RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR13C6PQ8NH95 151 aa4.07□□□□□ -1.76
CLCN3-201ENST00000347613 PLECQ15149 4684 aaKnown RBP4.07□□□□□ -1.76
CLCN3-201ENST00000347613 Q8IZM0 81 aa4.07□□□□□ -1.76
CLCN3-201ENST00000347613 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
CLCN3-201ENST00000347613 TRAV13-2A0A0B4J235 113 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 H3BS24 57 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 OBSCN-AS1Q96MR7 158 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 LOC107984640A0A0U1RRK4 108 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
CLCN3-201ENST00000347613 CYSTM1Q9H1C7 97 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 LINC00846Q9NV44 126 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 KLK12Q9UKR0 248 aa4.06□□□□□ -1.76
CLCN3-201ENST00000347613 FAM240AA0A1B0GVK7 77 aa4.05□□□□□ -1.76
CLCN3-201ENST00000347613 CD164L2Q6UWJ8 174 aa4.05□□□□□ -1.76
CLCN3-201ENST00000347613 WFDC10BQ8IUB3 73 aa4.05□□□□□ -1.76
CLCN3-201ENST00000347613 DAD1P61803 113 aa4.05□□□□□ -1.76
CLCN3-201ENST00000347613 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
CLCN3-201ENST00000347613 TRBV7-7A0A0K0K1E9 115 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 C9orf66Q5T8R8 295 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 LINC01561Q8N1V8 128 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 PRR26Q8N8Z3 221 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 A0A087WVE0 104 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 LYRM9A8MSI8 78 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 Q5XG85 94 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 LYPD5Q6UWN5 251 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 CXCL5P42830 114 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 KRTAP26-1Q6PEX3 210 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 Q6Q795 121 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 WFDC9Q8NEX5 89 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 XAGE1AQ9HD64 81 aa4.04□□□□□ -1.76
CLCN3-201ENST00000347613 FAM236AA0A1B0GUQ0 79 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 FAM236BA0A1B0GV22 79 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 C6orf99Q4VX62 202 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 PRR34Q9NV39 138 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 C6orf48Q9UBA6 75 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 IGKV3D-7A0A0C4DH55 119 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 Q6ZTC4 211 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 Q8N814 137 aa4.03□□□□□ -1.76
CLCN3-201ENST00000347613 PRB2P02812 416 aaPredicted RBP4.02□□□□□ -1.77
CLCN3-201ENST00000347613 HIGD2BQ4VC39 106 aa4.02□□□□□ -1.77
CLCN3-201ENST00000347613 C2orf48Q96LS8 159 aa4.02□□□□□ -1.77
CLCN3-201ENST00000347613 FRAS1Q86XX4 4008 aa4.02□□□□□ -1.77
CLCN3-201ENST00000347613 LINC00167Q96N53 147 aa4.02□□□□□ -1.77
CLCN3-201ENST00000347613 DYNC2H1Q8NCM8 4307 aaKnown RBP4.01□□□□□ -1.77
CLCN3-201ENST00000347613 RPL18AQ02543 176 aaKnown RBP4.01□□□□□ -1.77
CLCN3-201ENST00000347613 PRO0628Q9UI54 55 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 STARD9Q9P2P6 4700 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 SPAG11BQ08648 103 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 ESRGQ1W209 222 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 KMT2AQ03164 3969 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 LELP1Q5T871 98 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 COPS9Q8WXC6 57 aa4.01□□□□□ -1.77
CLCN3-201ENST00000347613 SPART-AS1P0CW21 52 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 MIFP14174 115 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 H0YGX0 51 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 APOC4P55056 127 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 CASC10Q5T4H9 136 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 C15orf56Q8N910 161 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 STAB2Q8WWQ8 2551 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 DNAH2Q9P225 4427 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 TRBV10-3A0A0K0K1G6 114 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 DNAL4O96015 105 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 KPRPQ5T749 579 aaPredicted RBP4□□□□□ -1.77
CLCN3-201ENST00000347613 LINC00643Q86TS7 51 aa4□□□□□ -1.77
CLCN3-201ENST00000347613 PRKDCP78527 4128 aaKnown RBP4□□□□□ -1.77
CLCN3-201ENST00000347613 A0A0J9YWU9 116 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 KRTAP24-1Q3LI83 254 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 HECTD4Q9Y4D8 3996 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 NDUFC2O95298 119 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 LINC00575Q6W349 94 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 Q6ZRU5 148 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 HIST1H4AP62805 103 aaKnown RBP3.99□□□□□ -1.77
CLCN3-201ENST00000347613 COX17Q14061 63 aa3.99□□□□□ -1.77
CLCN3-201ENST00000347613 ORMDL1Q9P0S3 153 aa3.98□□□□□ -1.77
CLCN3-201ENST00000347613 MGAM2Q2M2H8 2515 aa3.98□□□□□ -1.77
CLCN3-201ENST00000347613 ACYP1P07311 99 aa3.98□□□□□ -1.77
CLCN3-201ENST00000347613 TMEM126AQ9H061 195 aa3.98□□□□□ -1.77
CLCN3-201ENST00000347613 Q6ZRP5 223 aa3.97□□□□□ -1.77
CLCN3-201ENST00000347613 FBN3Q75N90 2809 aa3.97□□□□□ -1.77
CLCN3-201ENST00000347613 CCKP06307 115 aa3.97□□□□□ -1.77
CLCN3-201ENST00000347613 KRTAP7-1Q8IUC3 87 aa3.97□□□□□ -1.77
CLCN3-201ENST00000347613 PKIGQ9Y2B9 76 aa3.97□□□□□ -1.77
CLCN3-201ENST00000347613 INAFM2P0DMQ5 153 aa3.96□□□□□ -1.77
CLCN3-201ENST00000347613 FAM168BA1KXE4 195 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 VPREB1P12018 145 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 S100A7L2Q5SY68 101 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 Q6ZQY7 126 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 SERTAD4-AS1Q5TG53 156 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 VPS13DQ5THJ4 4388 aa3.96□□□□□ -1.78
CLCN3-201ENST00000347613 DNHD1Q96M86 4753 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 Q6ZQT0 140 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 FAM236DA0A1B0GTK5 79 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 FAM236CP0DP71 79 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 IMUPQ9GZP8 106 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 hADV29S1A0JD25 119 aa3.95□□□□□ -1.78
CLCN3-201ENST00000347613 HRCT1Q6UXD1 115 aa3.94□□□□□ -1.78
CLCN3-201ENST00000347613 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.94□□□□□ -1.78
CLCN3-201ENST00000347613 GVQW2A0A096LPI5 108 aaPredicted RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms