RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 SND1-IT1Q9HBX3 110 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 TP73-AS1Q9UF72 201 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 COL7A1Q02388 2944 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 TTTY13Q9BZ97 58 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 IGKV2D-26A0A0A0MRZ7 120 aa5.32□□□□□ -1.56
HMGCR-202ENST00000343975 A0A1B0GWB2 263 aa5.31□□□□□ -1.56
HMGCR-202ENST00000343975 LINC01620Q4KN68 170 aa5.31□□□□□ -1.56
HMGCR-202ENST00000343975 ETDBQ3ZM63 59 aa5.31□□□□□ -1.56
HMGCR-202ENST00000343975 DAND5Q8N907 189 aa5.3□□□□□ -1.56
HMGCR-202ENST00000343975 TSPEAR-AS2P59090 65 aa5.3□□□□□ -1.56
HMGCR-202ENST00000343975 TSPAN13O95857 204 aa5.3□□□□□ -1.56
HMGCR-202ENST00000343975 C2orf91Q6ZV80 131 aa5.3□□□□□ -1.56
HMGCR-202ENST00000343975 M0QXV9 152 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 TLX1NBP0CAT3 122 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 TAL2Q16559 108 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 SPANXB1Q9NS25 103 aaPredicted RBP5.29□□□□□ -1.56
HMGCR-202ENST00000343975 SPANXCQ9NY87 97 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 TRAV13-2A0A0B4J235 113 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 B5MCH6 92 aa5.29□□□□□ -1.56
HMGCR-202ENST00000343975 A0A096LNI7 61 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 LYRM7Q5U5X0 104 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 NHP2Q9NX24 153 aaKnown RBP5.28□□□□□ -1.56
HMGCR-202ENST00000343975 HIGD1BQ9P298 99 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 SMIM20Q8N5G0 67 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 M0R378 163 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 COX6CP09669 75 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 FUSP35637 526 aaKnown RBP eCLIP5.28□□□□□ -1.56
HMGCR-202ENST00000343975 PSMB2P49721 201 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 LINC00308Q8TCZ7 52 aa5.28□□□□□ -1.56
HMGCR-202ENST00000343975 H7C2G1 150 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 CHTF8P0CG12 524 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 KRTAP10-2P60368 255 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 SPANXDQ9BXN6 97 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 ETDCA0A1B0GVM5 59 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 FAM229AH3BQW9 127 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 NCR3O14931 201 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 Q6ZRP5 223 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 MUSTN1Q8IVN3 82 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 TMEM126AQ9H061 195 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 A0A087WYN8 130 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 SLC25A20O43772 301 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 SDIM1Q6ZPB5 146 aa5.27□□□□□ -1.57
HMGCR-202ENST00000343975 H3BMG7 143 aa5.26□□□□□ -1.57
HMGCR-202ENST00000343975 UBE2AP49459 152 aa5.26□□□□□ -1.57
HMGCR-202ENST00000343975 SCGB1C2P0DMR2 95 aa5.26□□□□□ -1.57
HMGCR-202ENST00000343975 MRPL55Q7Z7F7 128 aaKnown RBP5.25□□□□□ -1.57
HMGCR-202ENST00000343975 NDUFC2O95298 119 aa5.25□□□□□ -1.57
HMGCR-202ENST00000343975 SLPIP03973 132 aa5.25□□□□□ -1.57
HMGCR-202ENST00000343975 C22orf24Q9Y442 160 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 TRBV10-2A0A0K0K1G8 114 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 A4D1N5 150 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 GHRHP01286 108 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 CEND1Q8N111 149 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 PPDPFLQ8WWR9 84 aa5.24□□□□□ -1.57
HMGCR-202ENST00000343975 PLA2G1BP04054 148 aaKnown RBP5.23□□□□□ -1.57
HMGCR-202ENST00000343975 IGKV2-28A0A075B6P5 120 aa5.23□□□□□ -1.57
HMGCR-202ENST00000343975 IGKV2D-28P01615 120 aa5.23□□□□□ -1.57
HMGCR-202ENST00000343975 MT-ATP8P03928 68 aa5.23□□□□□ -1.57
HMGCR-202ENST00000343975 FXYD2P54710 66 aa5.23□□□□□ -1.57
HMGCR-202ENST00000343975 DIRC1Q969H9 104 aa5.23□□□□□ -1.57
HMGCR-202ENST00000343975 K7ERJ3 54 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 KRTAP10-1P60331 282 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 RPL13AP40429 203 aaKnown RBP5.22□□□□□ -1.57
HMGCR-202ENST00000343975 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 RPL37AP8A6NKH3 93 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 SCXQ7RTU7 201 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 FAM19A1Q7Z5A9 133 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 SPACA4Q8TDM5 124 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 PLA2G2DQ9UNK4 145 aa5.22□□□□□ -1.57
HMGCR-202ENST00000343975 LOC107984156A0A0G2JMH3 177 aa5.21□□□□□ -1.58
HMGCR-202ENST00000343975 RPL28P46779 137 aaKnown RBP5.21□□□□□ -1.58
HMGCR-202ENST00000343975 C1orf137Q5JT78 98 aa5.21□□□□□ -1.58
HMGCR-202ENST00000343975 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.58
HMGCR-202ENST00000343975 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
HMGCR-202ENST00000343975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.21□□□□□ -1.58
HMGCR-202ENST00000343975 DNAL4O96015 105 aa5.21□□□□□ -1.58
HMGCR-202ENST00000343975 PHF5AQ7RTV0 110 aaKnown RBP5.21□□□□□ -1.58
HMGCR-202ENST00000343975 TRAV23DV6A0A075B6W5 121 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 C9orf129Q5T035 196 aaKnown RBP5.2□□□□□ -1.58
HMGCR-202ENST00000343975 LINC00167Q96N53 147 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 PRYO14603 147 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 RPL37AP61513 92 aaKnown RBP5.2□□□□□ -1.58
HMGCR-202ENST00000343975 CIRBP-AS1Q8TBR5 109 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 VPREB1P12018 145 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 XGP55808 180 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 REG3GQ6UW15 175 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 PLAC8Q9NZF1 115 aa5.2□□□□□ -1.58
HMGCR-202ENST00000343975 HAMPP81172 84 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 TRBV10-3A0A0K0K1G6 114 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 HIGD2AQ9BW72 106 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 FAM168BA1KXE4 195 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 TEN1Q86WV5 123 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 LINC00528Q8N1L1 170 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 CDIP1Q9H305 208 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 PPDPFQ9H3Y8 114 aa5.19□□□□□ -1.58
HMGCR-202ENST00000343975 A0A0B4J2C4 111 aa5.18□□□□□ -1.58
HMGCR-202ENST00000343975 A0A1W2PNN7 141 aa5.18□□□□□ -1.58
HMGCR-202ENST00000343975 SMR3BP02814 79 aaPredicted RBP5.18□□□□□ -1.58
HMGCR-202ENST00000343975 COX7BP24311 80 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms