RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 LYPD5Q6UWN5 251 aa12.18□□□□□ -0.46
VHL-202ENST00000345392 C4orf26Q17RF5 130 aa12.17□□□□□ -0.46
VHL-202ENST00000345392 NDUFC2O95298 119 aa12.17□□□□□ -0.46
VHL-202ENST00000345392 KRTAP1-1Q07627 177 aa12.16□□□□□ -0.46
VHL-202ENST00000345392 MAST4O15021 2626 aa12.16□□□□□ -0.46
VHL-202ENST00000345392 CHCHD10Q8WYQ3 142 aaPredicted RBP12.15□□□□□ -0.46
VHL-202ENST00000345392 LAMTOR3Q9UHA4 124 aa12.15□□□□□ -0.46
VHL-202ENST00000345392 RBM3P98179 157 aaKnown RBP12.14□□□□□ -0.47
VHL-202ENST00000345392 LINC00575Q6W349 94 aa12.14□□□□□ -0.47
VHL-202ENST00000345392 SPATA3Q8NHX4 192 aa12.14□□□□□ -0.47
VHL-202ENST00000345392 CD164L2Q6UWJ8 174 aa12.14□□□□□ -0.47
VHL-202ENST00000345392 Q6ZQT0 140 aa12.14□□□□□ -0.47
VHL-202ENST00000345392 ANGP03950 147 aaKnown RBP12.13□□□□□ -0.47
VHL-202ENST00000345392 COX17Q14061 63 aa12.13□□□□□ -0.47
VHL-202ENST00000345392 C6orf223Q8N319 242 aa12.13□□□□□ -0.47
VHL-202ENST00000345392 DEFB4AO15263 64 aa12.12□□□□□ -0.47
VHL-202ENST00000345392 HAMPP81172 84 aa12.12□□□□□ -0.47
VHL-202ENST00000345392 C10orf25Q5T742 122 aa12.12□□□□□ -0.47
VHL-202ENST00000345392 Q5XG85 94 aa12.11□□□□□ -0.47
VHL-202ENST00000345392 PRO0255Q9UI72 69 aa12.11□□□□□ -0.47
VHL-202ENST00000345392 HRCT1Q6UXD1 115 aa12.11□□□□□ -0.47
VHL-202ENST00000345392 TRBV10-3A0A0K0K1G6 114 aa12.1□□□□□ -0.47
VHL-202ENST00000345392 REG3AQ06141 175 aa12.1□□□□□ -0.47
VHL-202ENST00000345392 UNQ6190/PRO20217Q6UXQ8 127 aa12.1□□□□□ -0.47
VHL-202ENST00000345392 IGHV4-28A0A0C4DH34 117 aa12.09□□□□□ -0.47
VHL-202ENST00000345392 LINC01547P58512 204 aaPredicted RBP12.09□□□□□ -0.47
VHL-202ENST00000345392 TENM1Q9UKZ4 2725 aa12.09□□□□□ -0.47
VHL-202ENST00000345392 KRTAP10-3P60369 221 aa12.08□□□□□ -0.48
VHL-202ENST00000345392 LINC00482Q8N8I6 264 aa12.08□□□□□ -0.48
VHL-202ENST00000345392 ZNF561-AS1K7EIQ3 104 aa12.08□□□□□ -0.48
VHL-202ENST00000345392 LINC00612Q8N6U2 182 aa12.08□□□□□ -0.48
VHL-202ENST00000345392 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
VHL-202ENST00000345392 Q6ZQY7 126 aa12.07□□□□□ -0.48
VHL-202ENST00000345392 NSD1Q96L73 2696 aaPredicted RBP12.07□□□□□ -0.48
VHL-202ENST00000345392 Q6ZVQ6 151 aa12.06□□□□□ -0.48
VHL-202ENST00000345392 X6R8D5 127 aa12.06□□□□□ -0.48
VHL-202ENST00000345392 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
VHL-202ENST00000345392 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
VHL-202ENST00000345392 LOC110117498A0A087WWA1 95 aa12.05□□□□□ -0.48
VHL-202ENST00000345392 NDUFC2-KCTD14E9PQ53 114 aa12.05□□□□□ -0.48
VHL-202ENST00000345392 FAM236DA0A1B0GTK5 79 aa12.04□□□□□ -0.48
VHL-202ENST00000345392 FAM236CP0DP71 79 aa12.04□□□□□ -0.48
VHL-202ENST00000345392 SNURFQ9Y675 71 aa12.04□□□□□ -0.48
VHL-202ENST00000345392 INAFM1C9JVW0 142 aa12.03□□□□□ -0.48
VHL-202ENST00000345392 H7BZZ5 65 aa12.03□□□□□ -0.48
VHL-202ENST00000345392 SPAG11BQ08648 103 aa12.03□□□□□ -0.48
VHL-202ENST00000345392 TRAV7A0A075B6U4 112 aa12.02□□□□□ -0.49
VHL-202ENST00000345392 SCXQ7RTU7 201 aa12.02□□□□□ -0.49
VHL-202ENST00000345392 IGLV6-57P01721 117 aa12.01□□□□□ -0.49
VHL-202ENST00000345392 RMI2Q96E14 147 aa12□□□□□ -0.49
VHL-202ENST00000345392 XAGE1AQ9HD64 81 aa12□□□□□ -0.49
VHL-202ENST00000345392 DEFB135Q30KP9 77 aa12□□□□□ -0.49
VHL-202ENST00000345392 MUC7Q8TAX7 377 aa11.98□□□□□ -0.49
VHL-202ENST00000345392 ATRQ13535 2644 aa11.97□□□□□ -0.49
VHL-202ENST00000345392 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
VHL-202ENST00000345392 A0A0J9YWU9 116 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 WIPF1O43516 503 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 IGHV4-30-4P0DP06 118 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 KLKP1Q107X0 134 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 TM2D3Q9BRN9 247 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 F8WEM9 126 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 HTN3P15516 51 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 C9orf66Q5T8R8 295 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 DIRC1Q969H9 104 aa11.94□□□□□ -0.5
VHL-202ENST00000345392 CXCL6P80162 114 aa11.93□□□□□ -0.5
VHL-202ENST00000345392 SERP1Q9Y6X1 66 aa11.93□□□□□ -0.5
VHL-202ENST00000345392 BCE1O60756 84 aa11.93□□□□□ -0.5
VHL-202ENST00000345392 LYRM9A8MSI8 78 aa11.92□□□□□ -0.5
VHL-202ENST00000345392 DAD1P61803 113 aa11.92□□□□□ -0.5
VHL-202ENST00000345392 CELA1Q9UNI1 258 aa11.92□□□□□ -0.5
VHL-202ENST00000345392 PDE6GP18545 87 aa11.92□□□□□ -0.5
VHL-202ENST00000345392 C6orf48Q9UBA6 75 aa11.92□□□□□ -0.5
VHL-202ENST00000345392 ZNF73O43830 326 aaPredicted RBP11.91□□□□□ -0.5
VHL-202ENST00000345392 TRBV7-4A0A0J9YYF1 115 aa11.9□□□□□ -0.5
VHL-202ENST00000345392 EPM2AB3EWF7 344 aa11.9□□□□□ -0.5
VHL-202ENST00000345392 COX7BP24311 80 aa11.89□□□□□ -0.51
VHL-202ENST00000345392 Q8N9L7 120 aa11.88□□□□□ -0.51
VHL-202ENST00000345392 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.87□□□□□ -0.51
VHL-202ENST00000345392 PKD1L1Q8TDX9 2849 aa11.86□□□□□ -0.51
VHL-202ENST00000345392 ELOF1P60002 83 aaKnown RBP11.85□□□□□ -0.51
VHL-202ENST00000345392 HIGD2BQ4VC39 106 aa11.85□□□□□ -0.51
VHL-202ENST00000345392 LELP1Q5T871 98 aa11.85□□□□□ -0.51
VHL-202ENST00000345392 PRR34Q9NV39 138 aa11.85□□□□□ -0.51
VHL-202ENST00000345392 H3BQ85 93 aa11.83□□□□□ -0.51
VHL-202ENST00000345392 GVQW2A0A096LPI5 108 aaPredicted RBP11.83□□□□□ -0.52
VHL-202ENST00000345392 LINC00336Q6ZUF6 198 aa11.83□□□□□ -0.52
VHL-202ENST00000345392 NREPQ16612 68 aa11.83□□□□□ -0.52
VHL-202ENST00000345392 FP248Q71RG6 208 aaPredicted RBP11.83□□□□□ -0.52
VHL-202ENST00000345392 BPY2O14599 106 aa11.82□□□□□ -0.52
VHL-202ENST00000345392 MIFP14174 115 aa11.82□□□□□ -0.52
VHL-202ENST00000345392 LINC00474Q9P2X8 69 aa11.81□□□□□ -0.52
VHL-202ENST00000345392 VPREB1P12018 145 aa11.81□□□□□ -0.52
VHL-202ENST00000345392 CAMK2N2Q96S95 79 aa11.8□□□□□ -0.52
VHL-202ENST00000345392 TRBV7-6A0A0J9YX20 115 aa11.79□□□□□ -0.52
VHL-202ENST00000345392 Q8NAQ8 132 aa11.79□□□□□ -0.52
VHL-202ENST00000345392 TMEM254Q8TBM7 123 aa11.79□□□□□ -0.52
VHL-202ENST00000345392 SMIM26A0A096LP01 95 aa11.77□□□□□ -0.52
VHL-202ENST00000345392 C3orf84H3BNL1 204 aa11.76□□□□□ -0.53
VHL-202ENST00000345392 Q6ZRU5 148 aa11.76□□□□□ -0.53
VHL-202ENST00000345392 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms