa7.65□□□□□ -1.18
SMARCE1-202ENST00000348513 C6orf48Q9UBA6 75 aa7.65□□□□□ -1.18
SMARCE1-202ENST00000348513 FN1P02751 2386 aaKnown RBP7.65□□□□□ -1.19
SMARCE1-202ENST00000348513 UQCR11O14957 56 aa7.65□□□□□ -1.19
SMARCE1-202ENST00000348513 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.19
SMARCE1-202ENST00000348513 PRLHP81277 87 aa7.64□□□□□ -1.19
SMARCE1-202ENST00000348513 Q75L30 129 aa7.64□□□□□ -1.19
SMARCE1-202ENST00000348513 A0A1B0GUV1 79 aa7.63□□□□□ -1.19
SMARCE1-202ENST00000348513 USP9XQ93008 2570 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-202ENST00000348513 SETD2Q9BYW2 2564 aaPredicted RBP7.62□□□□□ -1.19
SMARCE1-202ENST00000348513 A0A087WSZ3 146 aa7.6□□□□□ -1.19
SMARCE1-202ENST00000348513 LINC00313P59037 77 aa7.6□□□□□ -1.19
SMARCE1-202ENST00000348513 IGLV5-45A0A087WSX0 123 aa7.6□□□□□ -1.19
SMARCE1-202ENST00000348513 TRBV7-4A0A0J9YYF1 115 aa7.6□□□□□ -1.19
SMARCE1-202ENST00000348513 X6R8D5 127 aa7.6□□□□□ -1.19
SMARCE1-202ENST00000348513 CHD8Q9HCK8 2581 aa7.59□□□□□ -1.19
SMARCE1-202ENST00000348513 COL4A2P08572 1712 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 SPTBN4Q9H254 2564 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 SPINK1P00995 79 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 KRTAP24-1Q3LI83 254 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 C22orf24Q9Y442 160 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 PRAC1Q96KF2 57 aa7.58□□□□□ -1.2
SMARCE1-202ENST00000348513 SPANXA2-OT1Q8N9U9 137 aa7.57□□□□□ -1.2
SMARCE1-202ENST00000348513 Q6ZRP5 223 aa7.57□□□□□ -1.2
SMARCE1-202ENST00000348513 ZNF462Q96JM2 2506 aa7.57□□□□□ -1.2
SMARCE1-202ENST00000348513 PTPRBP23467 1997 aa7.56□□□□□ -1.2
SMARCE1-202ENST00000348513 KIAA0087Q14695 138 aa7.55□□□□□ -1.2
SMARCE1-202ENST00000348513 COL27A1Q8IZC6 1860 aaPredicted RBP7.54□□□□□ -1.2
SMARCE1-202ENST00000348513 C16orf90A8MZG2 172 aa7.54□□□□□ -1.2
SMARCE1-202ENST00000348513 USP9YO00507 2555 aaPredicted RBP7.53□□□□□ -1.2
SMARCE1-202ENST00000348513 J3QL48 77 aa7.52□□□□□ -1.21
SMARCE1-202ENST00000348513 PHF5AQ7RTV0 110 aaKnown RBP7.52□□□□□ -1.21
SMARCE1-202ENST00000348513 Q5VV11 94 aa7.52□□□□□ -1.21
SMARCE1-202ENST00000348513 LINC00315P59091 139 aa7.51□□□□□ -1.21
SMARCE1-202ENST00000348513 IGLV8-61A0A075B6I0 122 aa7.51□□□□□ -1.21
SMARCE1-202ENST00000348513 EIF4EBP3O60516 100 aaPredicted RBP7.51□□□□□ -1.21
SMARCE1-202ENST00000348513 OBSCN-AS1Q96MR7 158 aa7.51□□□□□ -1.21
SMARCE1-202ENST00000348513 MOBPQ13875 183 aa7.5□□□□□ -1.21
SMARCE1-202ENST00000348513 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
SMARCE1-202ENST00000348513 LINC00167Q96N53 147 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 K7EQZ3 153 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 Q8NBF4 154 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 MUC4Q99102 2169 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 UTRNP46939 3433 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 SPACA4Q8TDM5 124 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 POLQO75417 2590 aa7.49□□□□□ -1.21
SMARCE1-202ENST00000348513 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
SMARCE1-202ENST00000348513 A0A0A0MQY5 61 aa7.47□□□□□ -1.21
SMARCE1-202ENST00000348513 PRR26Q8N8Z3 221 aa7.47□□□□□ -1.21
SMARCE1-202ENST00000348513 MTORP42345 2549 aa7.46□□□□□ -1.21
SMARCE1-202ENST00000348513 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.21
SMARCE1-202ENST00000348513 C9orf129Q5T035 196 aaKnown RBP7.46□□□□□ -1.21
SMARCE1-202ENST00000348513 IGKV2D-30A0A075B6S6 120 aa7.45□□□□□ -1.22
SMARCE1-202ENST00000348513 IGKV2-30P06310 120 aa7.45□□□□□ -1.22
SMARCE1-202ENST00000348513 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
SMARCE1-202ENST00000348513 DNAH12Q6ZR08 3092 aa7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 EPM2AB3EWF7 344 aa7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 ANKRD17O75179 2603 aaKnown RBP7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 RTL8CO15255 209 aa7.44□□□□□ -1.22
SMARCE1-202ENST00000348513 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms