RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 FBN2P35556 2912 aa12.24□□□□□ -0.45
KRCC1-201ENST00000347055 DAD1P61803 113 aa12.23□□□□□ -0.45
KRCC1-201ENST00000347055 SPTBN4Q9H254 2564 aa12.22□□□□□ -0.45
KRCC1-201ENST00000347055 C2CD3Q4AC94 2353 aa12.22□□□□□ -0.45
KRCC1-201ENST00000347055 APOC4P55056 127 aa12.21□□□□□ -0.45
KRCC1-201ENST00000347055 FLNCQ14315 2725 aa12.21□□□□□ -0.45
KRCC1-201ENST00000347055 MAP1AP78559 2803 aaPredicted RBP12.21□□□□□ -0.46
KRCC1-201ENST00000347055 C6orf48Q9UBA6 75 aa12.2□□□□□ -0.46
KRCC1-201ENST00000347055 UTP20O75691 2785 aaKnown RBP12.2□□□□□ -0.46
KRCC1-201ENST00000347055 WFDC11Q8NEX6 87 aa12.2□□□□□ -0.46
KRCC1-201ENST00000347055 F8WEM9 126 aa12.19□□□□□ -0.46
KRCC1-201ENST00000347055 MIFP14174 115 aa12.19□□□□□ -0.46
KRCC1-201ENST00000347055 CELA1Q9UNI1 258 aa12.19□□□□□ -0.46
KRCC1-201ENST00000347055 SETXQ7Z333 2677 aaKnown RBP12.19□□□□□ -0.46
KRCC1-201ENST00000347055 M0R378 163 aa12.18□□□□□ -0.46
KRCC1-201ENST00000347055 KRTAP1-1Q07627 177 aa12.18□□□□□ -0.46
KRCC1-201ENST00000347055 NREPQ16612 68 aa12.18□□□□□ -0.46
KRCC1-201ENST00000347055 RMI2Q96E14 147 aa12.18□□□□□ -0.46
KRCC1-201ENST00000347055 A0A1B0GW54 56 aa12.17□□□□□ -0.46
KRCC1-201ENST00000347055 EGFEM1PQ0D2K5 195 aa12.17□□□□□ -0.46
KRCC1-201ENST00000347055 TEX15Q9BXT5 2789 aa12.16□□□□□ -0.46
KRCC1-201ENST00000347055 F8WDY8 70 aa12.16□□□□□ -0.46
KRCC1-201ENST00000347055 VPREB1P12018 145 aa12.16□□□□□ -0.46
KRCC1-201ENST00000347055 WNK1Q9H4A3 2382 aa12.15□□□□□ -0.46
KRCC1-201ENST00000347055 PRO0628Q9UI54 55 aa12.15□□□□□ -0.46
KRCC1-201ENST00000347055 SNURFQ9Y675 71 aa12.15□□□□□ -0.46
KRCC1-201ENST00000347055 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
KRCC1-201ENST00000347055 BPY2O14599 106 aa12.14□□□□□ -0.47
KRCC1-201ENST00000347055 SPART-AS1P0CW21 52 aa12.14□□□□□ -0.47
KRCC1-201ENST00000347055 TM2D3Q9BRN9 247 aa12.14□□□□□ -0.47
KRCC1-201ENST00000347055 KLK12Q9UKR0 248 aa12.14□□□□□ -0.47
KRCC1-201ENST00000347055 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
KRCC1-201ENST00000347055 Q8NAQ8 132 aa12.13□□□□□ -0.47
KRCC1-201ENST00000347055 TLN2Q9Y4G6 2542 aa12.12□□□□□ -0.47
KRCC1-201ENST00000347055 IGSF10Q6WRI0 2623 aa12.12□□□□□ -0.47
KRCC1-201ENST00000347055 NAV2Q8IVL1 2488 aa12.12□□□□□ -0.47
KRCC1-201ENST00000347055 DEFB135Q30KP9 77 aa12.1□□□□□ -0.47
KRCC1-201ENST00000347055 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
KRCC1-201ENST00000347055 PRB1P04280 392 aa12.09□□□□□ -0.47
KRCC1-201ENST00000347055 IGKV4-1P06312 121 aa12.09□□□□□ -0.47
KRCC1-201ENST00000347055 CAMK2N2Q96S95 79 aa12.09□□□□□ -0.47
KRCC1-201ENST00000347055 POLQO75417 2590 aa12.08□□□□□ -0.48
KRCC1-201ENST00000347055 FP248Q71RG6 208 aaPredicted RBP12.08□□□□□ -0.48
KRCC1-201ENST00000347055 ACACBO00763 2458 aa12.08□□□□□ -0.48
KRCC1-201ENST00000347055 UBR5O95071 2799 aaPredicted RBP12.08□□□□□ -0.48
KRCC1-201ENST00000347055 H3BNG1 76 aa12.07□□□□□ -0.48
KRCC1-201ENST00000347055 OCR1Q9BZK8 76 aa12.07□□□□□ -0.48
KRCC1-201ENST00000347055 CSMD2Q7Z408 3487 aa12.07□□□□□ -0.48
KRCC1-201ENST00000347055 A0A0U1RQV1 116 aa12.06□□□□□ -0.48
KRCC1-201ENST00000347055 NBPF19A0A087WUL8 3843 aa12.06□□□□□ -0.48
KRCC1-201ENST00000347055 EPG5Q9HCE0 2579 aa12.06□□□□□ -0.48
KRCC1-201ENST00000347055 KRTAP10-3P60369 221 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 SCXQ7RTU7 201 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 MYO18BQ8IUG5 2567 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 CACNA1AO00555 2505 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 PRYO14603 147 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 JMJD1CQ15652 2540 aa12.05□□□□□ -0.48
KRCC1-201ENST00000347055 DEFB4AO15263 64 aa12.03□□□□□ -0.48
KRCC1-201ENST00000347055 PTPN13Q12923 2485 aa12.03□□□□□ -0.48
KRCC1-201ENST00000347055 IGLV5-48A0A075B6I7 105 aa12.02□□□□□ -0.48
KRCC1-201ENST00000347055 KRTAP26-1Q6PEX3 210 aa12.02□□□□□ -0.48
KRCC1-201ENST00000347055 LINC00336Q6ZUF6 198 aa12.02□□□□□ -0.49
KRCC1-201ENST00000347055 KCNQ1DNQ9H478 68 aa12.01□□□□□ -0.49
KRCC1-201ENST00000347055 LRRK2Q5S007 2527 aa12.01□□□□□ -0.49
KRCC1-201ENST00000347055 Q6ZRU5 148 aa12□□□□□ -0.49
KRCC1-201ENST00000347055 ITPR3Q14573 2671 aa11.99□□□□□ -0.49
KRCC1-201ENST00000347055 PIEZO1Q92508 2521 aa11.98□□□□□ -0.49
KRCC1-201ENST00000347055 HTN3P15516 51 aa11.98□□□□□ -0.49
KRCC1-201ENST00000347055 C15orf56Q8N910 161 aa11.98□□□□□ -0.49
KRCC1-201ENST00000347055 LCE6AA0A183 80 aa11.97□□□□□ -0.49
KRCC1-201ENST00000347055 DHRS4-AS1Q9P1J3 65 aa11.97□□□□□ -0.49
KRCC1-201ENST00000347055 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.49
KRCC1-201ENST00000347055 FAM208BQ5VWN6 2430 aa11.96□□□□□ -0.49
KRCC1-201ENST00000347055 PLA2G2DQ9UNK4 145 aa11.96□□□□□ -0.49
KRCC1-201ENST00000347055 KPRPQ5T749 579 aaPredicted RBP11.94□□□□□ -0.5
KRCC1-201ENST00000347055 ESRGQ1W209 222 aa11.93□□□□□ -0.5
KRCC1-201ENST00000347055 Q8N377 158 aa11.92□□□□□ -0.5
KRCC1-201ENST00000347055 NKAPP1Q8N9T2 125 aa11.92□□□□□ -0.5
KRCC1-201ENST00000347055 Q6ZTC4 211 aa11.92□□□□□ -0.5
KRCC1-201ENST00000347055 TLX1NBP0CAT3 122 aa11.91□□□□□ -0.5
KRCC1-201ENST00000347055 Q6ZRP5 223 aa11.91□□□□□ -0.5
KRCC1-201ENST00000347055 WFDC10BQ8IUB3 73 aa11.91□□□□□ -0.5
KRCC1-201ENST00000347055 Q8N9L7 120 aa11.91□□□□□ -0.5
KRCC1-201ENST00000347055 CENPEQ02224 2701 aa11.9□□□□□ -0.5
KRCC1-201ENST00000347055 ZNF462Q96JM2 2506 aa11.9□□□□□ -0.5
KRCC1-201ENST00000347055 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
KRCC1-201ENST00000347055 LINC00474Q9P2X8 69 aa11.9□□□□□ -0.5
KRCC1-201ENST00000347055 ABCA12Q86UK0 2595 aa11.9□□□□□ -0.5
KRCC1-201ENST00000347055 IGLV5-37A0A075B6J1 123 aa11.9□□□□□ -0.51
KRCC1-201ENST00000347055 SYCNQ0VAF6 134 aa11.9□□□□□ -0.51
KRCC1-201ENST00000347055 APCP25054 2843 aa11.89□□□□□ -0.51
KRCC1-201ENST00000347055 TNP2Q05952 138 aa11.89□□□□□ -0.51
KRCC1-201ENST00000347055 ANK3Q12955 4377 aaKnown RBP11.88□□□□□ -0.51
KRCC1-201ENST00000347055 C3orf84H3BNL1 204 aa11.87□□□□□ -0.51
KRCC1-201ENST00000347055 LINC01556Q5JQF7 62 aa11.87□□□□□ -0.51
KRCC1-201ENST00000347055 Q6ZRX8 168 aa11.87□□□□□ -0.51
KRCC1-201ENST00000347055 SPRR4Q96PI1 79 aa11.87□□□□□ -0.51
KRCC1-201ENST00000347055 NIPBLQ6KC79 2804 aaeCLIP11.87□□□□□ -0.51
KRCC1-201ENST00000347055 Q8NBF4 154 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms