RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 S100A2P29034 98 aa7.42□□□□□ -1.22
SGCA-202ENST00000344627 URB1-AS1Q96HZ7 61 aa7.42□□□□□ -1.22
SGCA-202ENST00000344627 A0A096LNJ9 63 aa7.41□□□□□ -1.22
SGCA-202ENST00000344627 LEPROTL1O95214 131 aa7.41□□□□□ -1.22
SGCA-202ENST00000344627 UBE2AP49459 152 aa7.41□□□□□ -1.22
SGCA-202ENST00000344627 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
SGCA-202ENST00000344627 ZNF22P17026 224 aaPredicted RBP7.4□□□□□ -1.22
SGCA-202ENST00000344627 PRR4Q16378 134 aa7.4□□□□□ -1.22
SGCA-202ENST00000344627 ZNF625Q96I27 306 aaPredicted RBP7.4□□□□□ -1.22
SGCA-202ENST00000344627 IGKV2-28A0A075B6P5 120 aa7.39□□□□□ -1.23
SGCA-202ENST00000344627 IGLV5-39A0A0G2JS06 123 aa7.39□□□□□ -1.23
SGCA-202ENST00000344627 IGKV2D-28P01615 120 aa7.39□□□□□ -1.23
SGCA-202ENST00000344627 AKR1D1P51857 326 aa7.39□□□□□ -1.23
SGCA-202ENST00000344627 IGLV5-37A0A075B6J1 123 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 TSPAN13O95857 204 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 LINC00310P59036 64 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 CTAG1AP78358 180 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 FAM19A2Q8N3H0 131 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 IFI27L1Q96BM0 104 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 MAP1LC3CQ9BXW4 147 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 SND1-IT1Q9HBX3 110 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 ERG28Q9UKR5 140 aa7.38□□□□□ -1.23
SGCA-202ENST00000344627 LCE2BO14633 110 aa7.37□□□□□ -1.23
SGCA-202ENST00000344627 RPL24P83731 157 aaKnown RBP7.37□□□□□ -1.23
SGCA-202ENST00000344627 CHTOPQ9Y3Y2 248 aaKnown RBP7.37□□□□□ -1.23
SGCA-202ENST00000344627 C5orf52A6NGY3 159 aa7.36□□□□□ -1.23
SGCA-202ENST00000344627 CRYGAP11844 174 aa7.36□□□□□ -1.23
SGCA-202ENST00000344627 SNRPEP62304 92 aaKnown RBP7.36□□□□□ -1.23
SGCA-202ENST00000344627 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
SGCA-202ENST00000344627 TYMSOSQ8TAI1 123 aa7.36□□□□□ -1.23
SGCA-202ENST00000344627 ANAPC11Q9NYG5 84 aa7.36□□□□□ -1.23
SGCA-202ENST00000344627 TMA7Q9Y2S6 64 aaKnown RBP7.36□□□□□ -1.23
SGCA-202ENST00000344627 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
SGCA-202ENST00000344627 C20orf202A1L168 122 aa7.35□□□□□ -1.23
SGCA-202ENST00000344627 FABP4P15090 132 aa7.35□□□□□ -1.23
SGCA-202ENST00000344627 LINC00158P58513 81 aa7.35□□□□□ -1.23
SGCA-202ENST00000344627 COX17Q14061 63 aa7.35□□□□□ -1.23
SGCA-202ENST00000344627 A0A087X002 238 aa7.34□□□□□ -1.23
SGCA-202ENST00000344627 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
SGCA-202ENST00000344627 VPREB1P12018 145 aa7.34□□□□□ -1.23
SGCA-202ENST00000344627 SFTA2Q6UW10 78 aa7.34□□□□□ -1.23
SGCA-202ENST00000344627 FAM19A1Q7Z5A9 133 aa7.34□□□□□ -1.23
SGCA-202ENST00000344627 TMEM238C9JI98 176 aa7.33□□□□□ -1.24
SGCA-202ENST00000344627 PET117Q6UWS5 81 aa7.33□□□□□ -1.24
SGCA-202ENST00000344627 HIST1H2BLQ99880 126 aa7.33□□□□□ -1.24
SGCA-202ENST00000344627 PLNP26678 52 aa7.32□□□□□ -1.24
SGCA-202ENST00000344627 PRLHP81277 87 aa7.32□□□□□ -1.24
SGCA-202ENST00000344627 TMEM223A0PJW6 202 aa7.31□□□□□ -1.24
SGCA-202ENST00000344627 H0Y8G0 127 aa7.31□□□□□ -1.24
SGCA-202ENST00000344627 SYS1-DBNDD2H3BUS1 97 aa7.31□□□□□ -1.24
SGCA-202ENST00000344627 KRTAP13-1Q8IUC0 172 aa7.31□□□□□ -1.24
SGCA-202ENST00000344627 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
SGCA-202ENST00000344627 IGKV2D-26A0A0A0MRZ7 120 aa7.3□□□□□ -1.24
SGCA-202ENST00000344627 KRTDAPP60985 99 aa7.3□□□□□ -1.24
SGCA-202ENST00000344627 FAM229BQ4G0N7 80 aa7.3□□□□□ -1.24
SGCA-202ENST00000344627 MEIG1Q5JSS6 88 aa7.3□□□□□ -1.24
SGCA-202ENST00000344627 Q8NDZ9 215 aa7.29□□□□□ -1.24
SGCA-202ENST00000344627 MUC2Q02817 5179 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 M0R378 163 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 DPM2O94777 84 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 C3orf79P0CE67 100 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 SMIM13P0DJ93 91 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
SGCA-202ENST00000344627 LINC01545Q5VT33 79 aa7.27□□□□□ -1.25
SGCA-202ENST00000344627 BOD1L2Q8IYS8 172 aa7.27□□□□□ -1.25
SGCA-202ENST00000344627 HIGD2AQ9BW72 106 aa7.27□□□□□ -1.25
SGCA-202ENST00000344627 NCR3O14931 201 aa7.26□□□□□ -1.25
SGCA-202ENST00000344627 IGKCP01834 107 aa7.26□□□□□ -1.25
SGCA-202ENST00000344627 HERVK_113P61574 105 aa7.26□□□□□ -1.25
SGCA-202ENST00000344627 LINC00304Q8N9R0 145 aa7.26□□□□□ -1.25
SGCA-202ENST00000344627 HERV-K104P63124 156 aa7.25□□□□□ -1.25
SGCA-202ENST00000344627 MIR7-3HGQ8N6C7 128 aa7.25□□□□□ -1.25
SGCA-202ENST00000344627 NDUFA12Q9UI09 145 aa7.25□□□□□ -1.25
SGCA-202ENST00000344627 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
SGCA-202ENST00000344627 LINC00587B1AMM8 73 aa7.24□□□□□ -1.25
SGCA-202ENST00000344627 GHRHP01286 108 aa7.24□□□□□ -1.25
SGCA-202ENST00000344627 PLEKHB2Q96CS7 222 aa7.24□□□□□ -1.25
SGCA-202ENST00000344627 HSBP1L1C9JCN9 74 aa7.23□□□□□ -1.25
SGCA-202ENST00000344627 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
SGCA-202ENST00000344627 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
SGCA-202ENST00000344627 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
SGCA-202ENST00000344627 C3orf22Q8N5N4 141 aa7.22□□□□□ -1.25
SGCA-202ENST00000344627 ETDCA0A1B0GVM5 59 aa7.21□□□□□ -1.26
SGCA-202ENST00000344627 PRYO14603 147 aa7.21□□□□□ -1.26
SGCA-202ENST00000344627 S100A12P80511 92 aa7.21□□□□□ -1.26
SGCA-202ENST00000344627 JOSD1Q15040 202 aaPredicted RBP7.21□□□□□ -1.26
SGCA-202ENST00000344627 SPAG11AQ6PDA7 123 aa7.21□□□□□ -1.26
SGCA-202ENST00000344627 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
SGCA-202ENST00000344627 LEPROTO15243 131 aa7.2□□□□□ -1.26
SGCA-202ENST00000344627 DAND5Q8N907 189 aa7.2□□□□□ -1.26
SGCA-202ENST00000344627 PMCHL2Q9BQD1 86 aa7.2□□□□□ -1.26
SGCA-202ENST00000344627 ZNF706Q9Y5V0 76 aaPredicted RBP7.2□□□□□ -1.26
SGCA-202ENST00000344627 TSPEAR-AS2P59090 65 aa7.19□□□□□ -1.26
SGCA-202ENST00000344627 SPRR4Q96PI1 79 aa7.19□□□□□ -1.26
SGCA-202ENST00000344627 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
SGCA-202ENST00000344627 PPDPFQ9H3Y8 114 aa7.19□□□□□ -1.26
SGCA-202ENST00000344627 TRBV10-3A0A0K0K1G6 114 aa7.18□□□□□ -1.26
SGCA-202ENST00000344627 LGALS3P17931 250 aaKnown RBP7.18□□□□□ -1.26
SGCA-202ENST00000344627 SMCR5Q8TEV8 140 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms