RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PPDPFQ9H3Y8 114 aa17.3■□□□□ 0.36
SSBP4-202ENST00000348495 MUSTN1Q8IVN3 82 aa17.3■□□□□ 0.36
SSBP4-202ENST00000348495 HSD52Q0P140 79 aa17.29■□□□□ 0.36
SSBP4-202ENST00000348495 CTAG1AP78358 180 aa17.27■□□□□ 0.36
SSBP4-202ENST00000348495 DNAH5Q8TE73 4624 aa17.27■□□□□ 0.35
SSBP4-202ENST00000348495 IGKV2-24A0A0C4DH68 120 aa17.26■□□□□ 0.35
SSBP4-202ENST00000348495 CHTF8P0CG12 524 aa17.26■□□□□ 0.35
SSBP4-202ENST00000348495 COPS9Q8WXC6 57 aa17.26■□□□□ 0.35
SSBP4-202ENST00000348495 CEND1Q8N111 149 aa17.25■□□□□ 0.35
SSBP4-202ENST00000348495 PANO1I0J062 215 aa17.24■□□□□ 0.35
SSBP4-202ENST00000348495 Q8NDZ9 215 aa17.24■□□□□ 0.35
SSBP4-202ENST00000348495 LINC00474Q9P2X8 69 aa17.23■□□□□ 0.35
SSBP4-202ENST00000348495 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP17.23■□□□□ 0.35
SSBP4-202ENST00000348495 KRTAP10-1P60331 282 aa17.21■□□□□ 0.35
SSBP4-202ENST00000348495 SPACA4Q8TDM5 124 aa17.21■□□□□ 0.35
SSBP4-202ENST00000348495 PLA2G2DQ9UNK4 145 aa17.21■□□□□ 0.35
SSBP4-202ENST00000348495 PCP4L1A6NKN8 68 aa17.2■□□□□ 0.34
SSBP4-202ENST00000348495 RPL24P83731 157 aaKnown RBP17.2■□□□□ 0.34
SSBP4-202ENST00000348495 FAM168BA1KXE4 195 aa17.18■□□□□ 0.34
SSBP4-202ENST00000348495 FXYD2P54710 66 aa17.18■□□□□ 0.34
SSBP4-202ENST00000348495 KRTAP7-1Q8IUC3 87 aa17.18■□□□□ 0.34
SSBP4-202ENST00000348495 A4D1N5 150 aa17.18■□□□□ 0.34
SSBP4-202ENST00000348495 NDUFC2O95298 119 aa17.18■□□□□ 0.34
SSBP4-202ENST00000348495 VPREB1P12018 145 aa17.17■□□□□ 0.34
SSBP4-202ENST00000348495 SERTAD4-AS1Q5TG53 156 aa17.17■□□□□ 0.34
SSBP4-202ENST00000348495 BVES-AS1Q5T3Y7 98 aa17.16■□□□□ 0.34
SSBP4-202ENST00000348495 A0A1W2PNN7 141 aa17.16■□□□□ 0.34
SSBP4-202ENST00000348495 Q6ZSA8 131 aa17.16■□□□□ 0.34
SSBP4-202ENST00000348495 PKHD1P08F94 4074 aa17.15■□□□□ 0.34
SSBP4-202ENST00000348495 HINT1P49773 126 aaPredicted RBP17.14■□□□□ 0.33
SSBP4-202ENST00000348495 PRR3P79522 188 aaKnown RBP17.14■□□□□ 0.33
SSBP4-202ENST00000348495 FAM30AQ9NZY2 134 aa17.14■□□□□ 0.33
SSBP4-202ENST00000348495 IGLV5-37A0A075B6J1 123 aa17.13■□□□□ 0.33
SSBP4-202ENST00000348495 IGKV2-28A0A075B6P5 120 aa17.13■□□□□ 0.33
SSBP4-202ENST00000348495 M0R143 59 aa17.13■□□□□ 0.33
SSBP4-202ENST00000348495 IGKV2D-28P01615 120 aa17.13■□□□□ 0.33
SSBP4-202ENST00000348495 EPM2AB3EWF7 344 aa17.12■□□□□ 0.33
SSBP4-202ENST00000348495 FAM19A5Q7Z5A7 132 aaPredicted RBP17.1■□□□□ 0.33
SSBP4-202ENST00000348495 TMEM238LA0A1B0GVL6 79 aa17.1■□□□□ 0.33
SSBP4-202ENST00000348495 A6NJY4 79 aa17.1■□□□□ 0.33
SSBP4-202ENST00000348495 A0A087WYN8 130 aa17.09■□□□□ 0.33
SSBP4-202ENST00000348495 DPH3Q96FX2 82 aa17.08■□□□□ 0.32
SSBP4-202ENST00000348495 DNAH8Q96JB1 4490 aa17.08■□□□□ 0.32
SSBP4-202ENST00000348495 TRBV10-2A0A0K0K1G8 114 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 CFC1BP0CG36 223 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 CFC1P0CG37 223 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 PLAC8Q9NZF1 115 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 NCR3O14931 201 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 C22orf24Q9Y442 160 aa17.07■□□□□ 0.32
SSBP4-202ENST00000348495 LINC00337Q8N6G1 96 aa17.06■□□□□ 0.32
SSBP4-202ENST00000348495 NKAPP1Q8N9T2 125 aa17.05■□□□□ 0.32
SSBP4-202ENST00000348495 A0A1B0GWB2 263 aa17.04■□□□□ 0.32
SSBP4-202ENST00000348495 A0A0B4J2C4 111 aa17.04■□□□□ 0.32
SSBP4-202ENST00000348495 M0R378 163 aa17.04■□□□□ 0.32
SSBP4-202ENST00000348495 NHP2Q9NX24 153 aaKnown RBP17.04■□□□□ 0.32
SSBP4-202ENST00000348495 LRP1BQ9NZR2 4599 aa17.03■□□□□ 0.32
SSBP4-202ENST00000348495 DYNC1H1Q14204 4646 aaKnown RBP17.03■□□□□ 0.32
SSBP4-202ENST00000348495 M0QXV9 152 aa17.03■□□□□ 0.32
SSBP4-202ENST00000348495 C7orf33Q8WU49 177 aa17.02■□□□□ 0.32
SSBP4-202ENST00000348495 MRPL55Q7Z7F7 128 aaKnown RBP17.01■□□□□ 0.31
SSBP4-202ENST00000348495 CIRBP-AS1Q8TBR5 109 aa17.01■□□□□ 0.31
SSBP4-202ENST00000348495 SNHG12Q9BXW3 62 aa17.01■□□□□ 0.31
SSBP4-202ENST00000348495 BATFQ16520 125 aa17■□□□□ 0.31
SSBP4-202ENST00000348495 SCXQ7RTU7 201 aa17■□□□□ 0.31
SSBP4-202ENST00000348495 EPPK1P58107 5090 aaKnown RBP16.99■□□□□ 0.31
SSBP4-202ENST00000348495 TRAV13-2A0A0B4J235 113 aa16.99■□□□□ 0.31
SSBP4-202ENST00000348495 K7ERJ3 54 aa16.99■□□□□ 0.31
SSBP4-202ENST00000348495 IGLV6-57P01721 117 aa16.99■□□□□ 0.31
SSBP4-202ENST00000348495 LINC00167Q96N53 147 aa16.99■□□□□ 0.31
SSBP4-202ENST00000348495 GAGE10A6NGK3 116 aa16.97■□□□□ 0.31
SSBP4-202ENST00000348495 PHF5AQ7RTV0 110 aaKnown RBP16.97■□□□□ 0.31
SSBP4-202ENST00000348495 RAB37Q96AX2 223 aa16.97■□□□□ 0.31
SSBP4-202ENST00000348495 A6NDN8 102 aa16.96■□□□□ 0.31
SSBP4-202ENST00000348495 TRBV10-3A0A0K0K1G6 114 aa16.96■□□□□ 0.3
SSBP4-202ENST00000348495 LBHQ53QV2 105 aaPredicted RBP16.96■□□□□ 0.3
SSBP4-202ENST00000348495 S100A7L2Q5SY68 101 aa16.95■□□□□ 0.3
SSBP4-202ENST00000348495 OR13C6PQ8NH95 151 aa16.95■□□□□ 0.3
SSBP4-202ENST00000348495 TMEM126AQ9H061 195 aa16.95■□□□□ 0.3
SSBP4-202ENST00000348495 PRO1854Q9UHT4 67 aa16.95■□□□□ 0.3
SSBP4-202ENST00000348495 IGLV1-50A0A075B6I6 118 aa16.93■□□□□ 0.3
SSBP4-202ENST00000348495 HAMPP81172 84 aa16.93■□□□□ 0.3
SSBP4-202ENST00000348495 RPL13AP40429 203 aaKnown RBP16.92■□□□□ 0.3
SSBP4-202ENST00000348495 RPL37AP8A6NKH3 93 aa16.9■□□□□ 0.3
SSBP4-202ENST00000348495 XGP55808 180 aa16.9■□□□□ 0.3
SSBP4-202ENST00000348495 KRTAP11-1Q8IUC1 163 aa16.89■□□□□ 0.29
SSBP4-202ENST00000348495 KCNQ1DNQ9H478 68 aa16.87■□□□□ 0.29
SSBP4-202ENST00000348495 H7C2G1 150 aa16.84■□□□□ 0.29
SSBP4-202ENST00000348495 UBE2BP63146 152 aa16.84■□□□□ 0.29
SSBP4-202ENST00000348495 SMIM11BQ8TCY0 68 aa16.84■□□□□ 0.29
SSBP4-202ENST00000348495 TRAV23DV6A0A075B6W5 121 aa16.84■□□□□ 0.29
SSBP4-202ENST00000348495 APOBP04114 4563 aaKnown RBP16.83■□□□□ 0.28
SSBP4-202ENST00000348495 TSPAN13O95857 204 aa16.82■□□□□ 0.28
SSBP4-202ENST00000348495 PRYO14603 147 aa16.82■□□□□ 0.28
SSBP4-202ENST00000348495 CBY1Q9Y3M2 126 aa16.82■□□□□ 0.28
SSBP4-202ENST00000348495 COL5A1-AS1Q5SY13 56 aa16.81■□□□□ 0.28
SSBP4-202ENST00000348495 RPL28P46779 137 aaKnown RBP16.8■□□□□ 0.28
SSBP4-202ENST00000348495 TAX1BP3O14907 124 aa16.79■□□□□ 0.28
SSBP4-202ENST00000348495 SPRR1AP35321 89 aa16.79■□□□□ 0.28
SSBP4-202ENST00000348495 ZNF73O43830 326 aaPredicted RBP16.79■□□□□ 0.28
SSBP4-202ENST00000348495 Q1RN00 199 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms